Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023263.1:98560207-98561292[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0001 0.018 17.8 5.4 2 23 52 73 51 73 0.97

2 10 7.9e-07 0.00015 24.4 1.2 1 23 79 101 79 101 0.98

3 10 4e-05 0.0074 19.0 1.8 1 23 107 129 107 129 0.99

4 10 0.00037 0.068 16.0 0.2 2 23 136 158 135 158 0.95

5 10 3.7e-05 0.0068 19.1 1.4 1 23 163 185 163 185 0.96

6 10 2.1e-05 0.0038 19.9 3.3 1 23 194 217 194 217 0.98

7 10 3.1e-05 0.0057 19.4 0.3 1 23 224 246 224 246 0.98

8 10 6.9e-07 0.00013 24.6 0.8 2 23 253 274 252 274 0.97

9 10 0.0005 0.092 15.6 2.9 1 23 280 302 280 302 0.98

10 10 2.9e-05 0.0053 19.5 0.2 1 23 308 330 308 330 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0001	0.018	17.8	5.4	2	23	52	73	51	73	0.97
2	10	7.9e-07	0.00015	24.4	1.2	1	23	79	101	79	101	0.98
3	10	4e-05	0.0074	19.0	1.8	1	23	107	129	107	129	0.99
4	10	0.00037	0.068	16.0	0.2	2	23	136	158	135	158	0.95
5	10	3.7e-05	0.0068	19.1	1.4	1	23	163	185	163	185	0.96
6	10	2.1e-05	0.0038	19.9	3.3	1	23	194	217	194	217	0.98
7	10	3.1e-05	0.0057	19.4	0.3	1	23	224	246	224	246	0.98
8	10	6.9e-07	0.00013	24.6	0.8	2	23	253	274	252	274	0.97
9	10	0.0005	0.092	15.6	2.9	1	23	280	302	280	302	0.98
10	10	2.9e-05	0.0053	19.5	0.2	1	23	308	330	308	330	0.98

Sequence Information

Coding Sequence: ATGGAAAGTATCAACTTCAACAATTGCATAATATGGTCACAGAAAAAGACAAGAAGAAAGCCAAAAGTTGTAACAAACCTTCAGCACATCAAAAACATCAAAGTTGAGGAATTAAACAAGGAAGACTCGGTTAAATCCGAGCATACTGTTAAATATTGTCATCAGTGTTCAAAGTCTTTTTCCAGTATGAGGAAACTTAAAAAACATATGATTTCACATAGTAATGACAGACCGTATTCCTGTGAAGTTTGCAAAAaagcatttaaaagaaaatatgaagTCAAAGTACATCAGAGAGTACACACAAATCCTTTATGTTTCCAGTGTAATTTTTGCCCAAAGGTGTTAAAATCAAAGGGATCATTTATGATTCATCGAAGAAGGCATCTTAAGCTGTATGTTGGAAAATGTGAAATGTGTGATATGGGGTTCGTGACTAATCAAGAATATCAAAACCACATGGGTTCTAAACATGGTGTCAGTTCACACATATGTGATATCTGCGGTAGATCATGTTATGATAAAGCATCGTTGCAGGGACATATGGCCAGACATGCCAAGGATTATGAAAAGAATGAGTTTAAATGTGACGAATGTGGTAAAAATTTCCTACAACAAAGGTACCTTAAACACCATATGATGAGAGTTCACACAAATGGAGGTCAGAAATTTGTGTGTGACCTTTGTggtaaaaaagttaattcaaaacGTAGTTTGAGAGACCACTTATTAGTTCATCAAGGAATTAAGCCACTAGAATGTAAAGAGTGTGGAAAAACTTTTGCAATCAGGACTACGTTGAAGTTACACATGCGCACACATACTGGTGATAGGCCGCATACTTGCTCATTTTGTTTTCGAGCTTTCACACAAAGGGGTCCCTTGAAAATCCATTTGAGGTACCACACAGGAGAACGCCCTTACATCTGTGAGATATGCAACGAATCTTTTGTTAGTAAAGGCATTCTGACTGTGCATATGAAGAAACATTCTAGCATGTTATAA
Protein Sequence: MESINFNNCIIWSQKKTRRKPKVVTNLQHIKNIKVEELNKEDSVKSEHTVKYCHQCSKSFSSMRKLKKHMISHSNDRPYSCEVCKKAFKRKYEVKVHQRVHTNPLCFQCNFCPKVLKSKGSFMIHRRRHLKLYVGKCEMCDMGFVTNQEYQNHMGSKHGVSSHICDICGRSCYDKASLQGHMARHAKDYEKNEFKCDECGKNFLQQRYLKHHMMRVHTNGGQKFVCDLCGKKVNSKRSLRDHLLVHQGIKPLECKECGKTFAIRTTLKLHMRTHTGDRPHTCSFCFRAFTQRGPLKIHLRYHTGERPYICEICNESFVSKGILTVHMKKHSSML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -