Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_964006375.1
Location
OZ023265.1:163654026-163668571[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-16 7.1e-13 50.8 1.5 2 46 9 54 8 54 0.97
2 2 3.7e-12 2.6e-08 36.2 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGTATAATGATAAAAGGTGGTGTTTGGAGAAACACAGAAGATGAAATTCTTAAAGCAGCCGTAATGAAATATGGCAAAAACCAATGGTCTCGGATAGCTTCATTACTGCACCGAAAATCGGCGAAACAATGTAAAGCTCGGTGGTTTGAATGGTTGGACCCTAGTATAAAAAAAACAGAATGGTCACGTGAAGAGGACGAAAAATTGTTACATCTTGCCAAACTAATGCCTACGCAATGGCGGACTATTGCTCCAATCATTGGGCGTACTGCCGCACAGTGTTTGGAGAGATACGAGTATTTATTggaCCAAGCCCAGAAAAAGGAAGAAGGTGAAGATGCAACAGATGATCCGAGAAAGCTTAAACCTGGTGAAATTGATCCTAACCCCGAAACTAAACCTGCAAGGCCAGATCCAAAAGATATGGATgaagatgAATTGGAGATGCTGTCCGAAGCCAGGGCCCGTTTGGCTAATACTCAAGGTAAGAAAGCAAAACGAAAAGCAAGAGAAAAACAATTGGAAGAAGCTCGTAGATTAGCTGCTTTACAGAAGCGAAGAGAATTACGTGCAGCTGGAATTGAAGTCGCACCAAGGAGAAAAAAGAAGCGAGGTATTGATTATAATGCAGAAGTTCCATTTGAAAAGAGACCAGCACCAGGTTTCTATGATACATCAACTGAAGTAGTTGACCCTATGGCACCAGACTTTTCAAAAATGCGTCAACAAAATTTAGATGGTGAACTTCGGAATGAGATTGAAGAGaGGGAACGAAAGAAGGACAAACAGAAATTGAAAAAACGCAAAGAAAATGACATTCCTCAGACTATGCTACAAAATCAGGAACCTGCCAAAAAACGTTCAAAGCTGGTACTACCTGAACCTCAAATAACTGACCAGGAACTCCAGcaggtaatcaaattgggcaaaGCAAGCGAAGTAGCCAAAGAAACTGCAGCCGAAAGTGGTATTGAAACGACAGATACACTACTCAACAATTATACTGTAACACCTCAGACAGCAGCAACACCGAGGACTCCTGCTCCACAAACTGATAGAATCTTACAAGAGGCACAAAACATGATGGCATTGACCCATGTAGATACACCATTAAAAGGTGGTTTAAATACACCCCTACATAACTCCAACTTTAGTGGTGTCATGCCTCAGTCACAAACCATAGCCACACCAAATACTGTTTTGGCAACTCCATTTAGGTCATCCAGAAGTGATGGGGTAAGTACACCGGGAAGTGCTGGTTTCATGACACCCAAATCTGGAGCTTTGGTTCCCACCAACCAGGCAAACATGACACCATCAGTGCGTGATAAATTGAATATTAATATTGATGGAACTATGTCTGTTACCAGCACACCTATGTCCGGTCGGATGAATCAAAATGTCATTAAAGAACAATTAAAAATGGGATTAACTGGCTTACCATTGCCAAAGAATGATTATGAGATTGTAGTACCTGATAATGAAGAAGGACCAGAGCAACAACAAACTCGGCAGAACACGATTGAAGATCAGGCAGATGTAGATGCACGTTTTCAAGCTGAAGCCAAAGCTAAAGCTGCCAAAGAATTATTGACAAGGTCACAAGTAATACAGCGAGATTTACCTCGACCGCATGATGTTAACTTAGCAGTCCTGAGACCCCCACAAGAAAGTCATTCGCTAACTGATATGCAAAGAGCAGAAGAACTCGTTAAAAATGAAATGTGTATAATGTTACAGTATGATAGCTTGAAGAATCCGCTTTCTAATCCAAAACGATCTAACTATACTCAAGCGCAGCAACTTGCATTTCTAGAACAACACCCCTATAAAAGTTTTGACAAGCACGATATAGAAACAGCTAAGGCAATGTTAAAGCGTGAAATGGACCTGGTAAAGTATGGAATGAATCACGGCGAGTTACCATTAGAAGCATATACACAGGTTTGGGAAGAATGTTTGAGCCAAGTTCTTTTCTTGCCTAATCAAAATCGTTACACAAGGGCTAATCTCGCCAGCAAAAAAGACAGATTAGATTCAGCAGAGAAGAGACTTGAACAAAATAGATCTCACATGGCGAGTGAAGCCAAGAGGGCGGCGAAAATGGAGAAAAAATTGAAGATATTGACAGGTGGGTATCAGTCGAAAGCACAAGCGTTGATGAAACAGTTACATGATCTCTACGAACAAACTGATCAGGCACATCTTGAATTGAATACGTTTAGGTTCCTGCAGGATCAAGAGAAAGTTGCTTTACCAAGAAGAGTACAGTCGCTCACAGAAGATGTAAATAGACAAACAGAAAGAGAGAGAGCCCTACAAAAACGTTATGCAGAGCTACAGCAGCAGATCAAGGAGCTTCAGGAGAAGCAGTTTCAAGCCCAGCAAGTATTATTGCCTGCCCAGCAAGCATTATTGCCTGCCCAGCAAGCATTATTGCCTGCCCAGCAAGCATTATTGCCTGCCCAGCAAGCCACAGTGCCAACAAATAGCACTCAAGTTATAGAATCAACATTAAATCTGGATGAGTCAGAGAATGATGTTATTTGTACAGTAAGGAACTAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDATDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVAPRRKKKRGIDYNAEVPFEKRPAPGFYDTSTEVVDPMAPDFSKMRQQNLDGELRNEIEERERKKDKQKLKKRKENDIPQTMLQNQEPAKKRSKLVLPEPQITDQELQQVIKLGKASEVAKETAAESGIETTDTLLNNYTVTPQTAATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSNFSGVMPQSQTIATPNTVLATPFRSSRSDGVSTPGSAGFMTPKSGALVPTNQANMTPSVRDKLNINIDGTMSVTSTPMSGRMNQNVIKEQLKMGLTGLPLPKNDYEIVVPDNEEGPEQQQTRQNTIEDQADVDARFQAEAKAKAAKELLTRSQVIQRDLPRPHDVNLAVLRPPQESHSLTDMQRAEELVKNEMCIMLQYDSLKNPLSNPKRSNYTQAQQLAFLEQHPYKSFDKHDIETAKAMLKREMDLVKYGMNHGELPLEAYTQVWEECLSQVLFLPNQNRYTRANLASKKDRLDSAEKRLEQNRSHMASEAKRAAKMEKKLKILTGGYQSKAQALMKQLHDLYEQTDQAHLELNTFRFLQDQEKVALPRRVQSLTEDVNRQTERERALQKRYAELQQQIKELQEKQFQAQQVLLPAQQALLPAQQALLPAQQALLPAQQATVPTNSTQVIESTLNLDESENDVICTVRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01344846;
90% Identity
-
80% Identity
-