Tcit035077.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea citrago
Gene Symbol
ct
Assembly
GCA_963921375.1
Location
OY992800.1:23016971-23024782[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-32 6.9e-28 97.9 0.0 4 77 337 411 335 413 0.96
2 2 9.6e-31 9.8e-27 94.2 0.0 3 75 543 616 541 620 0.95

Sequence Information

Coding Sequence
ATGACACGAAGATTGTTTCATAGATTAATCATATCGAAGACAAAGAAAATTGCCAAAAttGGGACGAAGGATGGCACCGGCGCAGTCTTTGGTCGGCCGGAGGGTGAGGGTGACGACAGGCTCACGCATGCGATTCTGAGTGAAGCGCATCTGATGAAGACGGCCAGTGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCTAGCTCGCCGAGGACTCAGTGTCCTTCACCTTTCTCCAATAAGGACGGCAGTCAAAACAGAAGACTCAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAGGATATTCGCCGGGAAGGTTTCCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGCTGGCAACATTCCCAACCTCCACAACTTGCCGGCCATGCCGCCCTTTCCGAACCTCCTCGCGTTGCAGCAGCAAGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGTGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGATAGGTCAATGGATGCCGAAGACGCTATTAGGCACGCGGGGAGCGCGTTCTCGTTAGTAAGGCCAAAACTAGAGCCGGGACAGCAATCAACGGGATCGTCCGCGTCCAGTCCACTGGGGAACGCGATACTACCACCCGCAATTACTCCAAATGAGGACTTCAGTAACTCAGCAGCGGCAAGTCCACTACAGAGGATGGCTTCGATCACGAACAGTCTCATCTCCCAGCCGTCAAATCCTCCTCATCATCCACCTGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAACTTGAATACAGAAGATATCGTTAGGAGAGTGAAAGAGGCTCTGAGCCAGTACTCCATTAGCCAAAGGCTATTCGGAGAATCCGTCCTTGGTCTATCGCAAGGATCTGTGAGTGACTTGCTAGCGAGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGACGAGAGCCTTTCATCCGCATGAAAATGTTCTTAGAGGATGACAATGCTGTCCACAAGTTGGTAGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAAAAGATGATTTCCGACGCGACGTCCCTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGTGCGGGTCACCTGGGCCACCTGGGGCAGCCCACGCCGCTGCTGCTGACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACCTCGACAGCACTCACAAGGAGCGcaagccgccgccgccgcacccgCACCCGCACCCGCACCACCAGCCGCCCGTCATGCGGAACTTGCACCAACACATATCGCCGAGCGTCTACGAGATGGCCGCTCTCACCCAAGACCTAGACACGCAAACCATAACGACCAAAATAAAGGAAGCGCTACTGGCAAATAACATTGGCCAGAAAATCTTCGGCGAAGCTGTTCTAGGTCTATCACAGGGTTCTGTCAGTGAATTGCTATCAAAACCGAAGCCCTGGCATATGCTCAGCATTAAGGGTAGGGAACCCTTCATTCGTATGCAGCTGTGGTTAAGCGATGCCCACAATATTGACCGCCTACAGGCTTTGAAGAATGAGCGACGAGAAGCGAGTAAACGACGAAGGTCAAGTGGCCCCGGGCAAGATAACTCGTCTGACACATCATCGAATGATACGTCAGAGTTCTACCACTCGAGCTCGCCGGGCCCCACCGCGGGAGCGCCGTGTGCCAAGAAACAACGAGTGCTGTTCTCCGAAGAGCAAAAGGAGGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTGTCATCGCGAACCATCACCAACTGGTTCCACAACCACCGTATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCGGCCGAACCTCCCGCGCGGGATCAATCCTCAGCGCCTTTCGACCCGGTCCAATTCCGTCTTCTCCTCAATCAGAGACTACTGGAACTTCAGAAGGAGAGAATGGGTCTCGCTGGCGTCCCCCTACCGTATCCGCCTTACTTCGCAGCCAACTCCAACTTAGCGGCGCTAATTGGCCGCGGGCTAATACCCCCCGAAGACCAGGTGAAGGACCAGTCGGGCGGCCTCGACCTCTCGATGCCGCTTAAACGAGAACCCGATGGTGATGACTTCGAGGACGATGACGTCGAGAGCAACCTCGGTTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCGTCGACGCCGCACGCTACAGGACGATCCAGCAGACGAAAGCCTGCAGCGCCGCAATGGGTCAACCCTGACTGGCAGGATGAGAAGCCGCGCAACCCTGACGAAGTGATAATTAATGGAGTATGTGTGATGCGAAGTGATGACTTCCGGAGAGAGGCGGAGGAGACGGTGCTCGTGGAGCCGTCGCCGGTGGCGCGCGAGGGCTCGCCGGCCGCGTCGCCCGCGCCGCGCACGCCGCACACGCCGCTCACGCCACACACGCCACACACGCCACACACGCCACACACGCCACACACGCCGCTCACGCCGCacacgccgcgcccgccgcaCATGCCTGACGATGTGATCCCCGAAGACAAAATCAAATCCGAGACCGACGACGGCTGGGAGTACTAA
Protein Sequence
MTRRLFHRLIISKTKKIAKIGTKDGTGAVFGRPEGEGDDRLTHAILSEAHLMKTASGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPAGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRSMDAEDAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHLDSTHKERKPPPPHPHPHPHHQPPVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVLVEPSPVAREGSPAASPAPRTPHTPLTPHTPHTPHTPHTPHTPLTPHTPRPPHMPDDVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00622600;
90% Identity
iTF_00445005;
80% Identity
iTF_01440880;