Basic Information

Insect: Tiliacea citrago
Gene Symbol: -
Assembly: GCA_963921375.1
Location: OY992807.1:14281947-14283974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00044 0.066 15.1 0.8 2 23 318 340 317 340 0.94

2 9 0.19 28 6.8 1.5 1 23 346 368 346 368 0.98

3 9 0.0015 0.22 13.5 0.1 1 21 402 422 402 423 0.93

4 9 0.00069 0.1 14.5 1.7 2 23 441 462 440 462 0.97

5 9 2.5e-05 0.0036 19.1 1.4 2 23 470 491 470 491 0.97

6 9 0.00078 0.12 14.4 2.7 1 23 497 519 497 519 0.96

7 9 3.5e-05 0.0051 18.6 5.5 1 23 525 547 525 547 0.98

8 9 1.4e-05 0.0021 19.8 0.9 2 23 554 575 553 575 0.96

9 9 2.6e-05 0.0039 19.0 1.2 1 23 581 604 581 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00044	0.066	15.1	0.8	2	23	318	340	317	340	0.94
2	9	0.19	28	6.8	1.5	1	23	346	368	346	368	0.98
3	9	0.0015	0.22	13.5	0.1	1	21	402	422	402	423	0.93
4	9	0.00069	0.1	14.5	1.7	2	23	441	462	440	462	0.97
5	9	2.5e-05	0.0036	19.1	1.4	2	23	470	491	470	491	0.97
6	9	0.00078	0.12	14.4	2.7	1	23	497	519	497	519	0.96
7	9	3.5e-05	0.0051	18.6	5.5	1	23	525	547	525	547	0.98
8	9	1.4e-05	0.0021	19.8	0.9	2	23	554	575	553	575	0.96
9	9	2.6e-05	0.0039	19.0	1.2	1	23	581	604	581	604	0.98

Sequence Information

Coding Sequence: ATGAATACTACAAAAAATGTGTATTGTCGCCTTTGCGCCAAGTTAAAACCACCCAATGAACTCACAAACCTGCAGACTGACGAAGAAACGTGCCAGAAAGTCGtcaataaactgtcaaaattcaaCATAATGATGGATTTCCAGGAGAATAATACATTACCTAAGACTGTTTGCCTAATATGTGTAAAATCCTTAGAACGAGCATTTGCTTTCGTGACTGCAGTTGAACAGGCGCAGGCATTTTTAAGTGACTTTAGTCTGGTTCAAACAAGATCTGTAAAAAGTGATTCTTATGGTGAAATCACCTTTTATGCGCCATCAAATGTTAGTAAAGAAGTTATTGGGGTTAAAGTCGAAAGCAGTCGGGATCCAATGGATGTAAATGATAATGGTGATGAAGAATGTGATAATGAGGACAATTGTGATGATTACAATGCTGATGTAAACAATTTAGATAGTGAAAAAGTTAATATCGAGAAAAAGGACACTAGACAATATTCTTATGTTATTGTTGAAGAAAAAATGGGTATAAAGGAAGAAACTGATGAATGCACTgatgtaaataatgttaaaaatactGAGTCTCTTAATTTTAGTAATGACTGTAGAGAGAATCAATATATCAATGTTAGAGAAAATGATTTGAATCTCAAAGACACTAAAATAACCTCTACTTTGAAAGAAAAACTCAGAAAAGATAATTCAGAACACAATTCTGAACCATTAGACAATTCAGTTTATTCTGCAGATTACTTATCTAAACCAAATTATAGTACTGTGGGCCCCAAAACtgtggaaaaaaataaacataatcaaCCCATTACTGAACCAACCGCACATAAACAATTAGATACTATGGTATATTCAGAagattacataaataaacaaattaatagaTTAAGCACCGTACCCGTGCAATACCTAAAAATTACATGGATGGATTATGAATGGAAGTGTTCTCACTGTGGGACACTGTTCTCAAATATTGGAGAGCTACAGAAACATTCAATGATATACCACAACTCTTGCAATGCTTACCAATGCACtgattgtaaaattaaaaagcaaCGTCTCAATGCTTTCATCAAGCATGTCAGATCACACAGGAAGTACTTACATTATTCATGCTACAAATGCTTTGAGAAATTTCCTAAAATGATGGAAACCATTCATCACAAGACAAAAATCCATGAGAACTCTAAACATGTCTGCTTGGGATGCAACACTCCTTTTTCTAGTAACACTGAATTAGAAGAACATGTCAACAAGTATTATAATATTCTTTGGAGACGGAAAACATTTATCAATAGTGACAATTTAACTTGCAGTACTTGCAACAAGGTTTGTGCAAACGTTACTGCTTTGAGGAACCACTTAAACAGGCacaaagaaaagaaacgagatcGTGTTTGTGACAGATGTGGCAAATGTTTCGATAGTGAACCAAGTTTAAGAACTCACATGGATACACATATAGATAAGATTTTATATCATTGTGACATTTGTAAAACTACCTTCAAGACTGTATACTCACTACGATACCATGCGAGCATACACTCGGGAATCAAACCGTTCACCTGTGATGTCTGCAGTAAATGTTTTAGAACCAGAAGTCAGATTACAAATCACATGAAATTTCATACGGACTATTTTCCTATTAGTTGTACAATTTGTAACAAAAAGTTTCGTACAGACgcttatttacaaaatcatatGCTTCAGCATACTGGAGAGAAGCCATTTTCTTGTGACATTTGTCCGAGAGACTTTACAAACATGGCCAATCGTAACAAACATATGAGACGGAGACATGGTATTGAGATGGGAAAGAAGAGACAGCCTATTATAAAACAGCAAGCAGCTGATGACCCGACTTCCTCAGAGTTGGCTACTGGAGAGGCTAAATTTGCAGATCTAGACAAAATGAATGaatggaaaaataaaattatggaaCATCGAAAAAGTCAAAGGGCAAACAACAAGAATATAAAACTGAAAGTGATTAGCAAACAATGCAATGAAAATTAA
Protein Sequence: MNTTKNVYCRLCAKLKPPNELTNLQTDEETCQKVVNKLSKFNIMMDFQENNTLPKTVCLICVKSLERAFAFVTAVEQAQAFLSDFSLVQTRSVKSDSYGEITFYAPSNVSKEVIGVKVESSRDPMDVNDNGDEECDNEDNCDDYNADVNNLDSEKVNIEKKDTRQYSYVIVEEKMGIKEETDECTDVNNVKNTESLNFSNDCRENQYINVRENDLNLKDTKITSTLKEKLRKDNSEHNSEPLDNSVYSADYLSKPNYSTVGPKTVEKNKHNQPITEPTAHKQLDTMVYSEDYINKQINRLSTVPVQYLKITWMDYEWKCSHCGTLFSNIGELQKHSMIYHNSCNAYQCTDCKIKKQRLNAFIKHVRSHRKYLHYSCYKCFEKFPKMMETIHHKTKIHENSKHVCLGCNTPFSSNTELEEHVNKYYNILWRRKTFINSDNLTCSTCNKVCANVTALRNHLNRHKEKKRDRVCDRCGKCFDSEPSLRTHMDTHIDKILYHCDICKTTFKTVYSLRYHASIHSGIKPFTCDVCSKCFRTRSQITNHMKFHTDYFPISCTICNKKFRTDAYLQNHMLQHTGEKPFSCDICPRDFTNMANRNKHMRRRHGIEMGKKRQPIIKQQAADDPTSSELATGEAKFADLDKMNEWKNKIMEHRKSQRANNKNIKLKVISKQCNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00037202;
90% Identity: iTF_01440414;
80% Identity: -