Basic Information

Gene Symbol
ARID5B
Assembly
GCA_964006375.1
Location
OZ023262.1:256924613-256958185[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-26 2.8e-22 81.2 0.1 1 89 994 1080 994 1080 0.94

Sequence Information

Coding Sequence
ATGACTGACGGAGAAAGTATAACCAACAAACAAATTTATGACACATTACAACAGATGAAAATAGACTTTAGGGCCCATGTGGATGAGCTCAAAGAATCATTTACAAATAAACTAATTGTTGCTGGTCAAGAAATAGAAAATCTTAAAAGGGAGAATGATATATTAAATAGAAGATTGGAGACGCTGGAAAAAAGAATAAAGAAGAATAATATCATTATCTTCGGAATAAAATGTGTGGAATATAACAAAGAGGAGCTAACTACTTTTGTTATAAGGAAAATTGAGGCTTTGTTGGATATTGCCATTAACACGGCTTTAGTAAGCGATGTATACTCCATAGGTAAAAGTCAAATAAGCAAGCCTGTCATTATTGAGTTCGTCTCTCCCCGAGAGAAATCCAAGATCCTTAATAACGTAAGAAAACTAAAAGGTACTCAAATATTCATTCAGCAAGACCTTACACGGCAGGAACAACTAGAGAGCAAAGTCCTGAGGAAACAGCTCAAGTCCGCTAGAGAGAATAAGCTTAATGCATACATAAGGAATGGCAAGTTGATGGTAGATGGAGAGGAGTACAAACCAGATGAACTGAATTACACCACTGCCCCTTCCCAAGAAGATAAGAGAGCTGAGATCAGCGAAACACCAAATAGTACACCTGGAACACCAACACTGGGGGAGTTTGGCCTGGAGTCTGCAATCAACATTGCGAAGCAGAGCGGTACACCTTCAGTGGGGCCACTATCAGCATCTCAAAAACATCCAGCGACTGCAGCTGATAAAAAGATTTTGCAAGGTCACGCAAGTCAACAAGGTCATTCAGGTTCGGGAACTGCCACACTGGTTGCCAAAATCGACACTTTAAGGAGGAGAGGTGACGAAATTAGGAGGAAATGTGTGGCAATTAACGCCATATACCGGTCCCCAACTTCATCCGAATATTCCTTTAACGACGCACTATCAGAGTATCTAGTTAGACATGCAAGGGGTTCTGACATGGAGGTCCTTTTAGGAGACATAAACATAGATATATTAAGCAGCGAACACTTTACTagtgattacctaaatattttgtCCGGTGAGGGGTTTGTTTCGGTGATCAATAAGCCAACCAGAGTCTTTCGAGACAGTAAAACCTGCCTAGACCACATTTTTTTGAGAGCAAGTACTGCTGTGAATTTGTGCCCTATTGTTCTGAAAACTTGCATTACTGACCATTATAGTACCATCCTCCAAATAGGACTCCCACATGAAATAAAGCATAGAGACCTAGATGATACAAATGAGAATGTGGATAAATACAGACACATTTTAGAtatgaaattatttaagaaaaaagttagTGAGGAAACTTGGGAGGCTGTATATGGTTTCACTGATGCAAACAGGGCTGCTGCTTTGTTTGTCAATATGGTTAAGAAATACATAAACGTAAGCACTAAAGTGGTAAAATTGAAGTacaaccaaagaagaagaaaagactGGATCACCCAGGGTTTAATTAATGCAGTAAATAAAAAGAACCAGTTATATAAAGATAAACTGAGACGGCCACATGATGGAAATATTGCTGAAGAATTTAGAGTCTATAGAAACAGGTTGCATGACATAATTGATAGGGCAAAGACTGACTACTATAAAAAACAGATTGAAGGATGCCGGCTTCAACCCGCTAAAATGTGGACTTCTATTAATAACCTGAGGGGGAAAACCCGAAATCGTAgctcaataaaacaaataaaaagcgaGTCTGGAGAAATGCTAGTTAATCCGCTGGACATAGCGGATagattcaataattatttcagcAGTTTAGGGGAACGACTGGCAAACGGGTTACCGGCTACAGCGGCGACTGCTGGTGGGACCCACATTGCTAACACGATTTTTTTGTCTCCGACCGATGAAAATGAGGTGGGGAGTGTTATTGGATCCCTGGCTAGCCCCAGGAGCGCGGGAGAAGACggtataaaaccagaacacattaAAGAAGTAAGGCAATATATTAGTGGTCCTCTAGCGTATATAATAAATAGGTCCTTGAGTGAGGGAGTGTTTCCAGATGTCTTCAAGAATGCTCTTGTCATACCAGTCTACAAGTCTGGAAGTCAAATAGATGTTTGCAATTACAGGCCGATATCTTTGATTAGTGTTTTGGCAAAGGTTTTTGAGCATATATTAAAGACGAGAATAActgattatctcaaaaaatacaacatATTGTCTGATAAACAGTTTGGTTTCCGAGAGTCTAGGTCGGCGGAAGATGCGATGATTAAATTGATCTCAAATGCTTATGAAAGCCTAGATAATGGACTATCGTCCATGTGTGTGATTTTTGACCTGGCTAAGGCCTTCGACACGGTAAACCATGATAAGTTGCTATTACTACTGAGTGACATAGGCTTCAGAGGAACCCCGTATAATCTAATAAAGGATTACCTATCCAACAGACAACAGACGTTTAGAATTGGTTGTTGCTTATGTGAAAGATCGGTTGACGGGCTCGATCAGTTTAGAGGTGATTGCAATGAGTGTAGATGGGTAAATTCAGATAAAGAGAAGGTAGGCAGCGGCCCCTCAGTGGTGATCCTGAGTTACCCCAGGTACTGTCGATACCGAGCCATGATGAAACGTTTGGAAGGTGTCGAGAGCGAGTACCTGAAGCTTAGGATAGTGAACGCTCTAGGGGGTTTCACAGTCCTGGCACGAAACACAAGGGTTCTTTTCTGCAGAGACACATTCGATTATCCTGAACTGGAAGGCCATGAGCTATTATGTAACCACTTAGCTCCCAAACTTAAAGGAAGACCTCGGGGCAAACGGAAAAAGCGCAGTGTATCACCTGGATCAGAGAGCAACGAGTCTGAGTCGTCTGTTACTACTGCCTATATTCCGGCAAAGACTAAAATAATTGATATTGACCAACCGAGCACTTCAACAGGAAGACGCAGTACACGCTTAACAGAAATGTATAATGAAAATAAAGAGTTTATGAAGAAATTGCACACATTCATGAAAGCTAATCGTACACCAATAGGACGTGTACCGTCCCTTGGATATAAAGAAATTGATCTATATGGTTTCTACACGAAAGTTCAAAAATTGGGTGGCTATAATGCTGTCACACGGCATCGACTATGGAAGTCAATATTCGATGAGATGAGCGGTCACCAAAACAGCACAAGTGCAGCGACTGTTATTAGAAGGCATTATGAAAGgtTATTACTACCATATGAACGTCACCTCAAAGGTGAGGAATACAAACCATTACCTGTAGCTGAACGAAGAAGACTGAAAAGCAAGGCAAATAGTAGTATTAGTGACAATGAGAACAGTGAGAGTACGTCTGGCAATAATAGCGGAAACAGTACCCCAATACCACAAGCAGCTACTTCAACCCCGGGTACAAGCAGTAGCAGTACTGCTGAAACTAAGctGTCTGGAGCTATCCCCAAGCCAGGAGTGAAAACATCGTCATTAAGAAGCATTCGTGTGAAACCTGACAGACAAAAAGACAAACAAATAAGCAATGAACAGtgcaataacaataataacaaaagtGATGTgaagaacaatgtaaacataaAAAGTGACTTTAAAGAAATTGACATTACAATTATCACACAAGGTAATAATAAAGATGGAGGAAAACTTAAAGCAGAACAAGATTCAAAACCTGGTATTGCATCTGCACAAGTTGAAATTATACCTGTAAAAACAGAAATTACTCATGGAGAAAGTGAAACGGGTGATAAAAATGATGTAAGCATCGTGAAAACTGAAGCTCAACATTTGGAGGTTGAAATTTCATTACAGTCAAATGAAAATAAACCAGTTAAAGAAGTTGAGCCTAGTGGAACGGAAATAATACCGATTAAAACTGAAATACCAATCAAAATAGAAGTGTTCGAAAGTAAAACGGAAATAACTCCTATTAAGAGTGAATTTCCGCTTATTAAAACTGAGATAATTCCAGTAAAGCCTGATATCATACCTAAAAAGGTTGAAATTATGAAGTTGGAAACAGTACCTATTAAAATGGAGAAAAATATTGAACCCTTAACTTCAGCTGTTGCTCCTGTTGCACAGAAAATAAGTCCTGAAAAATCTCTTTCTCCAGTTGAGGGTAAAGAAAATATACCAATCATCAAGACAGGTGATACAGCTAGTACAAATAGTAAAAATCCTGAAGTCGTCGAAGTGCCATacaaacccaaatcaccagatgTTAATGTTGAATCAAATGCATACAAAAGCATAAGCAACTTTACAAATGAATTCAAGAAACGCAAACTGGATATACTGAAAGAAGGTGGTCTAGAAGTTACTCCAGTGCGGTCATTTATTGCACCATCTATTGGTAAAGATATTAGACCTTCTGTAATACATCAAGCTGCAACATCACCCCAAATTTCTGCCAAAATTATCAAGAGTGATATGCAGTCCATGCCACCTCCTTCAATAAATACAGTACCTTTGAGACGGATACCAATTTCAGTCCCACAGGCACTAAATATCAGTCCTGTGTCTGTTACTAACAGTGTTCCGAAAATGTTTAATAAGCCGCAAATTAATTCTAATAGTGAATCACCCCACATAAATGGTTACTTTCCACCTAAAGTCCTCCAGTCAAAATCAATTTATTCATATTCTGAGAAGACCATCTATGGGAACCCCAGAGAAGCCCTGATGCCGTCGATAGTTCCTGTACATACTCCGAAATTCCACGGTGCAGACCCACGCAGTTCAGGTGGTGACATCTTGGATCTTACAGTTTCCAGTCCTCAAAAGCCTATTGTGGAAATCATGCGAGTTCCAAATGTTTCTGTGGCATCACAGCCGTTCAGTTACCGCGACCAATCTTCTAGAAATAGTGTATACAAGTCAACACCTTCGTTAATAGATGGTAGAAGGTTAGGTTCTAACCTAGAAATAACTCTAGTGGGATCAACTAACAAAACGGCCACCATTCCAACTTCCCCAATCAAAGCTAATGTTCCACCGCCAATGATGAACACATCAAGTAGATACTCACAAAAACGTTCACTTACAGACAATTATATGGGTAGTAACAAAATTCCCAGAATAGATGAGAACGGCAGATATGGTAGACCAAGTTCTTCGTCCAATATGAATTCTTTACATTCACCTAGAGATAAAAGTAACATTGAAATTAGCATTCCTAATCCATTTAAGCATCCGAACGTTAAACCTGAATCGACTACCCAAATGAAACCACCAGTAGCTAATCCAGGGTTAAGTTCGAAAATGTTTGCAAACAACCCACAACTTCCTCCGTATTTGTCGCAGTTATATGAGACTAATAAAAACATAAATCCGTACCTGCCTTTCTTAGATCCAGCATTATATTACCAGGCAGCTATACAAAATTTGTATGCACAAAATAGTCTGTCTACATCTCATCTTATGCCGTTCCTGAATCAAGAACAATTGAAGCTTTACACAGATCTCATGACACATAGTGCCCGAATGCCCTCTTTTCCGTTTCCCCAACAAGATGCAAGTCCGCCAActattaatagtaataataatttcaaaaagCCATAA
Protein Sequence
MTDGESITNKQIYDTLQQMKIDFRAHVDELKESFTNKLIVAGQEIENLKRENDILNRRLETLEKRIKKNNIIIFGIKCVEYNKEELTTFVIRKIEALLDIAINTALVSDVYSIGKSQISKPVIIEFVSPREKSKILNNVRKLKGTQIFIQQDLTRQEQLESKVLRKQLKSARENKLNAYIRNGKLMVDGEEYKPDELNYTTAPSQEDKRAEISETPNSTPGTPTLGEFGLESAINIAKQSGTPSVGPLSASQKHPATAADKKILQGHASQQGHSGSGTATLVAKIDTLRRRGDEIRRKCVAINAIYRSPTSSEYSFNDALSEYLVRHARGSDMEVLLGDINIDILSSEHFTSDYLNILSGEGFVSVINKPTRVFRDSKTCLDHIFLRASTAVNLCPIVLKTCITDHYSTILQIGLPHEIKHRDLDDTNENVDKYRHILDMKLFKKKVSEETWEAVYGFTDANRAAALFVNMVKKYINVSTKVVKLKYNQRRRKDWITQGLINAVNKKNQLYKDKLRRPHDGNIAEEFRVYRNRLHDIIDRAKTDYYKKQIEGCRLQPAKMWTSINNLRGKTRNRSSIKQIKSESGEMLVNPLDIADRFNNYFSSLGERLANGLPATAATAGGTHIANTIFLSPTDENEVGSVIGSLASPRSAGEDGIKPEHIKEVRQYISGPLAYIINRSLSEGVFPDVFKNALVIPVYKSGSQIDVCNYRPISLISVLAKVFEHILKTRITDYLKKYNILSDKQFGFRESRSAEDAMIKLISNAYESLDNGLSSMCVIFDLAKAFDTVNHDKLLLLLSDIGFRGTPYNLIKDYLSNRQQTFRIGCCLCERSVDGLDQFRGDCNECRWVNSDKEKVGSGPSVVILSYPRYCRYRAMMKRLEGVESEYLKLRIVNALGGFTVLARNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVTTAYIPAKTKIIDIDQPSTSTGRRSTRLTEMYNENKEFMKKLHTFMKANRTPIGRVPSLGYKEIDLYGFYTKVQKLGGYNAVTRHRLWKSIFDEMSGHQNSTSAATVIRRHYERLLLPYERHLKGEEYKPLPVAERRRLKSKANSSISDNENSESTSGNNSGNSTPIPQAATSTPGTSSSSTAETKLSGAIPKPGVKTSSLRSIRVKPDRQKDKQISNEQCNNNNNKSDVKNNVNIKSDFKEIDITIITQGNNKDGGKLKAEQDSKPGIASAQVEIIPVKTEITHGESETGDKNDVSIVKTEAQHLEVEISLQSNENKPVKEVEPSGTEIIPIKTEIPIKIEVFESKTEITPIKSEFPLIKTEIIPVKPDIIPKKVEIMKLETVPIKMEKNIEPLTSAVAPVAQKISPEKSLSPVEGKENIPIIKTGDTASTNSKNPEVVEVPYKPKSPDVNVESNAYKSISNFTNEFKKRKLDILKEGGLEVTPVRSFIAPSIGKDIRPSVIHQAATSPQISAKIIKSDMQSMPPPSINTVPLRRIPISVPQALNISPVSVTNSVPKMFNKPQINSNSESPHINGYFPPKVLQSKSIYSYSEKTIYGNPREALMPSIVPVHTPKFHGADPRSSGGDILDLTVSSPQKPIVEIMRVPNVSVASQPFSYRDQSSRNSVYKSTPSLIDGRRLGSNLEITLVGSTNKTATIPTSPIKANVPPPMMNTSSRYSQKRSLTDNYMGSNKIPRIDENGRYGRPSSSSNMNSLHSPRDKSNIEISIPNPFKHPNVKPESTTQMKPPVANPGLSSKMFANNPQLPPYLSQLYETNKNINPYLPFLDPALYYQAAIQNLYAQNSLSTSHLMPFLNQEQLKLYTDLMTHSARMPSFPFPQQDASPPTINSNNNFKKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-