Telo018355.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023263.1:26808122-26827659[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.4e-11 1.2e-08 36.9 0.0 1 39 313 352 313 356 0.90 2 4 1.4e-11 1.8e-09 39.5 0.1 1 39 367 405 367 408 0.95 3 4 3.9e-17 4.7e-15 57.4 0.0 1 45 422 467 422 467 0.98 4 4 5.3e-15 6.5e-13 50.5 0.0 1 39 474 513 474 517 0.94
Sequence Information
- Coding Sequence
- ATGAAATCAGAATTTCCATTTACATCTATCTCTTGTTATCGCTACTTTGTTGTACATGATCCTAATGCGAAATCACTTCTGAGAACAGCAGATCAGCTGAAAATCAAGGGGCTCTGCGAATCAACCGATGACAAAGACAACACATCAAACATACTACCATTTTTAAATAAGGGTTACTCGAAGATCAGAAGATCGGCCTCGCCTAAACAATTTATACCTCAAGGAGCGACAGACAATAATAGAAAACTCAAATACAGAAAGCTAAATAACAGTGAGAATACACCAGAAAGAGAACCAGAGCGTATCAACGACATCAGAGGAGCTGCAGCGCCTTCTTCCGACGAAGAAAATGAAATGCCAGTAGCTCTGGATGAACACAAGAGGAAAATACCCGTACCTGAACAAACCACACCACTCAACATGAGCAGTCATGGCATCGTTTCTGGACAGACGATCTTCTCTCAGTTTGGAGTGGACACAGATGACTTTCCACCCGAACCACCCGCCCCTTCTGCCATACCTGTCGGCCATGTGGATATGCAAGAACACTCACCAACCAGAACCCTCCTTACAAATAGCTCCATACACCGGACAGATCTTTCAGACTCAAATAGCATTAAGTTTAGTGAGATTAAAAAGGAATCGGATATTAAATTTGAAACGTTGCGATCCTACGATCAGGACTCTCTCTTAGAAATGGATTCGCATATGTCAGGTCCAGATCATTCCATGGACAGTCATGAGGATATTACTGAACATGGAATGCACTCTATGATGGTCACTCCTGAACTCATGGGAATGTTACCTGGTGTTTCTTCCAATAGATTAGATATGAATAATGGTAGTAATGGTGAATCATTAAATATGAAAAGCAATGGACATTCAGAGATTATATCTCATCATACCTCAAGGACAGGCGGTGGTCCGAAGACCTGGACACAAGAAGATATGGACCTGGCTTTAGATGCCTTAAGAAATCACAACATGAGTCTGACAAAGGCCTCTGCAACTTATGGTATTCCCTCCACTACGTTATGGCAAAGAGCACATAGGTTAGGTATTGATACACCAAAGAAAGAAGGACCTACAAAGTCCTGGACTGAAGAAAATCTAAACAGTGCTCTGGAAGCACTTAGGACTGGTACTATTTCTGCAAATAAGGCTAGTAAGGCTTATGGTATCCCTAGCAGTACATTATATAAGATAGCAAGAAGAGAAGGTATAAGACTAGCAGCACCGTTCAATGCAGCCCCAACCACTTGGACCCCCGAGGATTTAGAGAAAGCACTGGAATCAATAAGGACTGGTCAAACATCGGTACAAAAAGCTTCAACGGAATTTGGTATACCAACTGGTACACTTTATGGTAGGTGTAAGAGAGAAGGGATAGAGTTGTCCAGATCTAATCCTACCCCTTGGTCAGAGGATGCCATGGGAGAAGCACTTGAGGCTGTTAGGTTGGGTCACATGTCTATAAACCAAGCTGCCATACATTACAACTTGCCTTATTCCTCTCTTTACGGCAGATTTAAACGAGGTATTAAATATGACACTGAGAGCCTAGACGGTAACTCAGACAGTCAGTCTCATTTGGATCACGCTTTTGCCATGGATTATGCTAATCATCACCAACAACAACAGCAACAACAACAGCAGATACAGTACCAAAATCAGACGAACAGCTGA
- Protein Sequence
- MKSEFPFTSISCYRYFVVHDPNAKSLLRTADQLKIKGLCESTDDKDNTSNILPFLNKGYSKIRRSASPKQFIPQGATDNNRKLKYRKLNNSENTPEREPERINDIRGAAAPSSDEENEMPVALDEHKRKIPVPEQTTPLNMSSHGIVSGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMQEHSPTRTLLTNSSIHRTDLSDSNSIKFSEIKKESDIKFETLRSYDQDSLLEMDSHMSGPDHSMDSHEDITEHGMHSMMVTPELMGMLPGVSSNRLDMNNGSNGESLNMKSNGHSEIISHHTSRTGGGPKTWTQEDMDLALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDTESLDGNSDSQSHLDHAFAMDYANHHQQQQQQQQQIQYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -