Tcit044532.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- arid5b
- Assembly
- GCA_963921375.1
- Location
- OY992810.1:13684736-13706506[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-14 3.1e-10 41.8 0.0 3 89 233 306 231 306 0.89
Sequence Information
- Coding Sequence
- ATGGCTCCATCTGACGTTAAGGACGAAGTACTAGCTATCAACGACAAGGTAGTCCTCCGCGCAGACGACCTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGTTGGGGGCTGCGGGCAGTATGGCGTGGCGCCTGCGCCCCTCCGGCTGACCTGCCCCGCCACGCGTCGCTCACGCATACGAAACTGGACTTCAGCGATGTGGATACTGAGAAGAGTGCTATTGTGGTAGACACAGACGCTCCAGGAGTGGTAGTCTTCTCCTACCCGAGGTACTGCCGCTACAGGGCGCTAATAGCCAGGCTCGAAGGCATCCAGGCATCTTGGCTGCGAGACTCCTTAGTCGCGGCTCTAGGAGGGTACGCGGCACCGACCGCTAACACCAGGATACTTTACTGCAAGGACACATTCGAGTACCCCGAGCTGGAAGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAGGGCCGGCCGCGCGGGCGCCGGCGCCGCGCGCACACGCCCGACCACTCGCACGCCGCCGGCGAGCGCGGCTCCGACCGCTCCGACTCCGACgagccgccgcacagtgggcccgcGCATAGCAGCGACCCGCCGACCCCCCGCCGCCTGTCCCTCCGCAACGGCGCCCCTCCTCCCAGCGACGAGGACGAGGAGGAGTACAAGCGAGTAGAACAGACCCCCGAGGACAGAGCCTTCCTCCAGGCACTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAAGAGTGGACGCACTCTGAAGCACTTATCTCTACGCGCGCTGTACGTGTCGGTTGTGTCGCGCGGCGGGTACGAGGCTGTGTGCCGGCACCAGCTGTGGCGTGCCCTGGCCCGCGACCAGCCTGCCCGGACCAGGAGGCACTACGAGAGATTCCTCCTCCCGTTCGAGAACCACGAGCGACGCAACGGCTCGTCCCTTAAACTGAACGGCAAGCTGGACCCTGAGCCGCGCACCATCGCCACCATCGACGTCACGCAGTCCCCGCGCCGCGACCACAACGTGCTGCGCACGCCCTCGCCCGCGCCCAGGCTGCAGCTGTACGGCAAGCTCGGCAGCTTCGACCGGCTCGACCAACTCGGTATCGACAGCGAAACTGGAGAAATAACCACCAAAGATGAAATTATAGTCAAAAACGCCGAAGAGCTGAACAGAGAGTTTCTAGACTCTCTACCGAAAGAGGAGAAAACGGTTAAAATTTCTGTGAAACCGGTCGAGAAGCTGATCGAACCGGTTAAGGTTTTTGAGGGCTTGGATGTGTCCAAGTTGGAGGGACCGAAGGATGAGGGGAAGGATTTTAGTCAAAACTATTTGAATGATATGCAGAAGTTTAGTATGGGAGCGGAGTGCCTGTCGGCGCGGCCCCCGCCTGTCAACGGgcacgccgcgcccgcgcccaccGACCTTCAGCCGCCCCGCGGCCGCAGCTCGCTGCGCGCCGTGCGCGTGAAGCCGGCGCGCGCGCACGTGGACCCGGCGCGCGCGCACGTGGACCCGGCGCGCGCGCACGTGGACCCGGCGCGCGCGCACGTGGACCCGGCGCGCCCGCACGCGCAGCGCGGCGCCTGCACGACCGCCACCCCCCGCCCGCTGCGGCCGGAGTCCGTCCCGGTGTCGCCGCCCGTCACCAACTTCGGCATCCACCGCCCGCCCAGCGCGCACCACGACGACGACATCGTCGAGGTCCCCTACAAACCGAAAACCCCAGAAATTATCGACTTAGACGAGTACCCAGAGAGCCCccaaggaataaaaaaaaagaaactggaCATCCTCAAAGAGCGAGGCCTCGAAGTGACCGCCCTGCCGGCCCCCTGGCAGGGCGTGGGCCCCCACATCATGGCCCCCCCCATGCTCCTCAACCCAGCAGTACAGCACCAGATCATGACGCAAGCCCAACTCTTCCAAATGTACAACATCATCCCTCAAAACTATGCCAACGGTATACAGCCTCCGAAAGTCATTCAAGCGTCTTCTATCTTCGGTAACACAGGGCCTGAAAAGACTGTATACGGGAACCCTAAGGACCCCTTCATGCCACCTCCTCATGTTCTTCACGGAGTGCCAGTCAAACCTTTGAAGACTGCGCCCCCTCCTACCATTCCTCAGGATATACTGGACCTGACCTGCAAGTCTTCAAGCCCCCCTCCGCAGAAACCAGCGGTCGAGATAGTAAGGgtgcccccctccccctccccaaCGGCACAGAATTTAACAAAGAATTACACTTTAGTTGACGGTAAAGCAGTCGTCGGGTCGAATTTAGAAATTACTTTAGTCAATAAAGCTGTGAGTCCTGGTAAAAATCGGCCTCCACAGAAGAGGTCCAGCAATGGAAAGTTCATGTCGGCCAAAACTCCTACCCCGCCTAAGGACCCCTACCCTAAGTACACCTCGCCTACCACTACGCAGAAAAAACCACCTATTAACATCCCCAACTACCAAATCAGAGATGACTCTTCTCCTACCCAAAGCCAGGTTCTGCAAAACGCAATGAAAAATCAGAATCTAGCTCAAATAATGGATTTGCAAAAGAACTCAGTTCCTATGACGTCTTTCATGGATCCTTACGTGGCTTTATACAGCAGTTTGGCCGGTCAAATGGACCAGAGACAACTGGCGATGTACCGAGACCTCATGACCAATCAATTTAGGTACCCAGGACTTCTAAACCTTGGCGTAGCAAcaccgacaacgaaaaattag
- Protein Sequence
- MAPSDVKDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHASLTHTKLDFSDVDTEKSAIVVDTDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTANTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDHSHAAGERGSDRSDSDEPPHSGPAHSSDPPTPRRLSLRNGAPPPSDEDEEEYKRVEQTPEDRAFLQALKMFYKSRSEPFKSGRTLKHLSLRALYVSVVSRGGYEAVCRHQLWRALARDQPARTRRHYERFLLPFENHERRNGSSLKLNGKLDPEPRTIATIDVTQSPRRDHNVLRTPSPAPRLQLYGKLGSFDRLDQLGIDSETGEITTKDEIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPVKVFEGLDVSKLEGPKDEGKDFSQNYLNDMQKFSMGAECLSARPPPVNGHAAPAPTDLQPPRGRSSLRAVRVKPARAHVDPARAHVDPARAHVDPARAHVDPARPHAQRGACTTATPRPLRPESVPVSPPVTNFGIHRPPSAHHDDDIVEVPYKPKTPEIIDLDEYPESPQGIKKKKLDILKERGLEVTALPAPWQGVGPHIMAPPMLLNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPTIPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAVSPGKNRPPQKRSSNGKFMSAKTPTPPKDPYPKYTSPTTTQKKPPINIPNYQIRDDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00374957;
- 90% Identity
- -
- 80% Identity
- -