Basic Information

Gene Symbol
-
Assembly
GCA_964006375.1
Location
OZ023268.1:48855721-48856947[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-12 9.4e-08 34.2 0.7 3 114 11 117 9 119 0.83
2 2 0.43 1e+04 -1.5 0.1 63 97 187 220 132 225 0.63

Sequence Information

Coding Sequence
ATGGCGAACATTGCAACACCGCACCTTGTTTCGGAAAAGTGGCTGACAGTGTCAGAGTATCACAGCATTTTGCTGAATATCGAAGAGATATCTGTAACAGAGACACCTCCTGTACTACCAAAACCTGGCGATATTTATATTTTTGGAACGAACAATAGCTCCAAACGCCATGACTGGAGGTCTGATCAGTACAGATGGCGAAACAAAGGAGTAAAAAATCTGCCTGCCAAAAATCCTCTTTTAGTATGTTATTACTATGCCACATTTGAAGGAAAAGGCTTCAATAAAAGGGCTTACATGTTTTATGACTTTGTTGGCACTGTAAAGCATTTAACATTAATACATTATGTTGGCAGTTTAGGGAACTTAATCCATAAAGCGCATGGTAATAGAAAAAAGAATATGCACATAAAGCACATAATGACTGCAAAATCACAAATCACGTCTCAAAAAGACAAAGTAAAAGACAAACCACATAATGTTTATAAACGTTTGGTAGTTGAGGATGTTCATCCGGCACATGCGAGAGTCCTGCTACCCAGAAATAGAATGCAGGTTAGTAATACAATTCGCAAAGAAAGAGAACGTAAGTTACTATCAACTGATGACATAATCGGTTTATATTTAATGCGTGATGAAGTTGGggaatttattagaaaaattgaGTTACTTCCGTTCTTCTGTACTGTCACCTTCAGTACTGAAATGCTAGCTACTTTCTGTGAATTGAAATATAAATCGGTATTATTTTACGACACAACATTCAATCTAGGAGACTTCTATGTAAGTCCATTGACATATAAATATGATTATTTTGTAGATAGTCCTGTGATACCATTGGCATACATGGTTCACCACAGAAAGAATGCAGAAGTGCATGAAACTTTTTTTACATGCGTAAAAAAGGCTTACCCTGACATAGTAAACGTCCCAATAGTTACGGATAGGGAAGGTGGAATTTCAGTAGCAATACGAAACGTTCTAAAAAGTGATAAACATTTTTACTGCTGGAACCACATACAACAAGATATAAGGCACTggctaaaaacacaaaaatgtataGATGCAGATGATATTAAAACTTATGTTAGTCACACCTGGGATCTCCTTGACAGTGATTCTCAAAGCGAATGTCAAGAAAAATATAGTGCAATGTCTTGCCAATGGAGTAAGGagttcaaaaaatattttgacaaaaatattaTTGGTGATGTTTATAAAAGTTga
Protein Sequence
MANIATPHLVSEKWLTVSEYHSILLNIEEISVTETPPVLPKPGDIYIFGTNNSSKRHDWRSDQYRWRNKGVKNLPAKNPLLVCYYYATFEGKGFNKRAYMFYDFVGTVKHLTLIHYVGSLGNLIHKAHGNRKKNMHIKHIMTAKSQITSQKDKVKDKPHNVYKRLVVEDVHPAHARVLLPRNRMQVSNTIRKERERKLLSTDDIIGLYLMRDEVGEFIRKIELLPFFCTVTFSTEMLATFCELKYKSVLFYDTTFNLGDFYVSPLTYKYDYFVDSPVIPLAYMVHHRKNAEVHETFFTCVKKAYPDIVNVPIVTDREGGISVAIRNVLKSDKHFYCWNHIQQDIRHWLKTQKCIDADDIKTYVSHTWDLLDSDSQSECQEKYSAMSCQWSKEFKKYFDKNIIGDVYKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-