Basic Information

Insect: Tillus elongatus
Gene Symbol: ham
Assembly: GCA_964006375.1
Location: OZ023268.1:25809561-25835830[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.18 34 7.5 1.4 2 23 42 64 41 64 0.94

2 9 0.0012 0.21 14.4 2.6 1 23 71 94 71 94 0.93

3 9 1.3e-08 2.4e-06 30.0 3.1 1 23 100 122 100 123 0.96

4 9 2e-06 0.00036 23.1 1.7 1 23 129 151 129 151 0.95

5 9 4.9e-05 0.009 18.7 5.0 1 23 157 179 157 179 0.99

6 9 0.00098 0.18 14.7 0.7 2 21 187 206 186 207 0.95

7 9 1.7e-08 3.1e-06 29.6 0.7 1 23 547 569 547 569 0.98

8 9 2.2e-06 0.0004 23.0 1.6 1 23 575 598 575 598 0.97

9 9 1.7e-05 0.0031 20.2 3.4 1 23 604 626 604 626 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.18	34	7.5	1.4	2	23	42	64	41	64	0.94
2	9	0.0012	0.21	14.4	2.6	1	23	71	94	71	94	0.93
3	9	1.3e-08	2.4e-06	30.0	3.1	1	23	100	122	100	123	0.96
4	9	2e-06	0.00036	23.1	1.7	1	23	129	151	129	151	0.95
5	9	4.9e-05	0.009	18.7	5.0	1	23	157	179	157	179	0.99
6	9	0.00098	0.18	14.7	0.7	2	21	187	206	186	207	0.95
7	9	1.7e-08	3.1e-06	29.6	0.7	1	23	547	569	547	569	0.98
8	9	2.2e-06	0.0004	23.0	1.6	1	23	575	598	575	598	0.97
9	9	1.7e-05	0.0031	20.2	3.4	1	23	604	626	604	626	0.99

Sequence Information

Coding Sequence: ATGAGAAGCTCACCTAGTCTACAAAATTGGAAAATTTATAGATACATCCGTAAAGATTCCGCTTCTCAACACAGCGGGACAGTTGACGAACGGGAAGATGATGAAGATGACGAAAACGAGAGCAGATGCTGTGTTTGCGATCACCCGTTTAATGACATAGACAAGTTAGATGAACATTTGATTATAAAGCATAACTACAGACGAGACGAATTTAGATGCGATCAGTGTCCCAAAGCCTATTCTCACAGGCCTTGCCTTATTAGACACAGAGGAGTATCACATGGAGAACACCGGAAGTATCATTGTGAAAACTGTCCTAAGgtaTTCACCGATCCCAGCAATCTCCAAAGACATATAAGGACACATCACGTTGGTGCTAGATCACATGCTTGCCCTGAATGTGGAAAAACCTTTGCCACTTCTTCGGGGTTGAAGCAGCATACTCACATACATTCTTCAGTGAAGCCTTTTCAGTGTGAAGTTTGTTTTAAGGCCTATACTCAATTCTCCAACCTCTGTCGACACAAACGAATGCATGCTGATTGTCGAATGCAGATCAAATGTGTTAAGTGTGGTCAATCCTTCTCTACGGTGACATCACTCTCAAAACACAAGCGCTTTTGCGATTCAACAACACCAAGCTCACCCCTCACCTCACCTCCACAACATTCCCTTGCTCCGATGGCAGCAAACAATCCCTTTTCTATGTACAGACCTCCAGCTTGTCACCTGCCTTTTTTCCCTCCGCACTTTCCTTCCTATCCCCAATTATTTCACCATTCTGGTCCCCCACCTCATTTTATAAACCCGTTGCTCTTTAATCATCTCCACAAGCGCAAAACAGAAGAGTCACAAATGAACATAcccttaaaaaaattaagaagtTTGAGCCCCGAGAGACATTCACCTCCTTCAAACTTAGACAGATTTACGCCTCCAAGAGTACCTTCAGTCACAGCCAAAGTTAGCCCCCCAACAGCTGAAGAAGCTAACTTAACACCTTCACCTGCAAGACCTAATAATATACTCAGCAACCCAAGGGACCAAATTGTCACGCAAACACAAAATAATACATCCGATGAAGATGATAGCTACCCCAAAGACTTGTCGAAGTGTAGTGACACAAATAGATCATCCAGACCACCTTTTCTTTGTAGCGAAGAAGGTGAGCAACCTTTAGATTTAAGTGTAGCTCGGAAGAGGTGTCGGCTTGTCTCAGATGAAGACGACGATTATGCTAGtatgaaaaaacacaaaaaccaagAGGAAGTCAGGGAGCAAGATCCACCGTTAAGCTCGCCTAAGAAAGAGAAAGATGCGGAAATTGAAATCGTGGAAGTTGAAGATAAGAAATGTGTTTCTTTTGATACGACCTCAACAACACCAACAATGGCTTACCCAAGACCGATCCACCCGATACTGTTAGAGATGTATCGGCCAAATTTTCACAACTTTCAAACCCAAAGCAGCGATAGATTATTACCCTCGCCTTTCGGTCCACCTAGATTCCCATTTCTGAATTCTCTGCAACCTCAGCGTAACTTCGATTTGCTAAGACCAGGCCTGCAGAGCTTTGGCGGTGTCAAACCGTTCCATGATGTAATGGCTCAACAGACGCAAGGGAAAATCAAAGATCGTTATGCTTGTAAATTCTGCGGTAAGGTTTTCCCACGATCTGCAAATCTTACTAGACATTTGCGTACCCACACAGGAGAACAGCCTTACAAATGTAGATACTGCGAAAGATCTTTTAGCATATCGAGTAACCTTCAAAGGCATGTAAGAAATATACATAATAAGGAAAAGCCGTTTAAATGCCCTTTATGCGAACGCTGCTTTGGCCAGCAAACAAACTTAGACAGGCATCTAAAAAAACACGAAGCTGATGATGGTAGTGGTGGTGTTGCTGTTGCAGATTCTCCAGGAAGCAGCAATGAGAATGAAAGAGAAGACGCTTATTTCGACGAAATTCGATCGTTTATGGGTAGGGTCACATCGTCTGCACCTGAAGTATACAACCAAACGAGGTTGTATACACCACCGTCACATAGTATCATTGATGTGGTCGGGAAAGACGAAGAAGACTCGGAAACTTATTCAGAAGGAACACCACCAGAAgatttttctgtaaaaaattgTGATAAGAAAGTAAAACAGCTCAATGATGAAATGCTTAACAATAATGatcaaacaatagaaataacaacTTAG
Protein Sequence: MRSSPSLQNWKIYRYIRKDSASQHSGTVDEREDDEDDENESRCCVCDHPFNDIDKLDEHLIIKHNYRRDEFRCDQCPKAYSHRPCLIRHRGVSHGEHRKYHCENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTTPSSPLTSPPQHSLAPMAANNPFSMYRPPACHLPFFPPHFPSYPQLFHHSGPPPHFINPLLFNHLHKRKTEESQMNIPLKKLRSLSPERHSPPSNLDRFTPPRVPSVTAKVSPPTAEEANLTPSPARPNNILSNPRDQIVTQTQNNTSDEDDSYPKDLSKCSDTNRSSRPPFLCSEEGEQPLDLSVARKRCRLVSDEDDDYASMKKHKNQEEVREQDPPLSSPKKEKDAEIEIVEVEDKKCVSFDTTSTTPTMAYPRPIHPILLEMYRPNFHNFQTQSSDRLLPSPFGPPRFPFLNSLQPQRNFDLLRPGLQSFGGVKPFHDVMAQQTQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGGVAVADSPGSSNENEREDAYFDEIRSFMGRVTSSAPEVYNQTRLYTPPSHSIIDVVGKDEEDSETYSEGTPPEDFSVKNCDKKVKQLNDEMLNNNDQTIEITT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -