Telo048087.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tillus elongatus
Gene Symbol
-
Assembly
GCA_964006375.1
Location
OZ023265.1:180371350-180403485[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00051 0.094 15.5 1.1 1 23 141 163 141 163 0.99
2 16 0.00033 0.062 16.1 4.7 3 23 171 191 170 191 0.98
3 16 8.5e-06 0.0016 21.1 1.6 1 23 199 222 199 222 0.95
4 16 0.00036 0.067 16.0 0.7 1 23 314 336 314 336 0.98
5 16 7.2e-06 0.0013 21.4 5.2 3 23 344 364 343 364 0.97
6 16 0.00034 0.062 16.1 4.2 2 23 384 406 383 406 0.96
7 16 0.00062 0.11 15.3 3.7 1 23 473 495 473 495 0.95
8 16 0.00013 0.024 17.4 1.6 1 23 501 524 501 524 0.93
9 16 9.7e-06 0.0018 21.0 1.5 1 23 529 551 529 551 0.98
10 16 4.3e-05 0.0078 18.9 0.3 2 23 561 582 560 582 0.97
11 16 5.8e-08 1.1e-05 27.9 2.0 1 23 589 611 589 611 0.98
12 16 4.6e-05 0.0085 18.8 1.6 3 23 623 643 621 643 0.92
13 16 0.00015 0.028 17.2 4.4 1 23 649 671 649 671 0.99
14 16 1.7e-06 0.00031 23.3 2.0 1 23 677 699 677 699 0.99
15 16 1.2e-07 2.1e-05 27.0 0.2 1 23 705 727 705 727 0.99
16 16 0.00038 0.069 16.0 0.1 1 23 733 757 733 757 0.92

Sequence Information

Coding Sequence
ATGATAAGCAAAGGGACTCAAGTGATGGACAAACTTTGTCGCTCTTGTATGGGTGAAAAAGAAAACATGTTAAATGTTTTCGAAGAGAAACAAGAAATTGGTGATATGACTATACAGCTCTCTGACATGCTCATGGCATGTGCATCTGTACAGgtATCCTCTGATGATGGACTGCCTTGTTTGCTCTGTACAATTTGTAAAGATAAATTAAATAATGCTTATGATTTCAAAATACAGTGTGAAAGATCTGATGTACAGTTAAAAAAACTAGCAGAAAATAAAAACCTGAAGGAAGAGGAAATAGACATTGTAGTTCACCCAGATCTTAGTCCAGTACATTATGATGATGATAACTTTGCCGATTCGGAAAGTGAAGATGATAGGAGTCTCGAGGAGAGAAAGCGTGATTCTTTGGATTCATTCAGATGTAAGTTTTGTGCAAAAGTTCTGGCGACAAAGAAAGGCTTACGAATCCACCTTAGAAGACACACAGGCGATAAAATGAGGAATTGTCATGTCTGTAATGCACAATTCACAACAACCAACCATTTGATTAGACACATGCAAACCCACGATAAGAAAATAGAACATGCCCATGTTTGTCCGATATGTGGAATGTCATTTCAGAGGCCTTATCATCTTCTCAAACACAAAAGAGCTGAGCATAGGAACCATCATgcagagaaaaataaagaaaatcacACGGAAAATACAGAGCATGTTGAACCAGATATGGATGctaaaaaagaagaaaatgaGCCCGATCTTGGAGATAATGAAGATATGGCAGAAGTGGTTAATGACAATGATGATAATGATGACTACGATAATGACAATGACAacgataataatgataatgatgtaGATGAAGATTACACCAGCGAAACTGAAAGCAAGGTTAAATTAGAAGGTGATGAAGACAAGAAATCAGATGAAACGTTTGAATGTAAAGTTTGTAATAAAATTATGACAACTTATGTTGGTTTGAAGATACATATGAGACGGCATACTGGTGCAGACTTAGCTAATTGCAAGCTTTGTGAAAAATCGTTTACTAAAACAAGCCATCTTAAGCGTCATATGCGTATTCATGGAGTTAAAGATGAAAAATATTACAGAACCCATGAACGAACTGAGAAGGAGATACTGGAATGTGAATATTGTGACAGAAAGTTCAAGTATCGAAAAAGTTTCTTTCATCACATTAAATCTGAGCATGGGATGTCTGAAGATAGTGATGTTCCATTGAGCAGCTACATTGCTAAGAAACAGGAGGACAATGAAACACCCAGTAATGATGATAACAAGACTGAAAACCCAGATAAACCCAGTGGCAATATAGATCAGCCTTCTGAGCTTGGTGACTTACCCGAGTTCGAACCCAAACCCCTATCCAATACATCACAACGTCGTTCACATGATTGTCATGTTTGTGCTGCAGTGTTCACACGAGCCAATCACTTGACGCGTCATATGACACTGCATAGAGCAATCTTGGTACATAAATGTGAAAGATGTGATAAAGCCTTCGCCACCACAGAACATCTGGAGAAACATGTGGAAGAGGAACATATCAACAAGCCTTATGTGTGTACAAGATGCAATAAGCCGTTCAGTAGAGGCGAGCACCTCATACGGCATCTTAAAGTGCACCAGACGAACGACGAGAAGGATTCACTCAAGTGTTCGATATGTGAGGAGGTATTTACTAAatctGAACTACTAGCCCGTCATACTAAGGTTCATTTACTCCAGGACAAGCGGCATGTATGCAATGAATGTGGTAAAGCATTTAACAGATTAGATAACTTGAAGACCCATCAAAGAACTCATACAGGCATGAAGGATGCTTCAAAACTACATTTGTGTATTTATTGTGGCAAAGAATTCAATAATTCGAGCAACATGattgTCCACATGAGACGTCACACTGGTGAACGCCCCTACAAATGTTCAGAATGCGGGAAAGGGTTTCCCAGGTCACATGATCTTAAATGCCATGAAAGAACACACTCCGGAGAAAAGCCGTATACATGCACAGTATGCGGAAAATCATTCAATAAGAGCAACAAACTTTTGCGTCACACCCGAGTTCACACTGGCGAACGTCCATATGTGTGTAACATTTGTGGTCGTGCTTTTACCCAGTCCAATGATCTGGCTCTTCATATGAGACGACACACCGGGGCCCGTCCATATGCATGCGGCATGTGTCCAGCTCGTTTCATCCAGTCAGGGCAGCTCAAGGCTCATCGCAGATCCACAGGCCATTGGATGGAAACCCAGCCTGATCTTAAAGGCGGCCACAGAGTTGAACCAGTCACACCAGCTTGCGAACCTACACCAATACGCTTTAAATCAAACAGCAAGTTCAAGAAAGAGCATAACATTGAGATCAAAGAACAAAACATTGATATAAAAGAAAGCAAGCTGCTGCCACCTGTGGGTATGATGAATAATTTGAATATGCAAAGCGGGATTCCACCGCTTCTCATAGATGCTTCCAAGATCATCGAATTTCAACATTCTGGTCTGCCAAGTATAGCATCAGTCATTAATGTGGCAGCAAATAACGGCGATATGAAGTATCAACCTGAAATGGCTCATTACAATAACGTTAATTTGAAGTGCGAGAATATGGTGGAGGAGCAGGAACACCAAGCTCCTCTTGGTCCTACAGCTACATTCCAGCCGAATAATTCAGTTGTGAGTTATGCCAGTGTTGCGGAAACTTCGGGAACATACACAAACACCACATACAGTTTTCAGAATTATGCTTAA
Protein Sequence
MISKGTQVMDKLCRSCMGEKENMLNVFEEKQEIGDMTIQLSDMLMACASVQVSSDDGLPCLLCTICKDKLNNAYDFKIQCERSDVQLKKLAENKNLKEEEIDIVVHPDLSPVHYDDDNFADSESEDDRSLEERKRDSLDSFRCKFCAKVLATKKGLRIHLRRHTGDKMRNCHVCNAQFTTTNHLIRHMQTHDKKIEHAHVCPICGMSFQRPYHLLKHKRAEHRNHHAEKNKENHTENTEHVEPDMDAKKEENEPDLGDNEDMAEVVNDNDDNDDYDNDNDNDNNDNDVDEDYTSETESKVKLEGDEDKKSDETFECKVCNKIMTTYVGLKIHMRRHTGADLANCKLCEKSFTKTSHLKRHMRIHGVKDEKYYRTHERTEKEILECEYCDRKFKYRKSFFHHIKSEHGMSEDSDVPLSSYIAKKQEDNETPSNDDNKTENPDKPSGNIDQPSELGDLPEFEPKPLSNTSQRRSHDCHVCAAVFTRANHLTRHMTLHRAILVHKCERCDKAFATTEHLEKHVEEEHINKPYVCTRCNKPFSRGEHLIRHLKVHQTNDEKDSLKCSICEEVFTKSELLARHTKVHLLQDKRHVCNECGKAFNRLDNLKTHQRTHTGMKDASKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSECGKGFPRSHDLKCHERTHSGEKPYTCTVCGKSFNKSNKLLRHTRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGARPYACGMCPARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVTPACEPTPIRFKSNSKFKKEHNIEIKEQNIDIKESKLLPPVGMMNNLNMQSGIPPLLIDASKIIEFQHSGLPSIASVINVAANNGDMKYQPEMAHYNNVNLKCENMVEEQEHQAPLGPTATFQPNNSVVSYASVAETSGTYTNTTYSFQNYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-