Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023266.1:142490939-142492615[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-07 4e-05 25.6 0.0 2 38 12 48 11 53 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-07	4e-05	25.6	0.0	2	38	12	48	11	53	0.93

Sequence Information

Coding Sequence: atGTCACAACGTGGGAAATACGGGAAATGGGTGGAGGAAAATATGAGGGAAGCCTTAATAGCCCACCAAAGTGGTGTTATGGGTTTAAATGAAATAGCCAGAAAGTATCAAATACCAAAGGCAACTTTAAAACGCAGAATTGACAATAAGAACAAAAATGCTCATGGAAGTGAGAAAAAATTTGGACGTGCCGCAGATATTCCACCAGAAATAGAGGAAGACATAGTAAACCATGTACTACAGCTTGAAAGAAGTCTGTTTGGAATCACTCGTAGTGATTTGAGAAAACTCGCATATGATGTCGCAGAAGCAAATGGAATTCCTCATAGGTTCAAGAATGGACAAGCCGGCAAGAAGTGGTACTATTGTTTCATGTCTCGACACAAAGAGCTATCGCTCCGCCAACCGGAGGCAACTTCATCGGCGAGGGCTTTAGGGTTCAGCAAAGAAAAAGTTGAAGCTTTCTTTGATTGCCTCACTGCTCTTTACGATGAACATAACTTCAGTCCATCTGAGATCTATAATGTTGATGAGACCGGTCTTTCTACAGTCCAGAGACCACAAAAAATAATTGGACAGAAGGGTAAGCATCAAATAGGATCTCTTACAAGCGGGGAGCGTGGAGTAAATACGACATGTGTTTGCTGCATTAATGCTGCTGGTATGTACGTCCCTCcgatgcttatatttaagcgCATTAGATTCAAAGATGAACTCAAAGAAGGTGCACCTCCAGAAACAGAATTTGCTTGCTCAGAATCGGGCTGGATAACAAGTGAGTTATTCGTAAAATGGCTAAGGCATTTCATTAATTTTGCGAAGCCATCTAAAGATAAGAAGGTACTTTTAATAATGGATGgtcataccacccatacaaaaaaTCTAGAAGCCATAACGTTAGCCAGGGAAAGTGGAATAATCATGTTGTCGCTACCAGCACACACCACCCACAGGTTGCAACCCTGTGACGTCTCATTCTTCAAGCCCCTTAGTTCGTATTACAACCAAGCAGCTGATAAATGGCTTCGTACGCACCCTAACCAAAATATTACGCAGTTTCAGGTGTCAAAATTACTTGGAGAAGCCTATGCCAAAGCTGCTTCAGTAGGAAACGCTGTAAGCGGTTTTGCGAAATGCGGCATATGGCCTTTAGATAGAAATGTGTTTGATGATAGTGAATTTGTTTGTCTTCCCAATGTGAATATGGATCCAACGAATGCGTCAGAGGACACCTCTTCAGCAAACGAAGTGACCCATCGTGCTCTCATTAACATCAACAATGTAACCCAACATGCATCCACATCTACAGACACTTCGGTAGGAGGAACATTAGAGGCAGAATGCTCCACGTCTTCTCtccaaaaaagaaaatctgtgtcTGAGATATCTCCCCTGCCAATCTTAAAGCGAAAATCGCGCACACCTGCTTCTAGTTCTACCACAATAATAACTAGTAGCCCCTACAAGGATGACCTTGAAGAAAAACAACGTAAGAAAATGGCTCCTCCTAAAACCGCCAAAAaggttttttcttcttcaaaaccAGATTTCAAAGGCAAGTCTTCTGCGTCTAAATCATACAAGGGAAAGCGCCCTCTGCCACAGCATTCAACAAGCGAATCAGAATCCGAAGATGAAGATTGCCTTTGTATTATTTGTCTATCTCCATTTTCGTAA
Protein Sequence: MSQRGKYGKWVEENMREALIAHQSGVMGLNEIARKYQIPKATLKRRIDNKNKNAHGSEKKFGRAADIPPEIEEDIVNHVLQLERSLFGITRSDLRKLAYDVAEANGIPHRFKNGQAGKKWYYCFMSRHKELSLRQPEATSSARALGFSKEKVEAFFDCLTALYDEHNFSPSEIYNVDETGLSTVQRPQKIIGQKGKHQIGSLTSGERGVNTTCVCCINAAGMYVPPMLIFKRIRFKDELKEGAPPETEFACSESGWITSELFVKWLRHFINFAKPSKDKKVLLIMDGHTTHTKNLEAITLARESGIIMLSLPAHTTHRLQPCDVSFFKPLSSYYNQAADKWLRTHPNQNITQFQVSKLLGEAYAKAASVGNAVSGFAKCGIWPLDRNVFDDSEFVCLPNVNMDPTNASEDTSSANEVTHRALININNVTQHASTSTDTSVGGTLEAECSTSSLQKRKSVSEISPLPILKRKSRTPASSSTTIITSSPYKDDLEEKQRKKMAPPKTAKKVFSSSKPDFKGKSSASKSYKGKRPLPQHSTSESESEDEDCLCIICLSPFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01226705; iTF_01442342; iTF_01442341; iTF_01442348; iTF_01442366; iTF_01442337; iTF_01442338; iTF_01442339; iTF_01442340; iTF_01442311; iTF_01442375; iTF_01442344; iTF_01442315; iTF_01442318; iTF_01442319; iTF_01442320; iTF_01442321; iTF_01442385; iTF_01442290; iTF_01442322; iTF_01442323; iTF_01442324; iTF_01442325; iTF_01442326; iTF_01442358; iTF_01442327; iTF_01442328; iTF_01442329; iTF_01442330; iTF_01442331; iTF_01442332; iTF_01442333; iTF_01442334; iTF_01442335; iTF_01442336; iTF_01442193; iTF_01442199; iTF_01442301;
90% Identity: iTF_01442199;
80% Identity: iTF_01442326; iTF_01442327; iTF_01442328; iTF_01442329; iTF_01442330; iTF_01442331; iTF_01442332; iTF_01442333; iTF_01442334;