Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023268.1:139073366-139078258[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00029 0.054 16.3 0.4 1 23 117 139 117 139 0.92

2 16 0.018 3.2 10.7 1.0 2 23 145 166 145 166 0.97

3 16 0.0046 0.85 12.5 7.5 1 23 172 194 172 194 0.99

4 16 0.00028 0.051 16.4 1.4 1 23 200 222 200 222 0.95

5 16 0.017 3.2 10.7 4.8 1 23 228 250 228 250 0.98

6 16 0.0097 1.8 11.5 3.2 1 23 256 278 256 278 0.97

7 16 0.0033 0.6 13.0 2.0 1 23 283 306 283 306 0.97

8 16 4.9e-05 0.0091 18.7 2.2 2 23 310 331 310 331 0.97

9 16 4.1e-05 0.0076 19.0 1.3 2 23 338 360 337 360 0.96

10 16 0.00021 0.039 16.7 6.0 1 23 367 389 367 389 0.98

11 16 1.5e-05 0.0028 20.4 0.8 1 23 393 415 393 415 0.93

12 16 4.6e-05 0.0085 18.8 2.4 1 23 421 443 421 443 0.99

13 16 0.0011 0.21 14.4 1.1 1 19 449 467 449 469 0.94

14 16 0.01 1.9 11.5 3.2 1 23 477 499 477 499 0.98

15 16 0.008 1.5 11.8 3.8 1 20 505 524 505 526 0.94

16 16 0.0056 1 12.3 3.0 1 23 539 562 539 562 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00029	0.054	16.3	0.4	1	23	117	139	117	139	0.92
2	16	0.018	3.2	10.7	1.0	2	23	145	166	145	166	0.97
3	16	0.0046	0.85	12.5	7.5	1	23	172	194	172	194	0.99
4	16	0.00028	0.051	16.4	1.4	1	23	200	222	200	222	0.95
5	16	0.017	3.2	10.7	4.8	1	23	228	250	228	250	0.98
6	16	0.0097	1.8	11.5	3.2	1	23	256	278	256	278	0.97
7	16	0.0033	0.6	13.0	2.0	1	23	283	306	283	306	0.97
8	16	4.9e-05	0.0091	18.7	2.2	2	23	310	331	310	331	0.97
9	16	4.1e-05	0.0076	19.0	1.3	2	23	338	360	337	360	0.96
10	16	0.00021	0.039	16.7	6.0	1	23	367	389	367	389	0.98
11	16	1.5e-05	0.0028	20.4	0.8	1	23	393	415	393	415	0.93
12	16	4.6e-05	0.0085	18.8	2.4	1	23	421	443	421	443	0.99
13	16	0.0011	0.21	14.4	1.1	1	19	449	467	449	469	0.94
14	16	0.01	1.9	11.5	3.2	1	23	477	499	477	499	0.98
15	16	0.008	1.5	11.8	3.8	1	20	505	524	505	526	0.94
16	16	0.0056	1	12.3	3.0	1	23	539	562	539	562	0.95

Sequence Information

Coding Sequence: ATGGATCCCTTTTCATTAGCAGAGTGTACTGTAGATATAAATACAGACAACACACCACTTGAAAGAAATGATGTAATCAAGATTGAAAGCTCTACATCCAATGAACAATCCGTTGATGAAGATTCAGATGTGCAATGCTTAGATAATTCTGAAGAAAGTGAAGATATACAGTCTTCAAATTTACCACTGCACCTACCTACAGAAGTGTATGTAAAATATGAAGACGATGGTACATTATTTAACGAATCTATGGAAAACAACGAAGCTAACCGTTTAGCTTTAGAACAGGAGTACGATAAACTGAACCCCTTTGATTATCCGAACTCTTGTAGAGGTTTAGACAGTACCTACACTTGTGATATTTGCCAGGAAGAATTTAGAACTTATCCTGATTTAAGGAAACACAAGGGGGCTCATTATATTTCTAAAAGAACATGCAATATTTGCAGTTTAGTTTGCCAAAACGTAAGTAAGTTGGAAGAACATATAAACTCACACTTGGGACTCAAGCCATTTCAGTGCAATGAGTGTAAGAAACACTTTAGCTGTAAGCAGCAGTTGAGGATTCATACTCGTATACATAATGACGAAAGGCCTTATCAATGCAAGCGCTGCAATAAAGCTTTTAGACATTTGGGATCCTTGCGGGGCCATGAAGTGGTTCATACTGGATTGACAGACTTCAAGTGTAAGaaatgttACAAGATTTGCTTGAACGCCAAAGCTTTAAAGAAACACATGAAATTACATGATAAAGAAAGGAGTTTTTTTTGTCAATTGTGCAAGAAAGATTGCAAAAGTGATCGTAACCTCGAAATTCACCTAAAAGTACACAAAGAACTGAAATATCCCTGTGACTTCTGCCAGAAAGTTCACGATACACTATACCAATTAAAACGCCACATCAAACGAGCCCATATTCCAAATGTCTGCGAAGACTGCCATAAAGTCTACTACGACAGAGCTGAGTTCACGAAACATCGGAAGACTCACAAAGCCGAAGGACCTACACAATGTACATTGTGCGGTAAAGACTTCAAAAAAGAAAAGAATCTACGTGAGCATGTTCGATTGCAACATACGAAAGACGGCAAGCCACATGTCTGCCACATTTGCAACAAAGATTTCATGAATCATTCTCTGCTTAACAACCATGTTAAAACTCACGACAAACCGTTCATTTGCACGGAATGTAACAGAACGTTTAGTTCTAGGTATAATTTGGAGTCGCATTCAGTCGTACATACTGGCGCAAGAAAATTCCAGTGTCCGACTTGTCAGAACTTCTACACATCGAAGACTAGCCTGAAGAACCATATGGAAACGCACAACGTAATCAGAAAATATCAGTGTGATCAATGCCCGAAGCGATTCAAATCAAAACGAAGATTATATGTTCATAAAGCATGTCATATAACGGAGGAGAACTTTGAATGTTCTCAGTGTACGGCTAGATTTAAAACCAAGCAATACCTCAAGTTTCACATGATAAAGCATTCTAAGGTCAAACCGTTTGAGTGCAAAGCTTGTAATAAACGTTTTAAGCATAGAAAGTCGTGGAATAGACATGCGAACCATGATCAGAATATGAGATATGAGGAACCTGCCGAAGAATTTGAATGTTATTACTGCGAGGAATCTTTTTCGACCAAAACGATGATGTTAGAGCATGTTAAACATAAACACGAGGAAATGGGATATTTTCCAGATGCGGCTCATTTGGGTGATGAAGATGGAGCCTATTTGGATGACGAGGATGAGGTTAATGATGAAGAATCTGAAATGCAGAATGACTACTCATTACAGAATGGAGAAGATTATGTTGAGAATAATATTTATGAAAGAGGTGATATCCAGGAAGACGCTGCCGAACCAACAGTTAATGCTCTTCATATTAAGTCTGAAGTAGTCACTTAA
Protein Sequence: MDPFSLAECTVDINTDNTPLERNDVIKIESSTSNEQSVDEDSDVQCLDNSEESEDIQSSNLPLHLPTEVYVKYEDDGTLFNESMENNEANRLALEQEYDKLNPFDYPNSCRGLDSTYTCDICQEEFRTYPDLRKHKGAHYISKRTCNICSLVCQNVSKLEEHINSHLGLKPFQCNECKKHFSCKQQLRIHTRIHNDERPYQCKRCNKAFRHLGSLRGHEVVHTGLTDFKCKKCYKICLNAKALKKHMKLHDKERSFFCQLCKKDCKSDRNLEIHLKVHKELKYPCDFCQKVHDTLYQLKRHIKRAHIPNVCEDCHKVYYDRAEFTKHRKTHKAEGPTQCTLCGKDFKKEKNLREHVRLQHTKDGKPHVCHICNKDFMNHSLLNNHVKTHDKPFICTECNRTFSSRYNLESHSVVHTGARKFQCPTCQNFYTSKTSLKNHMETHNVIRKYQCDQCPKRFKSKRRLYVHKACHITEENFECSQCTARFKTKQYLKFHMIKHSKVKPFECKACNKRFKHRKSWNRHANHDQNMRYEEPAEEFECYYCEESFSTKTMMLEHVKHKHEEMGYFPDAAHLGDEDGAYLDDEDEVNDEESEMQNDYSLQNGEDYVENNIYERGDIQEDAAEPTVNALHIKSEVVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -