Telo037462.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tillus elongatus
Gene Symbol
RTase
Assembly
GCA_964006375.1
Location
OZ023264.1:143924084-143935142[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-07 7.8e-05 24.7 0.0 5 36 798 829 796 832 0.94

Sequence Information

Coding Sequence
ATGGTGTGCTCTGGACGCTCTAAACATTTGTCTCTCTATTACCAAAACGTTCGTAGCCTTAATAATAAACTGTCGGAGCTACATGTGAATATCTTGTCGTATACTTTTAGTCTAGTTGCTATGACTGAGACTTGGCTAAAGACGGGTACGTATAGTGGGGAGTTTTTCCCTTCTCACTATAATGTTTTTAGGAAGGATAGGGAGTATTCTGTCACCGGTCAAGCCAGGGGCGGGGGTGTGTTGTTGGCAGTGTGTCGGGACCTTTCTGCAACTGAAATTAACTTGGCTGGCATTTGTGCCGTAGTAAATCCCGTCATTGATATCCTTTGCGTTAAAATCAGTGGGTTGTCAAGCAAATGGTATGTCTTCGTTGTTTATGTTCCACCGAACATTAGTCATGGTGATTACGATTCTCTTTTCTCATACATTGGCTCCTTGGAATTATTTGATGATAATTGCTGTGTACTAATTCTAGGTGATTTCAATCTACCTGAATTTCACCATTTGCGTAGTGTTCAGTACTCTTCAAGTGGCTCTGTCTCGGCTCTTAGAAATCTCATTTCTTTTTTGGACTTGAGTGAGTATAACAACATTGTCAACTGTGATAACAGAGTACTGGATCTCGTTTTGTCTAATAGGCTGTGCACGGTTGAGCGTTGCGATGATCCACTTGTAAGGGAGGACGCCTTTCATCCGTCGTTGAAAATTTCGCTGGACCTGATTGATGGGTTCTCCCGTAATAAATGTATTCCGTCCAGGGTTGTGTCGTCTTACAACTTTCGCAAAGCGGATCTGAGACTTCTTTATGACACGCTCCTGCGTGTGGACTGGTCTTTCCTGGTGAATAGTCATGACGACCCCGATGTGCTGTGTGAACTATTCTACAGCAGAGTATACAATGTCTTGGATATGCACATCCCGAAAACAGTGTCTAGACGCAGTTCTTATCCACCATggtttacaaattttattatcaGGAAGATTAAGCTTAAATATCGTCTCTGGAGGCAGTTTAAGCGTCATGGCGATCAAAATATCTATGTGGAATTCAGTAGGGTGAGAGCTTCAGTCAAGACTGATATTGGAACACAGTTCAGAGAGTATGTTTCCCAGTGTAAGTCTGGCATTTCAAATGAACCTCGGAAGTTTTggaattatattaattctaagaAAGGCTCTAACAATATTCCAAACGTTATGTATAACGGCACAAGTGAATTTAGAGGTGCAAAATCCATTACTGAAGCATTTGCCGGAGTTTTCAAGGAGACCTATTTACCTAGCTCCTCAGCTGACAACATGCCTTATTCCCCAGTCATTTCAAATAATACTTTGAATATTACCTCTGTTTCAGAGGACGATGTACTTACTGCTCTGAGAGGATTCAAACCTTCCTTGACCGCGGGCCCAGATGAGATCCCCTCCTTTATTTTGAGAGACTGTGCTTCTGTTTTTGCCTACCCTCTTACTTTAATATTTAATAGCTGCATTCAACAAGCCAAATACCCGTCTCTTTGGAAGATATCTAAGTCGTGTCCTATCGGTAAGGGTGGTAGTAGGACAAGTGTTCTTGAATACAGGCAGGTCATTATCTCGAATAACTTTGGTAAACTTTTCGAATCGGTACTGCATCCCTTAATGTATAATCACGTAAAGGTGATGATCGATCCTGCCCAACACGGTTTCATACCTGGTCGGTCTactgtaacaaatttattttctttcacccaATACGTTTCGACATCTTTTCAGCATAGATCTCAGGTGGATGTCATATACACGGATATTTCTAAACCTTTCGACCGGCTTGACCATGGCATCCTATTGCATAAGCTTAAATCTTTTGGTTTCTCTGATCATTTGATAGAACTGTTTAGATCATACCTGAGTAATAGGAGTCAATATGTTGCGGTGGGAGGTGTTACATCGTCAGAGTTCATGGCTACATCTGGAGTCCCTCAAGGATCTATTTTgggtcctttattattcaatattttcataaatgatgtggtggtggacaatgatgtcaattatttgctgtatgctgacgaccttaagatttttttggaagtgaatAACTTGTCTGATTGTCATAGAATTCAAGCTGCTCTTGATGCTGTCGTAAAGTGGAGTTATGAAAACCGGCTATCACTCAATGTTCACAAGTGCTATGTCATGACGTTCACTCTCAGGAAACTTCCAGTGCGGTTTGGTTATAGCATGCATAGTTCGTATCTACCAAAAAAGGAGCTGATTACTGACCTGGGGATTACTTTTGATTCCAAATTGTCGTTTGCTCCACATATTTTGAGTATAACATCGGACGCTTATAGAATGTTAGGATTTGTTATAAGAACTTCAAAAGACTTTGTGTCAATCAAAACCATGgATATTGAAAAAGCTCTTGAACTAATCAAGAAAGGAACCTCAATCAGAGAAGCAGCAAGATATTTTAAGGTTCCAAGAGCAACCCTGCAATTCAGGAGAAGTACCAAATTTATCAAGTCAAATTTAGGTCCGAATCCTATTCTCACACCCTATGAAGAAGAACTTCTGGTTAAATGGGTATTCGAGAACCACAAGAAAGGATTTCCTCGTCGCAAAGAGGACTTGCAAGAATCAGTAAGGTTATTCTTAGAGAAAAATCCACGTCccaatccatttataagaaatcatccaggagatgGACAGCATTGCATCAACAACCATTCAGAAGAATTCGGTATGCTGTACAGTATGTGGAAGAGATTCAAACCAAAAGAAGACATTTCTGAAGTATCGGTAGAAGAAATAAATCCCACACATATCAATCCTAATGAATTGTCACAGGAAACTCATGCATCACCAATAGCCAGAGAAAGCACAGACGGACTTGATATTAGTGCTAGGCTAAAATCAACCAGCGCAGCAAACCTCGATACCTATTTGGAAAACAATGACTCAACCCTTACCTTGAGAAATATCAATATAGAAGAAATACCAATTGTTTTCGAAGATTATAACGGTGACATTTTTCAACTAACACAACCATGTCAATCTGGAAAACTTGTGAGTGATCATAATGCTTCCGGAATATGCCCTACAACGGACTCCTGTTTATATAAGATAGACCATTTAACCATGGCCTCTGTAGATACTGAAAATACTTCAGCAGATGTAAGTCTTGATACATTCTTACAGTGGCCTCAAACTCCTGCGAGAAAGGGTAAGAGGCAAAGCGAAAGACTTTCGTTTGTCTTAACATCAACTCAATGGAAGAAAATCATGAGTGATAAGGAACAAactaaaaaagagaaagaaactgagaaagaagagaggaaagttaaaaggcttgagaataaattgaggaaaacagcagagaacttcaagaaattagaaaacaaaaatgttaaaaagcaatattttaagagtaaaaacaaatgtagatcagaagcgtcaaatccacatgacgatgtgaatgaaaatataagaaataggGAAAACATAGGACGTGAGTTTGATGATGAAGAGAACACATCGGGCAGCCAACAATACCAACTTTTAAGAATACAACAAGCCACCAAACATCTTTTTGGTAGCAGTGACACCAAGAATGAATACAGGTCTCCAGATGGTACAAGTTCAAGGATACATATTTTATCCAATGTTAGGTTAGAGAATGCACAAGAGACTTGTGGTTTGAGCTTAGAAGATAATGTGAGAAAAATTAACGGCTTATGTTTTACTTGCACCAACAATATGAATGAATCAAATATTGGTATAAAATGTAAATCCTGCACCAGAGCTTTTCATCTGAATTGTATAAGGAAAATGAATTTACATAAATCAAACTCTACTATATTTCATTGTAAATCGTGCTTAAAAATttccattaattga
Protein Sequence
MVCSGRSKHLSLYYQNVRSLNNKLSELHVNILSYTFSLVAMTETWLKTGTYSGEFFPSHYNVFRKDREYSVTGQARGGGVLLAVCRDLSATEINLAGICAVVNPVIDILCVKISGLSSKWYVFVVYVPPNISHGDYDSLFSYIGSLELFDDNCCVLILGDFNLPEFHHLRSVQYSSSGSVSALRNLISFLDLSEYNNIVNCDNRVLDLVLSNRLCTVERCDDPLVREDAFHPSLKISLDLIDGFSRNKCIPSRVVSSYNFRKADLRLLYDTLLRVDWSFLVNSHDDPDVLCELFYSRVYNVLDMHIPKTVSRRSSYPPWFTNFIIRKIKLKYRLWRQFKRHGDQNIYVEFSRVRASVKTDIGTQFREYVSQCKSGISNEPRKFWNYINSKKGSNNIPNVMYNGTSEFRGAKSITEAFAGVFKETYLPSSSADNMPYSPVISNNTLNITSVSEDDVLTALRGFKPSLTAGPDEIPSFILRDCASVFAYPLTLIFNSCIQQAKYPSLWKISKSCPIGKGGSRTSVLEYRQVIISNNFGKLFESVLHPLMYNHVKVMIDPAQHGFIPGRSTVTNLFSFTQYVSTSFQHRSQVDVIYTDISKPFDRLDHGILLHKLKSFGFSDHLIELFRSYLSNRSQYVAVGGVTSSEFMATSGVPQGSILGPLLFNIFINDVVVDNDVNYLLYADDLKIFLEVNNLSDCHRIQAALDAVVKWSYENRLSLNVHKCYVMTFTLRKLPVRFGYSMHSSYLPKKELITDLGITFDSKLSFAPHILSITSDAYRMLGFVIRTSKDFVSIKTMDIEKALELIKKGTSIREAARYFKVPRATLQFRRSTKFIKSNLGPNPILTPYEEELLVKWVFENHKKGFPRRKEDLQESVRLFLEKNPRPNPFIRNHPGDGQHCINNHSEEFGMLYSMWKRFKPKEDISEVSVEEINPTHINPNELSQETHASPIARESTDGLDISARLKSTSAANLDTYLENNDSTLTLRNINIEEIPIVFEDYNGDIFQLTQPCQSGKLVSDHNASGICPTTDSCLYKIDHLTMASVDTENTSADVSLDTFLQWPQTPARKGKRQSERLSFVLTSTQWKKIMSDKEQTKKEKETEKEERKVKRLENKLRKTAENFKKLENKNVKKQYFKSKNKCRSEASNPHDDVNENIRNRENIGREFDDEENTSGSQQYQLLRIQQATKHLFGSSDTKNEYRSPDGTSSRIHILSNVRLENAQETCGLSLEDNVRKINGLCFTCTNNMNESNIGIKCKSCTRAFHLNCIRKMNLHKSNSTIFHCKSCLKISIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-