Basic Information

Gene Symbol
osa_1
Assembly
GCA_964006375.1
Location
OZ023269.1:24463342-24489171[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-27 6.8e-23 83.2 0.0 2 89 200 284 199 284 0.95

Sequence Information

Coding Sequence
ATGCAAGCGGACCCTATTAATCCAAGAGTATGTGGTAGGATAAGTCGGAATGGGAGAACTGACTTAGTAACCTGGATGAAAGAAAGCATTAATGCAGAAAAGTATCGAAATTTGTGTGAGAGAGGCATTGTCATCCCCTATGACATTAATTTTGCTAACGATTTTCTCTTGGTCGATGATAATGCTGGTCCTTGTCGAGCAGAAGTTGTTACGGATATGCTTCGGGTAAACAATATAGAGATAATGGAGTGGCCTGCCAGGTCACCTGATATAAATTTGATTGAACATGTATGGAGGTGGATCAAATTGAGATTAACCTCGGGTGAGGATCCACAGTGTACAACGCCAAAGTCTGGTAGGAAGAACGACATGAGTGGTCATTATAGTCATCCTACTACACCTCAAAGCACTGTACCATCTCCCGGAGCAGCTAGTATGAACTCGATGCATGAAGAGTATGGTGAAATGAGCAGTCCAAGTTGGCCTAGGACACCTGCTAGTCCAGTTTTTAACAGTCATGTGCCTCCACAGGACACCTACCGCTCAAAGAAAACTGATAGTCTGGGAAAACTGTATGAGATGGACGATAGTCCTGATCGGAGAGCTTGGCTAGATAAATTATTGGCTTTTATGGAAGAAAGAAGGACGCCAATCACTACTTGCCCTACTATATCAAAAAATCCACTTGATTTGTTTCGCCTGTATGTCTATGTAAAAGAACGGGGTGGCTTTATGGAGGTGACGAAGAATAAAACTTGGAAAGACATAGCAGGAATGTTGGGAATTGGGGCATCATCTAGCGCTGCATATACGTTGAGGAAACACTACACCAAAAATTTATTAGCTTACGAATGTCAATATGATAGAGGAGGAATTGATCCTCAACCCATCATAAACCAGGTTGAGGCTAGCTCAAAGAAGAAGGGAGCTAAAGCTGCGTCCGTACCATCACCAGGCTCATCAAATTCCCAAGATTCCTTTCCTCCACCAGGTTCTGGTGGAGCTTCTATGGATGGTTATGGAGGGTATGGCTATCCCCCTACTGGAAATCCGGAGTATAACACTTCACAACGACCATCTTCTCAAGGAAATGCACCTTCACCTCATGGTGGTACAGGAGGGGCTAATCATTTAAACAGTGCAGCCCCTGGGGGTCCCAGCCCTGCAGGCGGGGCTGCCGACAACGTTAGCGTATCAAACCCTTTTGATGATGTTTCCCCCAGTCCGCCACCTCGAGGGGGGCCATTTCCAGGTGGAGCTCATCCCCCTTATCCGGGTGGCACGCCTCCGCGCTCTCAGGGCCAGTCTTACGGGGGCGGCGGCCAGCCGGGGTACAATCAATATCCTGGGGGACCAGGAGGGCCGGGGCCCGGACCTGGACCTGCCTCTGGCCCTGGCCCAGTGTCCGGCCACTCCGGCCCGCCGGATCAGTACTCCCCGTACTCGGCTAACTCCGGCTATCCGCCAGCCGTTAGACCAGTCTATCCTCCATATTCAGGTGACTCCGGGGCGCCCCCTGTGCCTGCACCCGGTCCCCCTGGACCGACTACATCTCAAGGCCCACCTTCTACCACTTCAGACCCTTACACACGCTATACCATGGGCTCCACTCCGGGAACAGGCTACACTCCAAGGCCAGCCTACGGAAATGCTCCAGGAAACTCAGGACCACCGCCTACCCAGCAACCAAATGCACCATATCCATCTCAGGAATACTACAGGCCCGAACAGAGCTATTCTGGGCCTCAAAGTACATCTACAACGCCAGCTTATGGAGGACCTTCTCCAAATAAGAACATGCCTCCACCTGGACCGCAACCTCCAAGGAGACACCCGGACTTTGCAAAAGAGCAACAGCAACCTTATCCACCTTATAGTCCTAGACCACCACCACAGATGTATAGTTGGTCAAATAACAACCAGTACAGACCACCACAGTATGCTAACACTGGTTCACCACAAGTTGCATCACAATCCTGGACTCAGGGAGGTAGACCTGCTGGTGCCCAGTGGGATCATCGTTACCCAGGAAGTAACCAAGCTTACCAATCTCCTCAACAAGCACAACCTCAGTGGTCTTCTATCTCAGCCCCAGGAGTTGGACAGAGCTCCCCCTTGAGGCCACCCATCGGACCTCGTCCTGGCAAGCCTTTCCAAATGATGCAACAACAAGGTAGCAAGACTGCTCAGCCCCAGACAGCTGTTCCCAGCTCTTACTCCCAGAACCAGTTGCCAAAGCGAGAAATTACCTTTCCTCCAGACAGTGTGGAAGCAACATTGCCTGTATTGTACAGGCGCAAAAGGTTAACTAGGGCAGACCTGAATCAAGTGGATGCTTGGCGTATAATAATGTGCCTGAGATCGGGACTCTTGGCTGAAAGCACATATGCACTTGACGTGCTCAATATTCTGTTATTTGATGATTCATCGGTGGCATACTTTGGCTTGAACCAGTGGCCAGGACTGTTGGACTTGCTGCTAGAGCATTTTAGAAAAAGCTTGACAGATATGTTTGACAAGCCACCCGTTTCACAAGAAGGTGAATCTGAAGATAAAGAAATAGACCTGGGTGGTGTGACTTCGCCAATTGATCCAAATGCTAAGACGGTGCTTTTGAACAATACGACAAATTACTCTTTTCAAACTCGGAAAGGACATCCAGTGAAGGTGGTGGAGAGAAACGAAGATATTTTCATCAGGGATAATCTAAAGGACTGGGATGTCCGTGGTGATGCGAACAATGCAAATATAGCTGCAGCTATACCAACAGATCCTTGGCATCATGATGCAGAACACATACTACCAACATTTCAGGCAGAATTCTGCCGCATTCCCTTCAACATGAGGTTGACGGAAACAAACCAACCTAAAGCTGAAAGCACTACGACTACAGCAGAACCAGACAGGCAGCGAACGCCACCACCTGACGAAGCACCTCCTCCTGCTAAAAGTAGTGATAAAAAACGTAGGACAAAGACATTAAGTGATGTGATATCTCGAATTAAAAAGGACTCTTTTGAAATGAACGATGTGCTCACTTTGGATAACATGAAGACTGATGTAGTGAGTGAAAAAGCGAACTGTGAAGAGCAGACTAGTATAGATCTGAACGTGAGTGTGAACGGGGAGTGCGGGGAAAATAAAGAAGAACCACAAGTGCGTGATACCGTTGGAAGGTTAAAACGACGAAGGTTATCCGACTACGAAGATGAAGCTTACACTAGAGATGAAGCTAGCCTATACCTGATTACCGAGACCCAGGAGAACATAGGTAAACGCTGTGTCTGCATATCCAACATTCTTAGAAGCCTTACTTTTGTGCCCGGCAATGAGAGCGAATTTGCACGTAACTCGGCATTCTTAGCTCTTGTAGGAAAACTTCTGCTGCTGCATCATGAACATCCACCTCGGACACAGAAGACACGTAATTATGACAGAGAGGAGGATGCAGACTTTGCAGATTCTTGCAGCAGCTTACAAGGGGAATCAGAATGGTGGTGGGATTATCTAACAAACATCCGAGAGAACATTCTGGTATCAATATCAAACATAGCTGGTCAGATTGATGTTTCGCTGTACGATGAGGATATTGCGAGGCCGTTGCTAGATGGTCTGCTTCACTGGGCTATCTGCCCTTCAGCTGCAGGACAAGATCCATTTGCCTCAGCAGGACCATCGTCACTGCTGTCTCCACAACGCTTGGCACTGGAAGCATTGTGTAAACTGTGTGTGACGAACAGCAACGTAGACTTGGTGATAGCAACACCCCCATTCTCCAGGTTGGAAAGGCTCTGTGCAGTATTGACGAAACATCTGTGTAGGTCGGAAGATCAAGTACTGCGCGAGTTCTCGATCAACCTGCTACATTATCTGGCAGCGGCAGACAGCAGCATGGCACGAGTGGTAGCGGCACAGACACCCTGTGTGTCGCTTCTCGTGGCTTTTATCGAGCAGGCGGAGCAGAGCGCCCTGGGTGTAGCTAACCAACATGGAATCAGCGCCTTACGAGACAACCCGGACTCCATGGGAACCAGTCTAGATATGCTAAGGCGAGCTGCTGCAACGTTGGTTTTTCTGGCACGCCATCCGGACAACAAAGCCCTGCTGGTGCAGCAAGAGTCGCGTTTGCTTGCACTAGTGATGAGTCAGATTCTGGATCAACAAGTAGCGTTGCTGCTCTCCAAAGTGCTGTACCAGATTTCTAACAGCTAA
Protein Sequence
MQADPINPRVCGRISRNGRTDLVTWMKESINAEKYRNLCERGIVIPYDINFANDFLLVDDNAGPCRAEVVTDMLRVNNIEIMEWPARSPDINLIEHVWRWIKLRLTSGEDPQCTTPKSGRKNDMSGHYSHPTTPQSTVPSPGAASMNSMHEEYGEMSSPSWPRTPASPVFNSHVPPQDTYRSKKTDSLGKLYEMDDSPDRRAWLDKLLAFMEERRTPITTCPTISKNPLDLFRLYVYVKERGGFMEVTKNKTWKDIAGMLGIGASSSAAYTLRKHYTKNLLAYECQYDRGGIDPQPIINQVEASSKKKGAKAASVPSPGSSNSQDSFPPPGSGGASMDGYGGYGYPPTGNPEYNTSQRPSSQGNAPSPHGGTGGANHLNSAAPGGPSPAGGAADNVSVSNPFDDVSPSPPPRGGPFPGGAHPPYPGGTPPRSQGQSYGGGGQPGYNQYPGGPGGPGPGPGPASGPGPVSGHSGPPDQYSPYSANSGYPPAVRPVYPPYSGDSGAPPVPAPGPPGPTTSQGPPSTTSDPYTRYTMGSTPGTGYTPRPAYGNAPGNSGPPPTQQPNAPYPSQEYYRPEQSYSGPQSTSTTPAYGGPSPNKNMPPPGPQPPRRHPDFAKEQQQPYPPYSPRPPPQMYSWSNNNQYRPPQYANTGSPQVASQSWTQGGRPAGAQWDHRYPGSNQAYQSPQQAQPQWSSISAPGVGQSSPLRPPIGPRPGKPFQMMQQQGSKTAQPQTAVPSSYSQNQLPKREITFPPDSVEATLPVLYRRKRLTRADLNQVDAWRIIMCLRSGLLAESTYALDVLNILLFDDSSVAYFGLNQWPGLLDLLLEHFRKSLTDMFDKPPVSQEGESEDKEIDLGGVTSPIDPNAKTVLLNNTTNYSFQTRKGHPVKVVERNEDIFIRDNLKDWDVRGDANNANIAAAIPTDPWHHDAEHILPTFQAEFCRIPFNMRLTETNQPKAESTTTTAEPDRQRTPPPDEAPPPAKSSDKKRRTKTLSDVISRIKKDSFEMNDVLTLDNMKTDVVSEKANCEEQTSIDLNVSVNGECGENKEEPQVRDTVGRLKRRRLSDYEDEAYTRDEASLYLITETQENIGKRCVCISNILRSLTFVPGNESEFARNSAFLALVGKLLLLHHEHPPRTQKTRNYDREEDADFADSCSSLQGESEWWWDYLTNIRENILVSISNIAGQIDVSLYDEDIARPLLDGLLHWAICPSAAGQDPFASAGPSSLLSPQRLALEALCKLCVTNSNVDLVIATPPFSRLERLCAVLTKHLCRSEDQVLREFSINLLHYLAAADSSMARVVAAQTPCVSLLVAFIEQAEQSALGVANQHGISALRDNPDSMGTSLDMLRRAAATLVFLARHPDNKALLVQQESRLLALVMSQILDQQVALLLSKVLYQISNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-