Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023266.1:132071314-132092871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0076 1.4 11.8 0.7 1 22 258 279 258 282 0.90

2 12 1.7e-05 0.003 20.2 1.1 1 23 287 309 287 309 0.99

3 12 3.3e-06 0.00061 22.4 4.7 3 23 317 337 316 337 0.97

4 12 4.6e-05 0.0084 18.8 1.8 1 23 343 366 343 366 0.98

5 12 0.0038 0.7 12.8 1.8 3 23 373 393 372 393 0.97

6 12 0.0014 0.26 14.1 0.1 1 23 408 430 408 430 0.99

7 12 0.012 2.2 11.2 0.7 2 20 454 472 454 474 0.94

8 12 0.00029 0.053 16.3 0.8 1 23 484 506 484 506 0.97

9 12 0.19 35 7.5 4.5 1 23 515 537 515 537 0.98

10 12 6e-05 0.011 18.5 1.1 1 23 543 565 543 565 0.98

11 12 8.2e-07 0.00015 24.3 0.2 1 23 571 593 571 593 0.98

12 12 7.6e-05 0.014 18.1 3.5 1 23 599 622 599 622 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0076	1.4	11.8	0.7	1	22	258	279	258	282	0.90
2	12	1.7e-05	0.003	20.2	1.1	1	23	287	309	287	309	0.99
3	12	3.3e-06	0.00061	22.4	4.7	3	23	317	337	316	337	0.97
4	12	4.6e-05	0.0084	18.8	1.8	1	23	343	366	343	366	0.98
5	12	0.0038	0.7	12.8	1.8	3	23	373	393	372	393	0.97
6	12	0.0014	0.26	14.1	0.1	1	23	408	430	408	430	0.99
7	12	0.012	2.2	11.2	0.7	2	20	454	472	454	474	0.94
8	12	0.00029	0.053	16.3	0.8	1	23	484	506	484	506	0.97
9	12	0.19	35	7.5	4.5	1	23	515	537	515	537	0.98
10	12	6e-05	0.011	18.5	1.1	1	23	543	565	543	565	0.98
11	12	8.2e-07	0.00015	24.3	0.2	1	23	571	593	571	593	0.98
12	12	7.6e-05	0.014	18.1	3.5	1	23	599	622	599	622	0.97

Sequence Information

Coding Sequence: ATGGATGAAGAAATTTGCTTTGAAGCCTTCCAACATATTTGCAGGACTTGTTTAGCTTATGCTCATCTATATCCGATAAATGAAATTGAAATGGAGGATGGAAAGCTTAATAAAATATTACTGTGCTTTGAACTGTTGGAGTTTAGTAATGAAGAGATTAAAATGCCACAAAACATGTGCAAAAGCTGCATACTTGAAGTATACAAAATGTACCGTTTTATTAAAGTTTGTCagaaaactcaaaaaattctCAAGCACACATTGTTAAGCTCTTCAGAGAAAGAAACTgatattaatattataaatgcTGCAGATATAAAGCACAGGGAAAATGCAGATGGACATATTGAAAAACAGACAAATGATGCTGCAGCTGGTGAACTTGGGAGCTTTGAAGATGAATCTATCGAAACAATATGGAGTTGTGATGATAGAAGTCTCAGTGTTATTGAAAATAACTGTTGTAAAACTGAAGAAGTTATGGAAGTCTCCACAGACATTGCTGAAAATACAACTGTTTCTGTTGCAACGGATAATATTGAAGTTACAACATATAATCCTGATATTAAAATACAGAATAACAATGTCGCAGTAGATAGTGCTGAGGCTGAAGCATTAatagacaaaataaaacaaattaagtCTGAAATAACCAGTATCCAAACCTTACCTTCAGTTCATAAGGTAACATCTAGATTTAAAAGGAAAGTACCAAATAACAGTTCAAGTAGAGTTTCAACAATAAATAGGATAAGAATTGAAGGTCCACCTTTCAATTGTTCTGAATGCAAGGAGTCAtttgatgtttatatattattAAGGAAACACTGGCAGATGTATAATCATCATCCGAAAAATTTCAAGTGTACTTACTGCTTAGTTGCTTTTAAAAGTAACAGTGTCTTGCAGCAGCATATTCGGACTCATACAGGTGAAAAGCCAAATATTTGTAATATATGTAATAGAAGCTTTAATCACCGCAGCAATTTTAGAAGGCATATGTATACACATTCAGATTCGAAGCGGTATAAATGTAATGACTGTGAGCAAGGTTTTAATAGATTAGAATTCTTAAGAGATCACCAAAGAAAATACCATTCTGGAGAGAAGCTGTTATGTCCTTACTGTGGTAAGGAATTCACGTGTCAGGGTACTCTAAAACTTCATGAAAAACAGCATGTCTGTCACAAATCTGAAGTAGTAATCGATGCTAACATTCCATATCAATGCAAAACTTGTGGAAAAATATTAGCTTCAGAAGAAATACTCAATCAGCACATGCAGGTACATGTGAAGAAAAAATcacagaagaaaacaaagaaaacggGCGATACAAAATATAAGGAACGTAAAGATCCGGTATGTCAGCACTGCCAGtcaattttcaaaaattcttatgaacttagATTACACAGACTAGATTCATCATGCAGTCAGTTTGTATCTCGCTTCGACTGTTCACAATGTGATAAGTTTTTCATTACATATGGGGCTCTGTATTCACATTTGAAGCTCCATAAAGAAGCAAGTCAAAATAATGTGTATGAATGTGAAACATGCCATGAACAGTTTTATAAAGAACGCCGATATAAGGACCATGTTAAACGGCATACACGAGAGCGAAGGTATATTTGTCAAGACTGTGGGCAAGGGTTTTATGTAAGACTACATTTAGACAATCATATGAGGACTCATACAGGTGAACGACCATTTACATGTGAAATTTGTCAGAAGGCCTTCGCTCTTAAGGTTAATTTAACGGTTCATATGAGGATACACACAAACGTTAAGCCATACAAATGTAGTATTTGCGGGCATGATTTTAGAGATGTTAGTAGTCTGAGAAAACATTCTAAGAAGTATCATAATGTGGATATTACTTATGATGTGAAAAGTGAGAGTATCATataa
Protein Sequence: MDEEICFEAFQHICRTCLAYAHLYPINEIEMEDGKLNKILLCFELLEFSNEEIKMPQNMCKSCILEVYKMYRFIKVCQKTQKILKHTLLSSSEKETDINIINAADIKHRENADGHIEKQTNDAAAGELGSFEDESIETIWSCDDRSLSVIENNCCKTEEVMEVSTDIAENTTVSVATDNIEVTTYNPDIKIQNNNVAVDSAEAEALIDKIKQIKSEITSIQTLPSVHKVTSRFKRKVPNNSSSRVSTINRIRIEGPPFNCSECKESFDVYILLRKHWQMYNHHPKNFKCTYCLVAFKSNSVLQQHIRTHTGEKPNICNICNRSFNHRSNFRRHMYTHSDSKRYKCNDCEQGFNRLEFLRDHQRKYHSGEKLLCPYCGKEFTCQGTLKLHEKQHVCHKSEVVIDANIPYQCKTCGKILASEEILNQHMQVHVKKKSQKKTKKTGDTKYKERKDPVCQHCQSIFKNSYELRLHRLDSSCSQFVSRFDCSQCDKFFITYGALYSHLKLHKEASQNNVYECETCHEQFYKERRYKDHVKRHTRERRYICQDCGQGFYVRLHLDNHMRTHTGERPFTCEICQKAFALKVNLTVHMRIHTNVKPYKCSICGHDFRDVSSLRKHSKKYHNVDITYDVKSESII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -