Telo043963.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tillus elongatus
Gene Symbol
-
Assembly
GCA_964006375.1
Location
OZ023265.1:94033040-94035541[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-07 3.3e-05 25.8 0.0 4 36 18 50 16 53 0.94

Sequence Information

Coding Sequence
atgccaaaagtcagagtgggtgacaaatatacaaaaaaatattgtgatcaggatattgaaaaagctcttgaactaatcaagaaaggaacctcaatcagagaagcagcaagatattttaaggttccaagagcaaccctgcaattcaggagaagtaccaaatttatcaagtcaaatttaggtccgaatcctattctcacacccaatgaagaagaacttctggttaaatgggtattcgagaaccacaagaaaggatttcctcgtcgcaaagaggacttgcaagaatcagtaaggttattcttagagaaaaatccacgtcccaatccatttataagaaaTCATCCAGGAGATGGTTGGTACAAAGCCTTTCTTCGTCGTCATCCAGAGGTAACAATACGTATATCTGAGGCAGTTACTGCCGCAAGTGCAACCATTTCAGTATCAGACCTTAAAAAGTGGTTTGGTAACATTTATGATTATCTAAAATCAAAAGATCTGGAAGGCATATTAAAAGACCCAGAACGAATACTTAACGGAGATGAGACATGTTTTAACTTGTGtccgaaaaatacaaaagttcttgCTCCAAGAGGAAGCAGAAATGTTTATGAGGTTGAACACGCGCCGTCCAAAACAGCAATTACAGTAATGTTTACTTTCACTGCATCTGGTAAAGTTACACCACCAATGGTGATTTACCCTTATAAACGGTTGCCTGCTAATATCGCTAAAACAGTTCCTGATGAATGGGGAGTTGGCTTGAGTGATTCTGGGTGGATGCGTGCTGAGatattttttgaatatatttcaaacgtactgcacccctatttaaaaaaacataatgtgaaatttcccatcattctctttgtagacgggcacagcacacacttaacctatcaactaagtgaactttgtagtcaactggaaattatactgatttgcctttatcccaatgccacacgaattcttcagcctgctgatgtggcagccttcaaaccgataaaaaatggttggaagaaggcagtagttgagtggagacgcgaccataccaatgaaacattaagcaaagagcactttgcaacagttcttgaaaatgttatcaaaaacgttgcaaagtcaactatcatccaaaatgggtttaaagcttgtggcttgtacccatggaatccaaatgcgatagacgtcacaaaatgtttgggagctgctaaagtcaatacatacgaacaaactggtttgaaaaaaaattacgtcctgtcgtatccagcatttaaagaaattgttggtgaaaattatattaatgaatttcaaaaaggacagcattgcatcaacaaccattcagaagaattcggtatgctgtacagtatgtggaagagattcaaaccaaaagaagacatttctgaagtatcggtagaagaaataaatcccacacatatcaatcctaatgaattgtcacaggaaactcatgcatcaccaatagccagagaaagcacagacggacttgatattagtgctaggctaaaatcaaccagcgcagcaaacctcgatacctatttggaaaacaatgactcaacccttaccttgagaaatatcaatatagaagaaataccaattgttttcgaagattataacggtgacatttttcaactaacacaaccatgtcaatctggaaaacttgtgagtgatcataatgcttccggaatatgccctacaacggactcctgtttatataagatagaccatttaaccatggcctctgtagatactgaaaatacttcagcagatgtaagtcttgatacattcttacagtggcctcaaactcctgcgagaaagggtaagaggcaaagcgaaagacttccgtttgtcttaacatcaactcaatggaagaaaatcatgagtgataaggaacaaactaaaaaagagaaagaaactgagaaagaagagaggaaagttaaaaggcttgagaataaattgaggaaaacagcagagaacttcaagaaattagaaaacaaaaatgttaaaaagcaatatttgaagagtaaaaacaaatgtagatcagaagcgtcaaatccacatgacgatgtgaatgaaaatataagaaatagggaaaacataggacgtgagtttgatgatgaagagaacacatcgggcagccaacaataccaacttttaagaatacaacaagccaccaaaaatctttttggtagcagtgacaccaagaatgaatacagttctcaagatggtacaagttcaatgatacatattttatccaatgttaggttagagaatgcacaagagacttgtggtttgagcttagaagataatgtgagaaaaattaacggcttatgttttacttgcaccaacaatatgaatgaatcaaatattggtataaaatgtaaatcctgcaccagagcttttcatctgaattgtataaggaaaatgaatttacataaatcaaactctactatatttcattgtaaatcgtgcttaaaaatttccattaattga
Protein Sequence
MPKVRVGDKYTKKYCDQDIEKALELIKKGTSIREAARYFKVPRATLQFRRSTKFIKSNLGPNPILTPNEEELLVKWVFENHKKGFPRRKEDLQESVRLFLEKNPRPNPFIRNHPGDGWYKAFLRRHPEVTIRISEAVTAASATISVSDLKKWFGNIYDYLKSKDLEGILKDPERILNGDETCFNLCPKNTKVLAPRGSRNVYEVEHAPSKTAITVMFTFTASGKVTPPMVIYPYKRLPANIAKTVPDEWGVGLSDSGWMRAEIFFEYISNVLHPYLKKHNVKFPIILFVDGHSTHLTYQLSELCSQLEIILICLYPNATRILQPADVAAFKPIKNGWKKAVVEWRRDHTNETLSKEHFATVLENVIKNVAKSTIIQNGFKACGLYPWNPNAIDVTKCLGAAKVNTYEQTGLKKNYVLSYPAFKEIVGENYINEFQKGQHCINNHSEEFGMLYSMWKRFKPKEDISEVSVEEINPTHINPNELSQETHASPIARESTDGLDISARLKSTSAANLDTYLENNDSTLTLRNINIEEIPIVFEDYNGDIFQLTQPCQSGKLVSDHNASGICPTTDSCLYKIDHLTMASVDTENTSADVSLDTFLQWPQTPARKGKRQSERLPFVLTSTQWKKIMSDKEQTKKEKETEKEERKVKRLENKLRKTAENFKKLENKNVKKQYLKSKNKCRSEASNPHDDVNENIRNRENIGREFDDEENTSGSQQYQLLRIQQATKNLFGSSDTKNEYSSQDGTSSMIHILSNVRLENAQETCGLSLEDNVRKINGLCFTCTNNMNESNIGIKCKSCTRAFHLNCIRKMNLHKSNSTIFHCKSCLKISIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01442226; iTF_01442360; iTF_01442353; iTF_01442308; iTF_01442314; iTF_01442347; iTF_01442317; iTF_01442352; iTF_01442354; iTF_01442356;
90% Identity
iTF_01442360;
80% Identity
-