Telo000766.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:10577655-10580477[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.024 4.3 10.3 2.6 1 23 166 189 166 189 0.96 2 27 0.012 2.2 11.2 0.7 1 23 195 218 195 218 0.96 3 27 0.36 67 6.6 1.0 1 23 224 247 224 247 0.93 4 27 0.011 2.1 11.3 1.4 1 23 253 276 253 276 0.95 5 27 2.2 4e+02 4.1 0.2 1 23 282 305 282 305 0.89 6 27 0.0049 0.89 12.5 0.5 1 23 311 334 311 334 0.97 7 27 0.075 14 8.7 0.1 1 23 340 363 340 363 0.95 8 27 0.0018 0.33 13.8 1.9 1 23 369 391 369 391 0.98 9 27 0.0057 1 12.2 1.1 1 23 397 420 397 420 0.93 10 27 1.5 2.7e+02 4.7 5.1 1 23 426 449 426 449 0.95 11 27 0.0094 1.7 11.6 1.0 1 23 455 478 455 478 0.96 12 27 0.011 2.1 11.3 2.8 1 23 484 507 484 507 0.95 13 27 0.46 85 6.2 0.1 1 23 513 536 513 536 0.95 14 27 0.12 21 8.1 5.3 1 23 542 565 542 565 0.92 15 27 2.3 4.2e+02 4.0 0.4 1 16 571 586 571 594 0.84 16 27 0.0019 0.34 13.8 0.5 1 23 600 623 600 623 0.96 17 27 0.67 1.2e+02 5.7 3.5 1 23 629 652 629 652 0.88 18 27 0.0022 0.41 13.5 1.3 1 23 658 681 658 681 0.97 19 27 0.0012 0.23 14.3 1.1 1 23 687 710 687 710 0.92 20 27 5.5e-05 0.01 18.6 1.3 1 23 716 739 716 739 0.94 21 27 0.033 6.1 9.8 0.3 1 23 745 768 745 768 0.94 22 27 0.6 1.1e+02 5.9 1.9 1 23 774 797 774 797 0.97 23 27 0.0021 0.39 13.6 2.6 1 23 801 824 801 824 0.95 24 27 0.00084 0.15 14.9 2.1 1 23 830 853 830 853 0.98 25 27 9.7e-05 0.018 17.8 0.6 1 23 859 882 859 882 0.96 26 27 0.01 1.8 11.5 0.2 1 23 888 911 888 911 0.95 27 27 0.00048 0.089 15.6 0.4 1 23 917 940 917 940 0.96
Sequence Information
- Coding Sequence
- atGAGTGTGGTGAGCAAAGAGAGCCAGCTTTGTGATTGCAACTGTAAAACAGTTCACAAAACCGAGTGTGCGTATAATAGGAATGGCATTTACGTAGATGGCTTTGATACCAAAAAGGAACGTTTAGTGCTTGAATGCGAACAAAACTCTGGTCACCAATGGGGAGAAAGAGTGAAAATTGAACACAACACAGAATATAGGCATATCACTGTTAAACTGGAAAATATGGAAGTTCAGTCTTTAGATGAACCAAAACATGAGCTGAATATTGGTGAAGTGAGCCACGAGGGAACTGAGGGTTTTGAAGCTGTTACAGGTGGACAGGTAgttgatgaaaatgtttttattgaaggTGGAATGATCATAgaagattttaaaattgaaacgTTAGACCATGGCTGCACAGGTCTTAGTAATAAGGACATTGTCGATCTGAAGAATGTACTAGTGAAAAATGAAGTAGGTACAAAATCAAAACACAATGCAAGAATTTCTTACATTTGCAACACATGCGATTACAGAACTTTTTACAAACGGACTTTATCAAACCACATACAGTCAAAACATCCtagagaaaaaccttttaaatgctATCAGTGTGACTATAGTACAGCCATTAAGTATTCTTTAGCAAGTCATATAATGTTAAAACATACTGAAAGAAGACCGTTTAAATGTGTTCAGTGTGATTTTTGTACTGTTAGGAAGTGGattttaacacaacacataattgCAAGTCACAGTAAAGAAatgccttataaatgtgataaatgtgactttagtactTCAGTTAAACATTCCTTGGGACTTCATATAATGGCAAAACATACTGGAGAAAGACCATTTAAATGCGGTCAATGTGGTTATGGTGCCGTTAAAAAGTATATCATAACAAACCACATACGGGCAAGACACGCTGAAGAAATGCCTTATAATTGTGATAAATGTGGCTTCAGTACTGCATATAAGCGATCTTTAGCAGGTCATATAATGTCAAAACATACTGGCAAAAACCCAtttaaatgtggtcagtgtgattatagtgctATTACTAAGTCTGTGATAACACAACACATCATGGCAATGCACAGTGAAGAAAAGCCCTATAAATGTGGCaaatgtgactttagtactgcACAGAAGTGTTCGTTAGCACTTCATATGGCAAAACATACTGAagaaagaccatttaaatgtggtcaatgtgattatagtgtCGTTAAAAAGTTTAAGTTAACACGGCATGTACTGGCAAAGCACACTGAAGAGAAGCCTTATAATTGTTATAAATGTGACTTTGGTACTACACTCAAGCATTGTTTATCAAGACATATAATGGCAAAACATACTAAagaaagaccatttaaatgttatcagtgtgattatagtactgttagaAAGACTGACTTACCACAACACATACGGGCAAAGCACACTGATGAAAGACCCCATAAATGTGATATATGTGACTTCAGTACTGCACATAGGCAGTCTTTAAGAGGTCATATAAAggcaaaacatacaggagaaagaCCATTTGAATGTGGTCAATGTTCTTTTGCTGGCATTCTAAAGTATGAGTTAGTGAGACATATACAGGCAAAACACACCAAAGAAAAGCGTTTTAAATGTGATAAATGTGATTTTTGTACTTTTAGCAAGTTGCATTTAACAAAACATGTAATTGCAAGTCACAGCGAAGaaaagccttataaatgtgacAAATGTGACTTTAGTACTATAGTTAAGCGATCTTTGCCATTTCATATAATGGCAAAACATACTGAAAACAGACCGTTTAAATGTAGTGAGTGTGATTATGGTGCCGTTCAAAAGTttcagttaacacaacacatacaGGCAAAACATAGTGAAGAAAGGCAATATAAATGTGATGAATGCCACTTTAGTACTATACGTAAGCGATCTTTAGCATGTCATGTAATGGCTAAACATACTGAAAAcagaccatttaaatgtggtcAATGTGATTACATTTGTGTTAGCCAGGGTcggttaacacaacacataagagcaagacacactgaagaaaggccttataaatgtggtcagtgtgattatgTGTGTGTTAGGAAGGCTCAGTTAACACTACATGTAACGGCAAGACACACTGAAATAAGGCCTTATAAATGTCGTCAGTGTGGTTATAGTACTGTCAGAAAGTCacagttaacacaacacataacagcAAGGCACACTAACATAAAaccttataaatgtggtcagtgtgattatatGTGTATTGAAGAGTCTATGTTAGCAGAACACATAACAGCAAGGCACACCAAActaaggccttataaatgtgagcAATGTGAGTTTAGTACTGCATTTAAGAAATATTTGTCACCACACGTAAGGAGGAAACATCTGAAGCtgtttaaatgtgatcagtgtgattgtAGTACTGCTAACAAGTTCCAATTAGCACGACACATAACAttaagacacagtgaagaaagaccatataaatgtggtcagtgtgattttAGTACTGTTAAAAGGTATGGCTTAAAACAGCACATGCAGAGAAAACACTCTGTAGAAAGGCCTTATGAATGCAATAAATGTAATTTTAGTACTGTCCGTAAGGATTCTTTAGCACGTCACATAATGGCAAAACATACTCAAGAAagaccatataaatgtgatcagtgtgattatagtggTGTTATCAAGTCCCAATTAATACAACATGTAACAGTaaaacacagtgaagaaagacaatataaatgtggtcagtgtgattatagtagtgtTGGAAAGTCccagttaacacaacacatacaGGCAAAACACTGA
- Protein Sequence
- MSVVSKESQLCDCNCKTVHKTECAYNRNGIYVDGFDTKKERLVLECEQNSGHQWGERVKIEHNTEYRHITVKLENMEVQSLDEPKHELNIGEVSHEGTEGFEAVTGGQVVDENVFIEGGMIIEDFKIETLDHGCTGLSNKDIVDLKNVLVKNEVGTKSKHNARISYICNTCDYRTFYKRTLSNHIQSKHPREKPFKCYQCDYSTAIKYSLASHIMLKHTERRPFKCVQCDFCTVRKWILTQHIIASHSKEMPYKCDKCDFSTSVKHSLGLHIMAKHTGERPFKCGQCGYGAVKKYIITNHIRARHAEEMPYNCDKCGFSTAYKRSLAGHIMSKHTGKNPFKCGQCDYSAITKSVITQHIMAMHSEEKPYKCGKCDFSTAQKCSLALHMAKHTEERPFKCGQCDYSVVKKFKLTRHVLAKHTEEKPYNCYKCDFGTTLKHCLSRHIMAKHTKERPFKCYQCDYSTVRKTDLPQHIRAKHTDERPHKCDICDFSTAHRQSLRGHIKAKHTGERPFECGQCSFAGILKYELVRHIQAKHTKEKRFKCDKCDFCTFSKLHLTKHVIASHSEEKPYKCDKCDFSTIVKRSLPFHIMAKHTENRPFKCSECDYGAVQKFQLTQHIQAKHSEERQYKCDECHFSTIRKRSLACHVMAKHTENRPFKCGQCDYICVSQGRLTQHIRARHTEERPYKCGQCDYVCVRKAQLTLHVTARHTEIRPYKCRQCGYSTVRKSQLTQHITARHTNIKPYKCGQCDYMCIEESMLAEHITARHTKLRPYKCEQCEFSTAFKKYLSPHVRRKHLKLFKCDQCDCSTANKFQLARHITLRHSEERPYKCGQCDFSTVKRYGLKQHMQRKHSVERPYECNKCNFSTVRKDSLARHIMAKHTQERPYKCDQCDYSGVIKSQLIQHVTVKHSEERQYKCGQCDYSSVGKSQLTQHIQAKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -