Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023267.1:34196809-34220361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 4.5 10.2 0.1 2 23 149 170 148 170 0.94

2 12 0.0011 0.2 14.5 1.5 2 23 177 198 177 198 0.97

3 12 6.7e-07 0.00012 24.6 0.8 1 23 204 226 204 226 0.96

4 12 0.00021 0.038 16.8 0.7 3 23 234 254 232 254 0.96

5 12 3.3e-06 0.0006 22.4 0.8 2 23 261 282 260 282 0.97

6 12 0.00017 0.031 17.1 7.8 1 23 288 310 288 310 0.97

7 12 1.5e-06 0.00028 23.5 3.8 1 23 316 338 316 338 0.98

8 12 2.9e-06 0.00054 22.6 0.8 1 23 344 366 344 366 0.98

9 12 3.2e-06 0.00059 22.5 0.5 1 23 372 394 372 394 0.98

10 12 1.1e-07 2e-05 27.1 1.0 1 23 400 422 400 422 0.97

11 12 0.00091 0.17 14.7 5.3 5 23 431 449 428 449 0.95

12 12 0.0013 0.23 14.3 0.2 1 23 455 477 455 477 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	4.5	10.2	0.1	2	23	149	170	148	170	0.94
2	12	0.0011	0.2	14.5	1.5	2	23	177	198	177	198	0.97
3	12	6.7e-07	0.00012	24.6	0.8	1	23	204	226	204	226	0.96
4	12	0.00021	0.038	16.8	0.7	3	23	234	254	232	254	0.96
5	12	3.3e-06	0.0006	22.4	0.8	2	23	261	282	260	282	0.97
6	12	0.00017	0.031	17.1	7.8	1	23	288	310	288	310	0.97
7	12	1.5e-06	0.00028	23.5	3.8	1	23	316	338	316	338	0.98
8	12	2.9e-06	0.00054	22.6	0.8	1	23	344	366	344	366	0.98
9	12	3.2e-06	0.00059	22.5	0.5	1	23	372	394	372	394	0.98
10	12	1.1e-07	2e-05	27.1	1.0	1	23	400	422	400	422	0.97
11	12	0.00091	0.17	14.7	5.3	5	23	431	449	428	449	0.95
12	12	0.0013	0.23	14.3	0.2	1	23	455	477	455	477	0.95

Sequence Information

Coding Sequence: atggAAGACTTCAATTTTATCGATATTGAGACAGTGTGCAGAGCTTGTCTACAGGATTCCAAAGACGTGTCGCTTATCTACGAAGTAGGAGTTCGGGAAATGTTCACAGCCTGTACATCACTTGAGGTGAGTCTTGATGACAAACTACCCAGTTTAATATGCAACCAATGCAAAGCAGAATTGATGAGAATTCAAGCCTTCAGAGATGTCTGCATCCGATCTAATAACATCTTGCAGCAATACCTCTCTCGGTATAAGATAGAAGAAATCGACTTCAACCTGAACGAATTTCTTAGAAGTGATTTTCCAGATACCTGTGACATAATCAAAGACACTGACACCCCCGATATAGCAGACATAGAAGAGATCATACAGGAAGAAACAAAAAAAGATGAAGAACTCCGAGCTGCCTCGGAGGAAGCAAACgcaaaagaaaaaataaataaatgctaCATATGCACGGAAAGTTTTGAAATAGAATCGGATTTAGAAATACATAAGATCGCTCATCCACAAGATGGTATACCATACTGTACCTTATGCAAGAAACAGTATAAAGATTTGAAGGTGTTGAAGAGACATGTTAGGATTCATATGGCGGTCAAGCCTTTTCTTTGTGAAGTGTGTGATAAAAGCTTCACAGAGTCTGGTAGCCTTACAAGACATCTTCGCAAACATCGTGGAGAAAAGCGCCATTTATGCAATATGTGCGGCAAGGGTTTTTACGAGGCTAATGTGTTGAGTGTGCATATGCGCACCCACACAGGTGAGAAACCCATTGAATGTCAGACGTGCAATAAGAAGTTCTCTGATCCAAACGGGCTGAGGAGTCACATGAAGTCCCACAGCGGAGAGAAACGGCATGTTTGTAATGTCTGTCATAAATCATTCTCACACTCTTTTGTGCTCAAGAAACATTATAGGGTGCACAGTGGTGAGCGACCTTATGTCTGCACTCACTGTGGCAAATCATTTACACAGAGTCACTATGTAGCTGTCCATATGCGCCAGCACACAGGGGAGCTGCCGTTTGTCTGTCCTGTTTGCAACAAAAGGTTTTCACAGAACAGCCAAAGAGACATGCACATGAGAGTTCACACAGGATACAAACCCTATATATGTTCTGTTTGTAATAAAGCTTGTGCTAGATCGGGAGATTTGGCGACGCATATGCGGTCTCACACTGGAGAAAAACCCTTTGCTTGTCCGGTATGTCCAAAACGCTACATCACCTCAAGCCACCTGAAGGTTCACATGCGTTCACACAGCGGTGAACGTTTACACCATTGCCACTGTGGAAAATCCTTTGTAGAAAGCCAAAGCCTCAAGGCTCACATGCGAATCCATACTGGTGAAAAACCTTACCTGTGTAGCACATGCGGTAGCCGCTTTGCCCAGTCTGGACAACTTGCGACCCATGCCAAACTTCATGATAAGGACAAGCAAACACCCAACGTTGACCCTTGCAGTACTCCACAAGATAAGATACAAAACCTTGATATTCTCATTTCTTAA
Protein Sequence: MEDFNFIDIETVCRACLQDSKDVSLIYEVGVREMFTACTSLEVSLDDKLPSLICNQCKAELMRIQAFRDVCIRSNNILQQYLSRYKIEEIDFNLNEFLRSDFPDTCDIIKDTDTPDIADIEEIIQEETKKDEELRAASEEANAKEKINKCYICTESFEIESDLEIHKIAHPQDGIPYCTLCKKQYKDLKVLKRHVRIHMAVKPFLCEVCDKSFTESGSLTRHLRKHRGEKRHLCNMCGKGFYEANVLSVHMRTHTGEKPIECQTCNKKFSDPNGLRSHMKSHSGEKRHVCNVCHKSFSHSFVLKKHYRVHSGERPYVCTHCGKSFTQSHYVAVHMRQHTGELPFVCPVCNKRFSQNSQRDMHMRVHTGYKPYICSVCNKACARSGDLATHMRSHTGEKPFACPVCPKRYITSSHLKVHMRSHSGERLHHCHCGKSFVESQSLKAHMRIHTGEKPYLCSTCGSRFAQSGQLATHAKLHDKDKQTPNVDPCSTPQDKIQNLDILIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -