Telo028240.2
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023263.1:217083971-217084417[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 1.7e-06 30.0 0.0 2 41 10 49 9 51 0.93
Sequence Information
- Coding Sequence
- ATGTTCAGAAAGTTATTCCAGTATTCAGACGGTGCTATGCAGGATGCTTTGAGGGCAATAAGAGAAGAGAATATGCCTGTAGCTAGGGCCTGTAAATTGTTCAACGTTCCCAGAACATCAGTTCGAAATAGATTAGCAGGCAAAACCTCTGATGACTGTCGACGAGTTGGTCCTCAATGTGCTTTAGGTCCAGAGATAGAAAACAAACTGGTTACTTGGATCCTTGGCTGTGCTGCAAAGGGGTTTCCCATTAATAGAGAGGGCCTAATTTACTCAATTCACAAACTGTTACAAGAATGCTGTATCGATGTaaaattctttaaagaaacaCCAGGAAGAAAGTGGTTTGATTCCTTTTTGAGACGTCACCCCGAAGTAACTAAAAAGCACGCGGAATTTATCAATAAAGCTAGAGCTGCAGTTTCAGAAGGAAGTATACGTCGCTAG
- Protein Sequence
- MFRKLFQYSDGAMQDALRAIREENMPVARACKLFNVPRTSVRNRLAGKTSDDCRRVGPQCALGPEIENKLVTWILGCAAKGFPINREGLIYSIHKLLQECCIDVKFFKETPGRKWFDSFLRRHPEVTKKHAEFINKARAAVSEGSIRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01442404; iTF_01442234; iTF_01442478; iTF_01441925; iTF_01442502; iTF_01442476; iTF_01442477; iTF_01442425; iTF_01442142; iTF_01442166;
- 90% Identity
- iTF_01442234;
- 80% Identity
- -