Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023266.1:173393565-173418990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00019 0.035 16.9 1.8 3 23 194 215 193 215 0.97

2 19 0.04 7.4 9.6 3.7 1 23 387 410 387 410 0.92

3 19 0.25 46 7.1 0.3 1 23 446 469 446 469 0.91

4 19 0.00017 0.032 17.0 0.6 3 23 539 559 537 559 0.97

5 19 1.1 2e+02 5.0 0.6 1 23 577 598 577 598 0.94

6 19 0.0063 1.2 12.1 2.2 2 23 602 623 601 623 0.95

7 19 0.0017 0.32 13.9 0.1 3 23 654 674 653 674 0.97

8 19 0.65 1.2e+02 5.8 0.2 6 23 702 720 697 720 0.91

9 19 0.14 27 7.8 0.5 2 23 732 753 731 753 0.96

10 19 0.00026 0.048 16.5 7.3 1 21 795 815 795 817 0.95

11 19 0.22 41 7.2 2.2 3 23 839 860 839 860 0.92

12 19 4.8e-05 0.0089 18.8 2.1 1 23 883 905 883 905 0.98

13 19 0.0015 0.27 14.1 0.1 2 23 921 943 920 943 0.94

14 19 0.001 0.18 14.6 0.0 1 23 964 986 964 986 0.94

15 19 4.7 8.7e+02 3.1 0.1 1 23 1019 1042 1019 1042 0.93

16 19 0.12 22 8.1 2.4 2 23 1053 1074 1053 1074 0.94

17 19 1.6e-05 0.003 20.2 0.3 1 23 1087 1110 1087 1110 0.98

18 19 4.7e-05 0.0087 18.8 2.9 1 23 1118 1140 1118 1140 0.99

19 19 0.0025 0.46 13.4 0.1 1 23 1154 1177 1154 1177 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00019	0.035	16.9	1.8	3	23	194	215	193	215	0.97
2	19	0.04	7.4	9.6	3.7	1	23	387	410	387	410	0.92
3	19	0.25	46	7.1	0.3	1	23	446	469	446	469	0.91
4	19	0.00017	0.032	17.0	0.6	3	23	539	559	537	559	0.97
5	19	1.1	2e+02	5.0	0.6	1	23	577	598	577	598	0.94
6	19	0.0063	1.2	12.1	2.2	2	23	602	623	601	623	0.95
7	19	0.0017	0.32	13.9	0.1	3	23	654	674	653	674	0.97
8	19	0.65	1.2e+02	5.8	0.2	6	23	702	720	697	720	0.91
9	19	0.14	27	7.8	0.5	2	23	732	753	731	753	0.96
10	19	0.00026	0.048	16.5	7.3	1	21	795	815	795	817	0.95
11	19	0.22	41	7.2	2.2	3	23	839	860	839	860	0.92
12	19	4.8e-05	0.0089	18.8	2.1	1	23	883	905	883	905	0.98
13	19	0.0015	0.27	14.1	0.1	2	23	921	943	920	943	0.94
14	19	0.001	0.18	14.6	0.0	1	23	964	986	964	986	0.94
15	19	4.7	8.7e+02	3.1	0.1	1	23	1019	1042	1019	1042	0.93
16	19	0.12	22	8.1	2.4	2	23	1053	1074	1053	1074	0.94
17	19	1.6e-05	0.003	20.2	0.3	1	23	1087	1110	1087	1110	0.98
18	19	4.7e-05	0.0087	18.8	2.9	1	23	1118	1140	1118	1140	0.99
19	19	0.0025	0.46	13.4	0.1	1	23	1154	1177	1154	1177	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTTAGCGATTGGAAATTTTACATCATGTTGCAGGCTCTGCTTGTCAGACAAGGTTGATGCTTTGAAGCCTCTTTTCGGTGTTTCCGTCGATGATAAGACTTTACCAGAGAAGATTTCAGCTTTCGTCGAAGTTAAGGTAACATCGAACGACAAAATCACTACGATGATATGTAACCAGTGCATTATAGTTGTTAACACCTGGCAAGTTTTCAAGAAATCTTGTGGTGATAACCAAGGCAAACTGAAGAATTGGCTACAATTATGGGTGACACAACAGGAGTTGGCAGATgtgTCACTACAAATAAAAGAAGAGCCGTTGGACGAGACCATCAGGCTTGGTGAACATACTGTAGAGATTGATGACGATGCTGAGCAAGATCCATTAAGCATATCGACTGTTATGGTGAAGGCAGAACCAGTTGATAATGATGAACAGGAAGTTCCTCACCCTCTTGAGGTCAATGAACTTCCACCAGAGTTGACTAGATTTGATTGTGATGGTCAAATGAATACAGAAGAACAATCAGTTATTACCAATCATGTTTCAGATGAAATTGATGTAAACAAATTGTGTAAGATTTGTAATAAAACGTTTAGTACAATATCGAACAGAAGGAAGCATGAAAGGGTAATGCATGGTACTGCAAAGCAGACTGGGGAATTTGAGAACCATAAGGGTGAGCTCCCAGAAGATGATGGATCGCAAAACTCCATTGAATCACAAACTGACAGAGAAGTAGCAACTGTAAAtgcatcacaaaaagcaatagaACCCACCAAGGAGAAAATTCAGTTCGCTGCAGGTTTGAAACTCTTCCAGAACTCCACGCCGCCAATTTCACATGAAAATCTATCCAAAATCGAAGTTAGTTATGCGGAAAAATGTAAAGCGATGGTGGGCATGTATAAAACATTAATTTGTGCCTGTCACAATGTCCAACATCCTAACCTAAAAGGTCTTTTGTCTCATCTGAGAGCCTTGCGTATCTGGTTTCCTGTGTTCACCTGCTACAACTGCATGATCACCTTTACCGATAGGTCTTCTCATTATAAGCACAATTCCCGATGCCCTAGGGCACCACTAGAAACACTGTCTACATTATCTAATCTGAGAAAACGCAGCGAAGTAAAAACTCGCTTATACCAGAATTACCAGTGCACTAAATGTAAATTCATGTACAGTTTCCATGATGATTTCACTAAACATGTGGATGAAGAGCATGTGCCGGAAGATGACGAAGACAAACCGTACAGATGTTTATGTAAAAAAGAATTTACAGAAGTTGTAGATTACAAAGAACACATATACCATTCTTGCTATGTCTATTTCTATTGCGATATTTGTTTCGTTACCACTAATACAGTCGATGAGTTCCAGAAACACGCCTCTGAAGTACACGATAATTCAGAAGGGTTCGTTCTGTTGCAAGACGACAACTACAAGAAGAGAAAACCAATAGAAAAACATGAAACTGATGAGAATCTGATAACCACAGGTAAAAGAAAGAGCACGTTCTATAACAAGCTCGTAATCGAGCCTGAAGATGAATTTGGCACACCACCTCCTAAAAAATCAAACGTATCTCCCAGTACCAAGCCAACAATATGCCCGGTATGCTCCAAGCAATACTCAACTTATGCCAATATGATGCGGCATTATAGATCACATGCCGAGTCCGGGTTTCAGAATGGTGAAGAGTATGAACAAGAAGATTCACTATATTGTTGCCCTGATTGTCGTGGAATGTTCACCGCTGAAGAATGGGAATCCCACAAGGAAAGCCACGAGAAATGTACTTGCAGCGAATGCGGTAAGTTGTTCCAGTTCCAGTCGGAATTGGATCAACACAGAAGCGTACATTTGAATTTGAAGTTGTATCGAGACTCCAAAACCAGCACCTACAAAAGCCAGATGTTGAGCCCCAATTCCGAACAAACCGTAATCGTTTTATGTGAGGTCTGCGATGCTATTTTCAAGTCAAAAGAAGAACTCAAAGAACATAAATTGATACATGAGAATAATGTTATTAAGACAGAGATTCAGATTAAAAAGGAGGTGCTGGATGATGAGGAAAAGAGGTATCAATGTATCCCATGCAACAAGGTGTACTCCGGATACAGTGGTTTATGGGAACATAACAGGAAAAAGCATCCAGAAGCCACCATGTCCACTAACTTCCCAAAAAAATGCAATGAATGTGATAAAGTACTGAATACCGGAGGTTCCTGGTACATGCACAAACAGATGCATGAGAGGATAGCTCAGACAATTGCGGGCAACTCTCCGGTACCACAGCCCAAACCTACTCGTGCAAAACGAAGCAATGTCGATGGAGATGAAGACGATAATGGTAACGATGAAGACGAATCATATTTCACTTGCAAGAGATGCTTTAAAGTTTTCTCGACAAAATACAACTTGAAGAACCACATGAAATGCCATGGAATAAATTTAGCTTCAACAACCAAGGCAAACACTAAATCAAAAAGCCACAAGAAAGTCTGGTGTGATGTTTGTCACGTTTCGTGTGATAGTAACGAAGCCTTGAAGAAACATAAAGAAGAAGAGCACAGCCAACAACTATCGAATGACGAACCTGAAGTTGATCCGATGTTCGAATTGAAAAATCCATTCATATTCACTTGCGATGTATGTACCCGTACTTTCACCACGAAGATCGCTTTGAAGAAACACAAAGAAAGACACACCCAAGAGGAAGAAATGCCTGTTGTAAAGAAACCAGTATATGTTTATTGCAAATACTGCAAGATTCCTTTCGCAACCGTAGATCTCCTCAATAATCACATGGTGTCCGAACACAATGAAGAATCGGCAAAACAGAAGGCGCAACAACAACAGCAGCCACAGAAATTGAAACAGTTTGCTTGTAATGTTTGCAAAAAGGCATTTATTTCTGCGGCAGCTCTGTATGCACATCAGGGCTGGCATAAGCGAGGAAAGGTGGAAAAACAAATTAAAACGCAAGAAAAACTGTTCAGGAAGATGGTTACCAACTTGGCCAAGCCACAGACGCAGACTGTACAGTTCCAGTGCTCTACTTGTCTTGTGCAGTTACCAAACGATACAGCCTTACAGATCCATATCCTTGAGAAACATAGAAACGTCAATACTGTTATTTTACCACCCAAATGCCAACCGTGCAATCAAGATTTCACATCGCAGGAAGAATACGAACACCACAAACGATTGCATGAAGTAGTTGAGAAACAGCAGAAATTCAATAAGGGTTTCCCATGTAAGTTTTGTCCTGCAGCTTTTAGTAGATCAGACACGTTGAACACGCACGTGAGAACCATTCATAAGGAGCATGTCCAGGACGATTATAGATGCAATCACTGTGATAGAACCTTCGATAAACAGATGTCTTTGAGTATTCATCTTAAAGTGCACGAGAAACAGAAAGGTTCAGTCACTTCCAGCAAGCCGCTGTTCTCATGCTCTATCTGCAATATGGGCTTTGATTTACCAAAGGATCTGAGGGCACATACAATCAAAGCCCATCCTTTCTGA
Protein Sequence: MSELAIGNFTSCCRLCLSDKVDALKPLFGVSVDDKTLPEKISAFVEVKVTSNDKITTMICNQCIIVVNTWQVFKKSCGDNQGKLKNWLQLWVTQQELADVSLQIKEEPLDETIRLGEHTVEIDDDAEQDPLSISTVMVKAEPVDNDEQEVPHPLEVNELPPELTRFDCDGQMNTEEQSVITNHVSDEIDVNKLCKICNKTFSTISNRRKHERVMHGTAKQTGEFENHKGELPEDDGSQNSIESQTDREVATVNASQKAIEPTKEKIQFAAGLKLFQNSTPPISHENLSKIEVSYAEKCKAMVGMYKTLICACHNVQHPNLKGLLSHLRALRIWFPVFTCYNCMITFTDRSSHYKHNSRCPRAPLETLSTLSNLRKRSEVKTRLYQNYQCTKCKFMYSFHDDFTKHVDEEHVPEDDEDKPYRCLCKKEFTEVVDYKEHIYHSCYVYFYCDICFVTTNTVDEFQKHASEVHDNSEGFVLLQDDNYKKRKPIEKHETDENLITTGKRKSTFYNKLVIEPEDEFGTPPPKKSNVSPSTKPTICPVCSKQYSTYANMMRHYRSHAESGFQNGEEYEQEDSLYCCPDCRGMFTAEEWESHKESHEKCTCSECGKLFQFQSELDQHRSVHLNLKLYRDSKTSTYKSQMLSPNSEQTVIVLCEVCDAIFKSKEELKEHKLIHENNVIKTEIQIKKEVLDDEEKRYQCIPCNKVYSGYSGLWEHNRKKHPEATMSTNFPKKCNECDKVLNTGGSWYMHKQMHERIAQTIAGNSPVPQPKPTRAKRSNVDGDEDDNGNDEDESYFTCKRCFKVFSTKYNLKNHMKCHGINLASTTKANTKSKSHKKVWCDVCHVSCDSNEALKKHKEEEHSQQLSNDEPEVDPMFELKNPFIFTCDVCTRTFTTKIALKKHKERHTQEEEMPVVKKPVYVYCKYCKIPFATVDLLNNHMVSEHNEESAKQKAQQQQQPQKLKQFACNVCKKAFISAAALYAHQGWHKRGKVEKQIKTQEKLFRKMVTNLAKPQTQTVQFQCSTCLVQLPNDTALQIHILEKHRNVNTVILPPKCQPCNQDFTSQEEYEHHKRLHEVVEKQQKFNKGFPCKFCPAAFSRSDTLNTHVRTIHKEHVQDDYRCNHCDRTFDKQMSLSIHLKVHEKQKGSVTSSKPLFSCSICNMGFDLPKDLRAHTIKAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -