Telo000527.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:7032230-7034215[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.014 2.7 11.0 4.0 1 23 250 273 250 273 0.97 2 14 0.00041 0.076 15.8 1.2 1 23 283 306 283 306 0.94 3 14 5.6e-05 0.01 18.6 0.9 1 23 312 335 312 335 0.94 4 14 4.2e-05 0.0077 18.9 0.4 1 23 341 364 341 364 0.94 5 14 5.3e-05 0.0097 18.6 1.3 1 23 370 393 370 393 0.98 6 14 0.00013 0.024 17.4 0.9 1 23 399 422 399 422 0.92 7 14 0.00037 0.068 16.0 2.6 1 23 428 451 428 451 0.94 8 14 1.4e-05 0.0025 20.5 1.7 1 23 457 480 457 480 0.98 9 14 0.00016 0.03 17.1 1.6 1 23 486 509 486 509 0.94 10 14 0.0085 1.6 11.7 0.1 5 23 516 535 514 535 0.91 11 14 4.1e-05 0.0075 19.0 1.7 1 23 541 565 541 565 0.92 12 14 1.1 2e+02 5.1 0.1 2 23 575 597 574 597 0.91 13 14 0.046 8.5 9.4 1.8 1 23 603 626 603 626 0.97 14 14 0.02 3.6 10.5 1.5 1 19 638 656 638 659 0.95
Sequence Information
- Coding Sequence
- ATGACCCATGTTTATAAGGAAGAATTGGAGAACTTTCTGAAAATTGAAGGTGATCCACGTTCTGACAGAGAATTAAAAAGTGATAATAAAATTATCTGTGATAATGAGTCCCTTCATAATGGCTTGCTATTCCATGATTATGCCAAAGTTGTGAAACATCCTGTGAAAATTGAAGCTACTGAAAATTTTGATGTGAAAGTAGAAAGTATTTGTGAAACCTCTGTGAAAAGTGAATTTGCTCACAATGCTCTGCTGTCTCATGATTATACCAAACTTGTAGAACTTTCACTGGAACCTGAAGCTGGCCAAACTTTTCATACAAAAATAGAAAGTGATGGTCAAACTTTGTTGACAAATGAATTAACTAGCAATGCTTTGCAGTTCCATGATAATATTACAATTGTGGAACAAAACGCAGAATACAAGCCAAACATAACCGACCTGCCTAATACTGTTAAACAGGAGAAGATCGAAGTACAGTTTTTACATGAACCAATACATGATTTTATAGGTGAGGTGAATATTGATGAAATAAGTCCCAATATAACTGAGCACTTTCAAACTGTTACAGGTGGAGAGGTAATTaatgaaacaaatgaaaatgtttttattaaaagtgaaatatGTATAGAAGATTTTAAAATGGAAACATTTGACCATGGCTGCACGGGTCTTGCTAATCATGACTCTCTCGATCCAAATGATGTATTCGTGAAAAATGAAGTAAGTCACAGTGAAGTAAAGCCTTATAAATGTAGTAAATGCGACTTTAATACTGCTCATCAGAAATATTTATCAACACATGTAAAGGTGAAACATACTAATAAACCACTATATATATTACCTTATAAATGTGGcaaatgtgattatagtactatTCAAAAGTttcagttaacacaacacataacagcaagacacCCTGAAGAAAAGCCATATAAATGTGGTAAATGTGACTATAGTACTATTCAAAAGTctcagttaacacaacacataacagcaagacacCCTGAAGAAACGCCTTATAAATGTGGCaaatgtgattatagtagtgtTCAAAAGTCTTGGTTAACACGACACATAATAGCAAAACACCCTGAAGAAAAGCCTTATAAATGCGGtaaatgtgattatagtactatTCAAAAGTATCAGTTAATACAACACATAACAACAAGACACCCTGAAGATACGCCTTATAAATGTGGtaaatgtgattatagtactgttcaAAAGTCTCAGTTAACACAACACGTAACAGCAAGACACCCTGAAGAAATGCCTTATAAATGTGGTAAATGTGATTATAATACTGTTCGAAAGTCTTGTTTAACACGACACATAATAGCAAAACACCCTGAAGAAAAGCCTTATAAATGTGGtaaatgtgattatagtactaaTCGAAAGTCTCAGTTAATACAACACATAACAACAAGACACCCTGAAGAAACGCCTTATAAATGTGGTAAATGTGATTGTAGTACTGTTCAACAGTctcagttaacacaacacataatagCAAAACACCCTGAAGAAAAGCCTTATAAATGTGGTTATAGTAGTGTTCGACAGTctcagttaacacaacacataatagcaaaacaccctgaagaaaagccttataaatgtggtaaatgtgattatagtactgttcgACAGTctcagttaacacaacacataacaaCAAGAAAACACAACAAAAACAATAAAGAAGGACCtgttaaatgtgatcagtgtgattttacTGGTGTTGGAAGGTTACAGTTGGAACAACATATAGCAGCAACTCACAGTGAAGTAAAGCCTTATAAATGTGGTAAATGTGACTTTAATACTGCTTATCTGAAATATTTATCAAAACATGAAAAGGTGAAACATACTAATAAACAAAAACCGTTATGCATATTACCTTATAAATGTGGCAAATGTGATTATAGGACAATTAAAAAGCGTCAACTAACAACACATAATAGCAAGACATCCTGA
- Protein Sequence
- MTHVYKEELENFLKIEGDPRSDRELKSDNKIICDNESLHNGLLFHDYAKVVKHPVKIEATENFDVKVESICETSVKSEFAHNALLSHDYTKLVELSLEPEAGQTFHTKIESDGQTLLTNELTSNALQFHDNITIVEQNAEYKPNITDLPNTVKQEKIEVQFLHEPIHDFIGEVNIDEISPNITEHFQTVTGGEVINETNENVFIKSEICIEDFKMETFDHGCTGLANHDSLDPNDVFVKNEVSHSEVKPYKCSKCDFNTAHQKYLSTHVKVKHTNKPLYILPYKCGKCDYSTIQKFQLTQHITARHPEEKPYKCGKCDYSTIQKSQLTQHITARHPEETPYKCGKCDYSSVQKSWLTRHIIAKHPEEKPYKCGKCDYSTIQKYQLIQHITTRHPEDTPYKCGKCDYSTVQKSQLTQHVTARHPEEMPYKCGKCDYNTVRKSCLTRHIIAKHPEEKPYKCGKCDYSTNRKSQLIQHITTRHPEETPYKCGKCDCSTVQQSQLTQHIIAKHPEEKPYKCGYSSVRQSQLTQHIIAKHPEEKPYKCGKCDYSTVRQSQLTQHITTRKHNKNNKEGPVKCDQCDFTGVGRLQLEQHIAATHSEVKPYKCGKCDFNTAYLKYLSKHEKVKHTNKQKPLCILPYKCGKCDYRTIKKRQLTTHNSKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -