Telo003902.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:77203900-77204532[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-11 6.8e-09 37.7 0.0 3 45 14 55 12 55 0.94
Sequence Information
- Coding Sequence
- ATGGAAAGGGCGAAAAAACCATTTTTTCGATATTCAGGAGAAAGTATGGAGGCGGCCATAACTGCCTGTCGCAGTGGTATGCCGTTTTCAACTGCTGCAAAACAGTTTGGGGTTCCGAGAAACACGCTAAAAAACAAAGTAAAAGGAAAAACGCCAGTGGAGCGCAGAATGGGTCCACCTGCAGTTTTATCCAAAAATGAAGAGAATGCACTTGTGCAATGGATAATTGAAATTTCAAATAGAGGGTTTTCGCCTCACAAAGATGATCTTCTGATAACcgtacagaaaattatgaaaaattcTAATCGACTAAATCCATTCATAAATGACAAACCCGGCAGGAAATGGTTAGCGGCGTTCTTCAAAAGAAACCCAACAATATCTGTCAGAGTACCTGAAACTGTGACCTCCACAAGAGCTTCAGTAACAGAAGAAATACTGAGAAACTGGTTTAAAGAAGTACTTACCTTCTTGGAATCTGAAAATCAAACCGACATTTTTAATTACCCAGAGCGCATATTCAACTCTGATGAATCTGCCTTTCAGATTTGCCCTAAGTCAAATAAGGTTATTGGTCCGCGaggcgaaaaaaatatatatgaaatagcAAAGGGCTCAAAAGGGCTCAGATAA
- Protein Sequence
- MERAKKPFFRYSGESMEAAITACRSGMPFSTAAKQFGVPRNTLKNKVKGKTPVERRMGPPAVLSKNEENALVQWIIEISNRGFSPHKDDLLITVQKIMKNSNRLNPFINDKPGRKWLAAFFKRNPTISVRVPETVTSTRASVTEEILRNWFKEVLTFLESENQTDIFNYPERIFNSDESAFQICPKSNKVIGPRGEKNIYEIAKGSKGLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01442091; iTF_01441942; iTF_01441914;
- 90% Identity
- iTF_01442091;
- 80% Identity
- -