Telo029592.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023263.1:246051147-246052062[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-07 0.0001 24.3 0.0 3 42 17 56 16 59 0.91 2 2 8.3e-08 1e-05 27.5 0.0 3 42 161 200 160 203 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGGGCATATAAACGAGAAACTACCACAGCTTCTTGGGCTTCGGAGACGCTTCAGGCAGCTCTGGCAGCAATAGAAAATGGGACTCCTGTTCGGGAAGTTTCAAGAAGTTTTGACATTCCAAAAGCAACTCTTCAAGATCGACCAAAAGACGGCCGAGGATCTAAGCCTCAATTGGGACGACGGCCAGTATTTACTAAAGAACAGGAGCGGGAATTATCGGAGCAAATAATTACTCTTGCCAAACTCTTTTTAGGAATTACATCGGCACATGTTCATCAAAGCGCCTACACCTTTGCCAAATCCAATACTTTGGAAAATCTGTTTAAGGAGGAAAAAGGGTCAGCGGGCTGTGACTGGTTAGAGGGATTATTACGACGCAATCCACAAATGACACTAAGGAAACCGGAATCAACCAGCGTAAATCGTATGCCGCGTGCCTATAAACGAAAAACTACCAGAGCTTATTGGGCTTCGGACACGCTTCAGGCAGCTCTGGCAGCAATAGAAAATGGACGTTCTGTTCGGGAAGTTTCAAGAAGTTTTGACATTCCAAGAGCGACTCTTCAAGGTCGACGTAGAGACGGCCGAGTATCTAAGCCTCAATTGAGACGACGCCCAGTATTTACTAAAGAACAGGAGCGGGAATTATCGGAGCAAATATCTACTCTTGCCAAACTCTTTTTTGGTATTACAGCGGCACATGTTCAGCAAAGCGCCTACACTTTGGCCAAATCCAATACTTTGGAAAATCTGTTTAAGGAGGAAAAAGGCTCAGCGGGTCGTAATTGGTTAGAGGGATTATTACGACGCAATCTATAA
- Protein Sequence
- MPRAYKRETTTASWASETLQAALAAIENGTPVREVSRSFDIPKATLQDRPKDGRGSKPQLGRRPVFTKEQERELSEQIITLAKLFLGITSAHVHQSAYTFAKSNTLENLFKEEKGSAGCDWLEGLLRRNPQMTLRKPESTSVNRMPRAYKRKTTRAYWASDTLQAALAAIENGRSVREVSRSFDIPRATLQGRRRDGRVSKPQLRRRPVFTKEQERELSEQISTLAKLFFGITAAHVQQSAYTLAKSNTLENLFKEEKGSAGRNWLEGLLRRNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -