Telo057370.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023267.1:4528235-4530082[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0023 0.42 13.5 0.2 2 23 211 233 210 233 0.95 2 14 7.2e-05 0.013 18.2 4.3 1 23 239 262 239 262 0.98 3 14 7.9e-05 0.014 18.1 0.7 1 23 268 291 268 291 0.97 4 14 0.0001 0.019 17.7 0.9 1 23 297 320 297 320 0.98 5 14 1.8e-05 0.0032 20.1 3.8 1 23 326 349 326 349 0.98 6 14 9.4e-05 0.017 17.9 0.2 1 23 355 378 355 378 0.96 7 14 0.0012 0.23 14.3 1.2 2 23 385 407 384 407 0.95 8 14 1e-05 0.0019 20.8 1.2 1 23 413 436 413 436 0.96 9 14 0.0033 0.61 13.0 0.2 2 23 443 465 442 465 0.95 10 14 0.00028 0.052 16.3 1.0 1 23 471 494 471 494 0.96 11 14 9e-05 0.017 17.9 0.9 1 23 500 523 500 523 0.96 12 14 0.036 6.6 9.7 0.2 2 23 530 552 529 552 0.95 13 14 0.0058 1.1 12.2 2.0 1 23 558 581 558 581 0.91 14 14 0.0017 0.3 13.9 4.5 1 23 587 610 587 610 0.94
Sequence Information
- Coding Sequence
- ATGAATGTGAACAAAGAGAGCCAGCTTTGTGATTGCAACTGTAAAACAGTTCACAAAAGTGACTGCAAGTATAGTGATGATGACATTTTCGTAGATGGCTTTGATACTAAAGAGCTAGATTTAGTTCTTAAACAGCGACAAAACTCTGTGCATCAAGGGAAAGTGGAAATTGAACACGACACAGAATATATGCCTTTTACTACTAAAGTGGAGAAGATCGAAGGACAGTGTTTAGACGAACCAGAACCTGACTTTGTAGGTGGAGTGAGCCATCAAAGAACTGGGGATTTCGAAGCTGTTACAGGTGTAGAGATAATTGATGTAGaaaatacaaatgtttttattaaaaatgaaatgattatagaagaatttaaatttgaaacattagaCTATGGCTGCACAGGTTTCAGTAATCATGACTTTGTCGATTTGAAGGATGTATTAGTGAAAAATGAAGGAGGTACAAATTTAAAAGATAATGCAAACTGTTCTTACAATTGTAACACAGACAATTACAAAACTGCCTGGGAAATGGACGTACCACAACACATACAGCCAAAACCCACTTCAGAAAAGCCTTCTAAATGTTATCCTATATATGGGACAGAACATTCTAAAAAAACTCAgattaaatgtgatcagtgtgattattctGCTGTTACAATGGCTCAGCTAACAcgacacataaaagcaaaacacactgaagaaaggcgttttaaatgtgatcagtgtgattattgtacagttAGAAAATATAACTTAACACTACACATAAaatcaagacacagtgaagaaagaccttataaatgtgatcagtgtgattattctACTGTTACAATGGCTCAGTTAACACGACACATAAAAGAAAGACACGTTAGAGAAAGgtgttttaaatgtgatcagtgtgattattctACTGTTGCAAATTATCAGTTAACAAGACACATAAAAGTgagacacactgaagaaaggccttataaatgtgatcagtgtgattattgtacagttAGAAAATCTAACTTAACACTACACATAAAATCAAGGCACAGTGATGAAAGACCTTATATGTGTAATCAGTGTGGTTATTCTGCTGTTACAAAGGCTCTGTTAACACGACACATTAAAGCAAGACACATTGGAGAAAGGTGTTtaaaatgtgatcagtgtgattattgtgctgTTACAAAGTCTTACTTAATATCACACATAAAAGCAAGgcacagtgaagaaaggccttttaaatgtgatcagtgtgattatagtaccgctagaaagtctcagttaactcaacacataaaagcaagacacattGCAGAAAGGCCtgttaaatgtgatcagtgtgattattctACTGTTGCAAAGGctcagttaacacaacacataaaagcGAGACACAGTAaagaaaagccttttaaatgtgatcagtgtgattattttGCAGTTAGAAGGTCTCAGTTAActcaacacataaaagcaagacacagtggagaaaggccttttaaatgtgatcagtgtgattatagtacagTTAGAAGATATGACTTAACACTACATATAAAGGCAAGACACAGTGGAGAAAGGTGtgttaaatgtgatcagtgtgattattatGCTGTTGCAAAGTCTCAATTAActcaacacataaaagcaagacacaatGGAGAACGGCGTTTTAAATgtggtcaatgtgattatagGGCTGTTACAAAGTCTCACCTAACAGAACACAAAACAGCAAGACACACaaaagaaagaccttataaatgtgatcagtgtcaTTATTGTGCAGTTAGAAAGTCTCAGTTAACTCAACACATAACAGCAAAACACGGTGAAGAAAGGCTTTAA
- Protein Sequence
- MNVNKESQLCDCNCKTVHKSDCKYSDDDIFVDGFDTKELDLVLKQRQNSVHQGKVEIEHDTEYMPFTTKVEKIEGQCLDEPEPDFVGGVSHQRTGDFEAVTGVEIIDVENTNVFIKNEMIIEEFKFETLDYGCTGFSNHDFVDLKDVLVKNEGGTNLKDNANCSYNCNTDNYKTAWEMDVPQHIQPKPTSEKPSKCYPIYGTEHSKKTQIKCDQCDYSAVTMAQLTRHIKAKHTEERRFKCDQCDYCTVRKYNLTLHIKSRHSEERPYKCDQCDYSTVTMAQLTRHIKERHVRERCFKCDQCDYSTVANYQLTRHIKVRHTEERPYKCDQCDYCTVRKSNLTLHIKSRHSDERPYMCNQCGYSAVTKALLTRHIKARHIGERCLKCDQCDYCAVTKSYLISHIKARHSEERPFKCDQCDYSTARKSQLTQHIKARHIAERPVKCDQCDYSTVAKAQLTQHIKARHSKEKPFKCDQCDYFAVRRSQLTQHIKARHSGERPFKCDQCDYSTVRRYDLTLHIKARHSGERCVKCDQCDYYAVAKSQLTQHIKARHNGERRFKCGQCDYRAVTKSHLTEHKTARHTKERPYKCDQCHYCAVRKSQLTQHITAKHGEERL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -