Tcit037623.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963921375.1
- Location
- OY992802.1:18275571-18290104[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-13 1.4e-10 42.1 0.0 1 37 109 146 109 150 0.92 2 2 3.2e-18 1.9e-15 57.8 0.0 1 43 319 362 319 364 0.95
Sequence Information
- Coding Sequence
- ATGGAAGAGCATATACAGCGACACGTGCGCGTGCGGCTCAGGTTCTTACGTTCCTGTGCAACTGTTCCTGCGTCGCGCAGTACTCAGGACGCAGATTTCTGCGCGCAGCTAACACGTGCGTTTAGTTATCCTTGGCTACCGGAGGTGGGCGAGAAGGCGCCGGCGTCTTCGTCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGTGCAGTTCATGAGAGCACCAGCAACAGTTCTGGTCGTCGCGCGTATACTGAAGAGGAGCTACAGTCAGCTGTCCGTGACATCCAGTCGGGCCGGCTGGGCACTCGCCGAGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAGTTCGGCACCATCGTTGACCACGCTGACTCCGACAACGACAGTGATGCTGACCGCGCCGACTCGCCCCCCTCCGTCATTCTCAAAATACCTACATTCCCCCCGCCAGACGACAAAAGCCCATCCCCCGCTGGACAACTCCAAGCCCCCATTGCGCCAATAACTCCGATGCTCCCCACGGGACAATCCTCACTCAAGGGACCCTCACAGCTGCTGCTCCCGCCCTCCGTATTCGCTGACCCTCCCTCAACACAACATCTCTTCACGTCCCTCAGTGACGTTATCGCTAAAAGCATCAGCCAGAAGTTCAATCAACCCTTAGATAGGCCGCACCACCAGCCCAGTGAACTTATGTACGCACGAGGCCCTGATCGACATGTGTCTGTCATCAAGACTCCGCCTGATAATCAGCGCTACCCTGCGCCCGGCAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCCACCGGCGGCAAGGGTACGCGGCCCAAACGTGGCAAGTACCGGAACTACGACCGCGACAGTCTCGTTGAGGCAGTGAAAGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCTTACTATGGCGTGCCGCACTCCACGCTCGAATATAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCACCTCAGGATGTCAATAAACCGCAGCCACCAAAGCCACCGCCGCCGAAACCGCCGACGAAGCCGTTCTCCAACGGACTCAACGGGCCGGAAGCGCCGGGGTATCCTCCCGGCTATCCGTTCTGGCCAGGAAGTGGGTTCCCACCGCCGCCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGACTGCGCGAAGAAGCGCCCCCGCCCGCGAACGGCTCGTTCCTGGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCGCCGGGCGGCGAGGCGCGCCGGCCGGCCGCGCCCGACGCCGACGAGCCGCCGGCGCGCCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCTCGGGCACGCccacgccgccgcccgcgccgccggccgagccgccgccgccgccggccgcgccgccggaCCGCGCCTAG
- Protein Sequence
- MEEHIQRHVRVRLRFLRSCATVPASRSTQDADFCAQLTRAFSYPWLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVHESTSNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTIVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQLQAPIAPITPMLPTGQSSLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFNQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVNKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEARRPAAPDADEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRSGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -