Telo065980.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023268.1:17839837-17844522[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0008 0.15 14.9 2.7 1 23 111 134 111 134 0.97 2 28 0.026 4.8 10.2 0.8 1 23 140 163 140 163 0.95 3 28 0.23 42 7.2 1.1 1 23 170 193 170 193 0.95 4 28 0.018 3.3 10.7 2.2 2 23 309 331 308 331 0.95 5 28 0.0071 1.3 11.9 0.7 1 23 337 360 337 360 0.96 6 28 0.66 1.2e+02 5.8 1.5 1 23 366 389 366 389 0.95 7 28 0.00044 0.08 15.7 3.3 1 23 509 532 509 532 0.97 8 28 0.0061 1.1 12.2 0.7 1 23 538 561 538 561 0.95 9 28 0.65 1.2e+02 5.8 1.4 1 23 568 591 568 591 0.96 10 28 0.02 3.8 10.5 1.8 2 23 704 726 703 726 0.95 11 28 0.00025 0.047 16.5 1.4 1 23 732 755 732 755 0.93 12 28 0.25 47 7.1 1.5 1 23 761 784 761 784 0.92 13 28 1.4 2.6e+02 4.7 4.6 1 23 885 908 885 908 0.96 14 28 0.017 3.1 10.7 0.9 1 23 914 937 914 937 0.95 15 28 0.14 27 7.8 0.9 1 23 944 967 944 967 0.96 16 28 0.00027 0.049 16.4 0.5 2 23 1083 1105 1082 1105 0.96 17 28 0.00024 0.044 16.6 0.9 1 23 1111 1134 1111 1134 0.96 18 28 0.66 1.2e+02 5.8 1.5 1 23 1140 1163 1140 1163 0.95 19 28 0.0014 0.26 14.1 3.4 2 23 1275 1297 1274 1297 0.96 20 28 0.0081 1.5 11.8 0.6 1 23 1303 1326 1303 1326 0.95 21 28 0.71 1.3e+02 5.6 2.6 1 23 1332 1355 1332 1355 0.95 22 28 4.5 8.3e+02 3.1 0.5 1 23 1359 1382 1359 1382 0.92 23 28 0.048 8.9 9.3 2.8 1 23 1388 1411 1388 1411 0.96 24 28 0.88 1.6e+02 5.4 8.0 1 23 1417 1439 1417 1440 0.94 25 28 0.085 16 8.5 0.2 1 23 1446 1469 1446 1469 0.92 26 28 0.0003 0.056 16.3 3.2 1 23 1475 1498 1475 1499 0.97 27 28 0.00068 0.13 15.1 2.4 1 23 1504 1527 1504 1527 0.97 28 28 0.0016 0.3 14.0 0.8 2 23 1534 1556 1533 1556 0.91
Sequence Information
- Coding Sequence
- ATGCAGTGCGAAAATGAAGTTTGTGAGAACAGTGCTTTTAATAATATTAGCAGCGATACAGTGGTTGAAAGTCAAATAGATCATGAAAAACGTGAATTTTCTATTATAAAACTTAGAACAATGGTAGATGGTTTCGGCCCTCTTCAGTTGGTTGAAGATGATATTGAAATTTTTGAGCATGAAGTAAAAACTGATATTGACGCAAGTTTCAACATAAACGCTGGAGGTAATGGTGGAACAATACTAAAAAGTGGACTGACTGATACCTCATCTAACACAGTAAAGTTTGTATCACAAGGCAGTTCAAAAAAAGATTGTAAACGAAGTTTGTTTATATGTAATTTTTGTGGTCATAATGCTTCTAGAAAGGACCACCTCCAGTTACATATAAGGTCCGTTCATCTAAAGGAAAGACCATTTATATGTGAAATTTGTGGATTTAGAGCctcccaaaaaaattatttatcacaACACAAACTTTCAAAGCACTCATATAAAAATAAACCATTTAGATGCGACTTATGTGATTACGAAACTATTCTTAAAAGCAAATTAGACAAGCATAAAATTTCAAAGCATAAAAAACTCAAATTTAATAGTTGCAAAGTGCTGTTTAAAAATCAAGTAGCTCAGGAAAAAAGTGATGTGGATAATATACAAAGGAAAATATTGGTTGAAAATCAAGTTGACCATGAAAAAAGTGAACTCTCTGATACAAAAACTGAATTAGTGGTTGGGTGTTTTGGCTCTCAACAGTTGCTTGAACATATTACTGATATTTCCAACCATGaagtaaaaactgaaactgatggTATAGAAGCAGAATGTAATAGTGGAATGGTGCTAAAAAGTGAATCAAATCATAGCTTATATAACGCAAAAAAGTCTGTAGCACTAACAAACCATAGCAATCTTCACCTGTTAATATGCAACTTTTGTGATTATAATACTACTAGAAATTGTTACCTCCAGTTACATATAAAATCAGTCCATCTTAAGGAAAAACCATTCCAGTGTGACATTTGTGAATATAAAGcctcacaaaaaaataatttattagtacACAAACTTTCAAAGCACTCAAAAGTGAAACCATTTAGATGTGATTCATGTGACTACCAAACTATTCTTAAAAGCAGGTTAGAAAAGCACAAAATATCGAAACATAAAATACTCTTTAATTATAATAGTGGGAGAGTGCAGTTTGAAGATCAAGTAGCTCATGAAAACAGTGCTGTTGATAATATTATCAGCGATACAGTGGTTGAAAGTCAAGTAAACCACAAAACCAGTGCACAAGTTAATATAAAAAGTGAATCAATGGTCGGGAGATTTGACTCTCGTCTGTTTAAAGATGTAATTGAAATTTTTAAACATGAAGTAAAAATTGATACTGATCAAAGTTTTAGCATTAAAGCTGGATTTAATGATGGAACAGTACTACAAAGTAAATTGACTGATACCTTATGTAACACAGTAAAGTCTACATCACAGGCCAGTTCGAAAAAGCatagtaaacaaaattttatatgtaACTTTTGTGGTCACAATACTTCTAGAAAGGGTCACCTCCAGTTACACATAAGGTCAGTACATCTTAATGAAAGACCATTTATATGTGAAATTTGTGGATTTAGAGCCtcccaaaaaaataatttatcacAACACAAACTTTCAAAGCACTCACATAAAAATAAACCATTTAGATGTGATTCATGTGATTACCAAACTATTCTTAAAAGCAAATTAGACAAGCATACAATTTCAAAGCATAAAAAACTGACACTTATTAGTTCAAAAGTGCTGTTTGAAAATCAAGTAGGTCAAGAAAAAAGTGATGTGGATAATATAAAAAGGAAAATATTGATTGAAAATCCAGTAAGCCATGAAAAAGGTAAACTCTCTAATATCAAAACTGAATTAGTGGTTGAGAGTTTTGGCTCTCAACAGTTGCTTGAAGATGTTACTGACATTTCCAACCACGAAGTAAAAAATGAAACTGATGGTATAGAAGCAGAATGTAGTAGTGGAATGGTGCTAGAAAGTGAATCAAATCATATCACAGAAAGGTCTGTATCACCAACAAACCAAAGCAATCTTCGTCTATTGATATGTGACTTTTGTGATTATAATACTACTAGAAATTGTTACCTCCAGTTACACATAAAATCAGTCCATCTCAAGGAAAAACCATTCATATGTGAAAATTGTGGATATAAAACGTCCCAAAAAAGCAACTTACTACGTCACAAACTTTTAAAGCATTCTAAAGATAAaccatttaaatgttttttatgtgACTACCAAACTATTTTTAAAGGCTACTTAGAGAAGCACAAAATAGcaaaacataaaaaacttttaaattataatagTTGTAGAGTGCAAGATCAAACAGCTCATGAAAAAAGTGACCTGGATAATATAATACGGGATACAGTGGTTAAAAGTCAAGTAGACCACAAAACAACAAACAAAGATGTTACTGAAATATTTGAGCATGAAGGGAAAGTTGACACTGACCCAAGTTTCAGCATTAAAGCACGATGTAATGATGGAACAACACTAAAAACTAAACAGCCTGATACCTTACGTAACACAGTAAAGTCTGTATCAAAACGCAGTTCAAAGAAGCAtagtataaaaagtttatttatatgTGAGTTTTGTGATCACAAGAGTCATGCGAAGAGCCACCTTCAGTTACACATAAGTTCAGTCCACCTTAAGGAAAGACCATTTATATGTGAAATTTGTGGATTTAGAGCctccaaaaaaaataatttatcacAACACAAACTTTCAAAGCACTCCCATAAAAATAAACCATTTAGATGTGACTTATGTGATTACGAAACTATTCTTAAAAGCAAATTAGACAAGCATACAATTTCAAAGCATAAAAAACTAAAATCCAATAGTTGCAAAGTGCAGTTTAAAAATCAAGTAACTCCTGGAAAAAGTGATGTGGATAATATAAAAAGGAAAATATTGGTTGAAAATCAAGTAAACCATGAAAACACAAAACTCTCTAATATAGAAACTGAGTTAGTGGTAGGGAGTTTTGTCTCTCAACAGTTGCTTGAAGATATTACTGAGATTTCCAACCATGaagtaaaaactgaaactgatggTATAGAAGCAAAATCTAGCAGTAGAATGGTGCTAGAAAGTGAATCAAATCATACTCTAATTAACACAGAAAAGTCTGGATCACTGGCAAAGCAGAGCAATCTCGTTCTGTTGATATGTGACTTTTGTGATTATAATACTACTAGAAATTCTTACCTTCAGTCACATATAAGGTCAGTTCATCTTAAGGAAAAACCATTCCAGTGCGAAATTTGTGGATACAAAGCCtcacaaaaatataatttaatacaACACAAACTTTCAAAGCACTCTAAAGTTAAACCATTTAGATGTGATTCATGTGACTATCAAACTATTCTCAAAAGCAGGTTGGAAAAGcacaaaatatcaaaacataaaaTACTCTTTAATTATAATAGTTGTAGAGCAAATCAAGTAGCCCATGGAAAAAGTTATGTGGATAATGTGGTTGAAAGTCAAGCAGGTGATGAAACAAGTGAACATGCTAATATAAAAAGTGAATCACTGGGTGTAAAGTTTGGCTCTCATCAGTTTTTTGAAGAtgacattgaaatttttgagCATAAAGTAAAAAGTGATACTGATTCAAATTTCGAAATAAAAGTAGAACCTTACAATGAGACAGTGTTACAAAGTACAATAACTAGTAAGAAAGGAAAGTCTGTATCACAACGCACTTCAAGAAAGCGCGGTAAACGAAGTCTCTTAACATGCCATTTATGTGGTTACAATACCCCTAGAAAATGTAATCTCAGGTTACACATAAGGTCAGTCCATCTTAAAGAAAAACCATTCGCATGTGAAATTTGTGGATTTAAAGCGTCACAAAAAAACAATTTACTACAACACAAACTTTCAAAGCATTGTAAAGTGAAACCATTCAGATGTGACTTGTGTGATTATCAAACTTTTCTCAAACGCACATTAGAAAAGCATAAATTATCAAAGCATAAGAAACTTTTCAGTTGTGATCTGTGCGATTACAAAGCTGTATGTGTAAGTAACTTATCAGTACACATCGAGTCAAATCATAGCAAAGAAAATTGGtttaaatgtgaattatgtgattacacaTCTGCTACAAGGAGTCACATATCATCACACGTGAAGTATAAGCATTCAGGTAACAAACCACACAATTGCGATACATGTGAGTACAGTACTACCCAAAAAACTCGCTTAAAGCATCACATAATGTTCCACCATCAGAACGACAAACCATTTAAATGTGAGTTATGCACTTACAGAGCTGTCCGCCAAATTGATTTACAGCAACATGTGATAGCAAGGCACACTACAGAAAAACCATTTCGGTGTGAGTTGTGTAATTATGGATGTGTACGGAAATCCAGTTTGAAAGAACATATAATGACTGCGCATCATGGAGAAAAACCATTTAAGTGTGGTACCTGTGATTTTAGAACTATTCGCAAATCCTATTTACTACAGCACATGAGGAACAGACATTCTGAAAAAGAACCCCTCACATGTGAGTTATGTGACTACAGTACGACACAAAAATCTTACCTAATAAAACACAAACTATTTGGGCATGCTAATGAAATTGTTTAG
- Protein Sequence
- MQCENEVCENSAFNNISSDTVVESQIDHEKREFSIIKLRTMVDGFGPLQLVEDDIEIFEHEVKTDIDASFNINAGGNGGTILKSGLTDTSSNTVKFVSQGSSKKDCKRSLFICNFCGHNASRKDHLQLHIRSVHLKERPFICEICGFRASQKNYLSQHKLSKHSYKNKPFRCDLCDYETILKSKLDKHKISKHKKLKFNSCKVLFKNQVAQEKSDVDNIQRKILVENQVDHEKSELSDTKTELVVGCFGSQQLLEHITDISNHEVKTETDGIEAECNSGMVLKSESNHSLYNAKKSVALTNHSNLHLLICNFCDYNTTRNCYLQLHIKSVHLKEKPFQCDICEYKASQKNNLLVHKLSKHSKVKPFRCDSCDYQTILKSRLEKHKISKHKILFNYNSGRVQFEDQVAHENSAVDNIISDTVVESQVNHKTSAQVNIKSESMVGRFDSRLFKDVIEIFKHEVKIDTDQSFSIKAGFNDGTVLQSKLTDTLCNTVKSTSQASSKKHSKQNFICNFCGHNTSRKGHLQLHIRSVHLNERPFICEICGFRASQKNNLSQHKLSKHSHKNKPFRCDSCDYQTILKSKLDKHTISKHKKLTLISSKVLFENQVGQEKSDVDNIKRKILIENPVSHEKGKLSNIKTELVVESFGSQQLLEDVTDISNHEVKNETDGIEAECSSGMVLESESNHITERSVSPTNQSNLRLLICDFCDYNTTRNCYLQLHIKSVHLKEKPFICENCGYKTSQKSNLLRHKLLKHSKDKPFKCFLCDYQTIFKGYLEKHKIAKHKKLLNYNSCRVQDQTAHEKSDLDNIIRDTVVKSQVDHKTTNKDVTEIFEHEGKVDTDPSFSIKARCNDGTTLKTKQPDTLRNTVKSVSKRSSKKHSIKSLFICEFCDHKSHAKSHLQLHISSVHLKERPFICEICGFRASKKNNLSQHKLSKHSHKNKPFRCDLCDYETILKSKLDKHTISKHKKLKSNSCKVQFKNQVTPGKSDVDNIKRKILVENQVNHENTKLSNIETELVVGSFVSQQLLEDITEISNHEVKTETDGIEAKSSSRMVLESESNHTLINTEKSGSLAKQSNLVLLICDFCDYNTTRNSYLQSHIRSVHLKEKPFQCEICGYKASQKYNLIQHKLSKHSKVKPFRCDSCDYQTILKSRLEKHKISKHKILFNYNSCRANQVAHGKSYVDNVVESQAGDETSEHANIKSESLGVKFGSHQFFEDDIEIFEHKVKSDTDSNFEIKVEPYNETVLQSTITSKKGKSVSQRTSRKRGKRSLLTCHLCGYNTPRKCNLRLHIRSVHLKEKPFACEICGFKASQKNNLLQHKLSKHCKVKPFRCDLCDYQTFLKRTLEKHKLSKHKKLFSCDLCDYKAVCVSNLSVHIESNHSKENWFKCELCDYTSATRSHISSHVKYKHSGNKPHNCDTCEYSTTQKTRLKHHIMFHHQNDKPFKCELCTYRAVRQIDLQQHVIARHTTEKPFRCELCNYGCVRKSSLKEHIMTAHHGEKPFKCGTCDFRTIRKSYLLQHMRNRHSEKEPLTCELCDYSTTQKSYLIKHKLFGHANEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -