Telo016442.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:320859776-320861737[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00032 0.059 16.2 1.1 2 23 212 234 211 234 0.97 2 15 0.0028 0.51 13.2 4.5 1 23 240 263 240 263 0.97 3 15 0.0052 0.96 12.4 6.1 1 23 269 292 269 292 0.97 4 15 0.0018 0.33 13.8 4.6 1 23 298 321 298 321 0.97 5 15 0.00042 0.077 15.8 2.8 1 23 327 350 327 350 0.96 6 15 0.00049 0.089 15.6 3.2 1 23 356 379 356 379 0.97 7 15 0.0039 0.72 12.8 3.4 2 23 386 408 385 408 0.96 8 15 3.9e-06 0.00072 22.2 1.5 1 23 414 437 414 437 0.98 9 15 0.00094 0.17 14.7 1.0 2 23 444 466 443 466 0.96 10 15 0.0038 0.7 12.8 4.2 1 23 472 495 472 495 0.96 11 15 0.00089 0.16 14.8 3.4 1 23 501 524 501 524 0.97 12 15 0.0049 0.9 12.4 3.5 2 23 531 553 530 553 0.96 13 15 3.9e-06 0.00072 22.2 1.5 1 23 559 582 559 582 0.98 14 15 0.015 2.7 10.9 5.6 2 23 589 611 588 611 0.95 15 15 0.00038 0.069 15.9 1.0 1 23 617 640 617 640 0.98
Sequence Information
- Coding Sequence
- ATGAGTGTGAACAAGGAGAGCCTGCTTTGTGATTCCAAGTGTAAAACAGTTCACAGAAGTGACTGCATATATAGCGATGACGACATCTTCGTAGATGGCTGTGATACTAAAGAGGAAGATTTACTACCTAAACAGGAACAAATCTCTGAGCATCAGTGGAGAGAGACAATGGAAATTAAACACAACATTGAAAATATGCCTTTTACTATTAAAGTGGAGGAGATGGAAGGACAGTGTTTAGAGGAACCAAGGCATCACTTTGTAGGTGAAGTGAGCCAGGAAGAAACTGGGAGTTTCGAAGCTGTTACAGGTGTAAGCATAATTGATGAAGAAAAGAAAAATGTGTTTATTAAAAGTGAAATGATAATagaagaatttaaaattgaaacagTCGACCACGGCTGCACAGGTCTCAGTAATCATGACTTTGTCGATGTGAAGGATGTATTAGTGAAAAATAAATTAGATACAAATATAAAAGACAACGCAAAAAGTTTTTACAATTGTAACACAGACGATTACAAAACTGCCTGGAAAATGGACCTACCACAACACATACAGTCAAAGTACATTgaagaaaaaccttttaaatccTATCATATGGGGGCAGAACATTGTGAAAAGACTCGtattaaatgtgatcagtgtgattattgtactgttacagAGTCTCAGTTAACACTTCACATAATaacaagacacagtgaagaaaggccttataaatgcgaccagtgtgattattgtactgttaaaAAGTATAAGTTAACACAACATGTAATgtcaagacacagtgaagaaaggccttttaaatgcgATCAGTGTcattattgtactgttacaaaATTCCAGTTAGCACAACACCAACAAGTAAAgcacagtgaagaaaggccttttaaatgcgatcagtgtgattattgtactgttacaaagtTTCAGTTAACACTACACCGAAAAgtaagacacagtgaagaaaggccttttcaatgtgatcagtgtgattattgtactgttacaaagtATTGGTTAACACAACACCTAAAAGCAAGACACTGTGAAGGAAGGCCTTTCAAATGTGATCAGTGCGATTATTGTGCTGTTAGAAAGGCTGAGTTAACACACCACATAATGTCAAGACACAGTAAAGAAAGGCCTATTAAATGTGATCATTGTGATTATCGTACTATTACAAGGTCTCGCTTAACGCAACACCGAAAAGTAAGACACAGTggagaaaagccttataaatgtgatcagtgtgattatagtactgttagaAATGATCAATTAACACGTCACATAAAATCAAGACACAGTAAAGAAAGGCCTgttaaatgtgatcaatgtgattaTTCTACTGTTACAAAATTTCAGTTAGCACAACACCGAAAAGTaaaacacagtgaagaaaggccttttaaatgtgatcagtgtgattattgtactgttacaaagtATCGGTTAACACAACACCTAAAAGCAAGACACTGTGAAGGAAGGCCTTtcaaatgtgatcaatgtgattaTTGTGCTGTTAGAAAGGTTGAGTTAACACACCACATAATGTCAAGACACAGTAAAGAACGGCCtattaaatgtgatcagtgtgattattgtactgttacaagGTCTCGGTTAACACAACACCGAAAAgtaagacacagtgaagaaaagccttataaatgtgatcagtgtgattatagtactgttagaAATGATCAATTAACACGTCACATAAAATCAAGACACAGTAAAGAAAGGCCTgttaaatgtgatcaatgtgattattgtactgttacaaagtGTCAGTTAATACGACACCGAAAATTAAGACACcgtgaagaaaggccttataaatgtgatcagtgtgattatagtgctGTTAAAAATAatcagttaacacaacacataaaatCAAGACACAGTAAAGAAAGCCCTGTTGAAGGTGGTCCAAAGGTTCTGTAA
- Protein Sequence
- MSVNKESLLCDSKCKTVHRSDCIYSDDDIFVDGCDTKEEDLLPKQEQISEHQWRETMEIKHNIENMPFTIKVEEMEGQCLEEPRHHFVGEVSQEETGSFEAVTGVSIIDEEKKNVFIKSEMIIEEFKIETVDHGCTGLSNHDFVDVKDVLVKNKLDTNIKDNAKSFYNCNTDDYKTAWKMDLPQHIQSKYIEEKPFKSYHMGAEHCEKTRIKCDQCDYCTVTESQLTLHIITRHSEERPYKCDQCDYCTVKKYKLTQHVMSRHSEERPFKCDQCHYCTVTKFQLAQHQQVKHSEERPFKCDQCDYCTVTKFQLTLHRKVRHSEERPFQCDQCDYCTVTKYWLTQHLKARHCEGRPFKCDQCDYCAVRKAELTHHIMSRHSKERPIKCDHCDYRTITRSRLTQHRKVRHSGEKPYKCDQCDYSTVRNDQLTRHIKSRHSKERPVKCDQCDYSTVTKFQLAQHRKVKHSEERPFKCDQCDYCTVTKYRLTQHLKARHCEGRPFKCDQCDYCAVRKVELTHHIMSRHSKERPIKCDQCDYCTVTRSRLTQHRKVRHSEEKPYKCDQCDYSTVRNDQLTRHIKSRHSKERPVKCDQCDYCTVTKCQLIRHRKLRHREERPYKCDQCDYSAVKNNQLTQHIKSRHSKESPVEGGPKVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -