Telo000942.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:14336649-14336996[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-08 3.4e-06 29.0 0.0 5 37 1 33 1 39 0.93
Sequence Information
- Coding Sequence
- ATGGAGGCAGCTCTTCAATcaataaatgaaaaatatttgtcAACCAGAAAAGCAAGTCAGCAATTTAATATCCCAAAAACTTGCTTGCTTCGTCGGATTCATAATGTTGTGACCCACATCGGACCAAGAAATGATACTTACAAGCAAGTGTTTACTGCTGAACAATTAGTTGATCACATACTTGACTTAGAGACCAGATTCTACGGAATCATAACGATAGACTGCCGAAAATTAGCTTTCGATTTGGCAGAAAAGTTGAAATTAAAAcacattttcaataaaaaaacgAAATTAGCTGGTATCGATTGGTTAGCGGGCTTTAGGAAAATAAATCCAGAAATCTCCTGA
- Protein Sequence
- MEAALQSINEKYLSTRKASQQFNIPKTCLLRRIHNVVTHIGPRNDTYKQVFTAEQLVDHILDLETRFYGIITIDCRKLAFDLAEKLKLKHIFNKKTKLAGIDWLAGFRKINPEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01442289; iTF_01442132; iTF_01442057; iTF_01442186;
- 90% Identity
- -
- 80% Identity
- -