Telo063529.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023267.1:119513561-119515095[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-10 1.9e-08 36.2 0.1 2 40 17 54 16 59 0.91
Sequence Information
- Coding Sequence
- ATGGTTTACAAATACAAAAGGAAGTCCGATAGAGCCACCAGTTGGTCTGAAGCAGATATGATAAGGGCTGTTGATGCCGTAAACAGCGGAATGTCGATTCGACGGGCATCCgcccaatttgaaataaaattttctactttGCAAAGACATGTAAAAAGTAATAGAACAGATAAAACCTTGGGAAGGTACAAACCAGTCTTTTCCATGCTAGAAGAAGCCGAGTTTGTGGAATATATAAAAGAGCTCGACAGCCGTTTTTATGGGCTAACGAGAAGGGATTTATGCGAACTAGCATACCAATatgctgaaaaaaataatatattgcacCCATTTCGAAATAACATGGCAGGGGAGCAATGGTATCAAAATTTCATGCACCGCCACTCTGAACTAAAACTACGCCAGCCGGAACCCACGAGTATAGCTAGAGCCCGAGGGTTCAATAGACCCCAGgtcgaattgttttttaaaaatttagaagctactataaataaatataaaataaccttGGATAACATCTATAACGTAGATGAGACAGGGATTCAAACCTCCGCCAAAAAACCACCAAAAGTGATATCATTAATCGGAAAAAAACAAGTCGCAAGCATCTCATCTGCAGAGCGAGGTAGTCTTATTACAGCATTAGTTTGTTGCTCTGCAACAGGAAAATACATCCCGCCCGCACTTGTCTTCCCCAGGAAGAAAAAAAATCCGCGATATTTAAATGGTTGCCCTCCAGGAACACTTCAGTTGGTGACAGATTCTGGTTGGATAAGTACAGACTCTTTTGTAGAATggctcgttttttttttgtacaaagcAGCTATCACAGTTTTGGATTATGCTTATGAAAATAACGTGGTCCTATTAACCGTACCGCCACACACCACACATAAATTGCAACCACTTGATGTAGCGGTTTATGGTCCATTTGGTAAACATTTTCAATATGCTATAGATAGGTGGCAGAAAGCTCACCCATCACAGCACGTAACTTTTTTTGACATAGGTGAAATATTTTGTGAGGCTTACTTAAAAGCTGCCACTCCTGCAAACGCAATCAGTGGGTTCAAAAAAACCGGCATATCAGACTGTGATATAGGCGTCTTCACAGATGTAGATTTTTTGCCCTCCCAAGTTACAGAGGTTGACGATTTTCTAGAggggcaaaataaaaatttagaaaatgacaGTGCATGTGCTAATACACCAATTAATTTGAATCTAAATGATGGAGAGATAGCCACAACATCTCGATTTGCTGGGGGTATCCAGGATAATTCTTCCACTTATTCCATTCAGAATATCGGTGACTCAGCTTCTAAACAGACTAATGATGATAATAGAGCCACAACATCTGGAATTGTGCAATGCGATCACAATGGCACAATGGCGATGAAAACGCATCATCAACCTCCGGCATCTCAAATCCCAATGAAGTTACGAGTGTTAAggagaagaaaaaaattcgaatag
- Protein Sequence
- MVYKYKRKSDRATSWSEADMIRAVDAVNSGMSIRRASAQFEIKFSTLQRHVKSNRTDKTLGRYKPVFSMLEEAEFVEYIKELDSRFYGLTRRDLCELAYQYAEKNNILHPFRNNMAGEQWYQNFMHRHSELKLRQPEPTSIARARGFNRPQVELFFKNLEATINKYKITLDNIYNVDETGIQTSAKKPPKVISLIGKKQVASISSAERGSLITALVCCSATGKYIPPALVFPRKKKNPRYLNGCPPGTLQLVTDSGWISTDSFVEWLVFFLYKAAITVLDYAYENNVVLLTVPPHTTHKLQPLDVAVYGPFGKHFQYAIDRWQKAHPSQHVTFFDIGEIFCEAYLKAATPANAISGFKKTGISDCDIGVFTDVDFLPSQVTEVDDFLEGQNKNLENDSACANTPINLNLNDGEIATTSRFAGGIQDNSSTYSIQNIGDSASKQTNDDNRATTSGIVQCDHNGTMAMKTHHQPPASQIPMKLRVLRRRKKFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01442086;
- 90% Identity
- iTF_01441937;
- 80% Identity
- -