Tcit005828.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- Jarid2
- Assembly
- GCA_963921375.1
- Location
- OY992780.1:29375875-29406068[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-20 1.2e-16 62.3 0.1 13 89 1027 1100 1016 1100 0.90
Sequence Information
- Coding Sequence
- ATGCTATGGTcagGTCACTTCCATTTGACTTCACAACCTGTAGTGATCGTTGAGCGGCTGCGCGGCAGGGAACCGGCTCGCGACATGCCGCCGCCCTCGCAGATCGAGACTGTTGAACCACGACCCTGGGAATGCCCTAATGAACGTGTGAATAACAATGTGGCCACAATCAAGAAACCTGCTGAGCCACCAAAGTTGCAGactgttaaaaaaaagaaagaatataaaCAAGAACATCCTATGGCACTAAGATGTCGGCGCCAGAGCAAGCTTGTATTAAACAAGCTTATAGCTGAAAGTTCTGTTCCTCTCAGAAAGGTGGCTTCGAAGCGAAAGAAGAACTCTTCTGACGAGGATGAACCCCTCATATTCCAGAAAACTCGACTAAAACAGACAGAAAAACGATTGAGCACTTCAAAACAGACTGCTGCAAGGGAGAGTGCTCCCAAGGAGAACACTCTTAAACCGAGCCCTCCCAAGGAGAAAGCTCCTAAACCGAGCCCTCCCAAGGAGAAAGCTCCTAAACCGAGCCCTCCTAAGGAAAAATctcctaaaaataaaacttgcaaGAAGAGATCTAAAAAGGATACCACCACACACGAGACCATTACAACGGAGATCACTACAAGCGTGACCGCTACAAAGAAGATTACCAGAAACGTGATCACTTTAAAGGAAACTGATCTAAGAAATGCCAAGCAAAGTAttgctataaaaaaaactcgCATGAAGAGGGCTCCGCCGAAGAGGATTCATAAGAACCGCTCCCCCAAGCAGCGTGTGCATGTCGCACCAGAGTTCTCAATCACCGTCATCAAGGAAGGCCTCACGGATGAAATGGTCGTCAAGAACCATACGAAAGACCTGGTCACCCCAGGTGACGCGTTTACCATAGTCGTCCCGAATGACCCCCTAACCCAAGATGTCCTGGATGATATCGTTGCCCCGAGCGTCCCAGTCGTCACGGATGACCCAGTTATCCCGCCCATCCCGGTTAACCAAGATGTCTCGAAGGTTCCGATGGTGCTAGATAATGTGCTGGAACGCTCGGGAAGTCTCCCGGTTAATGCTGTTTTAGACGACGTACTGTCGGCTTTGGATGAGGTGTTTGAAGAGGAGCGTATTGCTTTCCCGGTGATTTTGCATGATGTACCGATGGTAAACGATGATGTTCCAGAGGTCCCGGATGATGTACCGGTGATTTTGCATGATGTACCGATGGTCAGCGATGGTGTTCCGGAGGTCCCGGATGATGTACCGGTGATTTTGCATGATGTACCGATGGTCAACGATAATGTTCCGGAGTTCCCGGATGATGTACCGGTGATTTTGCATGATGTACCGATGGTCAACGATGATGTTCCCGGGGACACGAAAGAAGTACCTGTAATTTTACATAATGTACCGATGGTCAACGATGTGCCGGAAGACACGGGTGACCTAGATGTCCCATTGATCAAGAGTGCCATGAAAATCGATGTTGACGTAATGGTCCAAGAAGACGTAATGGATCCACCGAATACAAATCTTCGAATAACTTCTCCAGAACCTGGACCAAGCGGCATGCAGTTGCCATTCACAGTATATAACTCCAAAGAATACGACGCGAACTACAGTGATCAACGAATATACGAGGTGGACCTGAAAGAAATCTTGCAAAATACAGCAGCCAAGCTTGAGCGTGCTAAAGATGTTCAGTTCGAGGTACCGACAACTTGCGTCGCGGCAGAGTGGCGCTCTGACCAGGACGTCATAAACGCATCTCAGGAATTACTGGACGCACGCTGCAAAGTGTGTAAGCCCTGCATCAGGATTGAAAAACTGATGAAAGTTTCGACTTTACTAAAATCTCAAATTGAATTAACGAGTAAGAGACAGGAAAACAATGCCGCGGCTCTACAGAACGAACCAACAGAAAGAGAAGGTGAAACAGAAGACGTTGAAATAGAAATAGACGAAGACGTGGATTCGACGAACGATACCCAAGGTCATCTTTACTTGCTATTACCAAAACATTCTTGTGTAATGCTGAAATTAAGGACCAGCATGGTACACGACAAAGAGGTCTTGGGGGTTCGTTTGATGCCGATAGATGAGTCTCTGAAAAACATACAAGAGTTCTCACTTGAAGAACAAGAACATTTACTTGACCAACTTATTGAGACCCTAACAATCGGTCAAGACGTCAATTCGGAGGGTCGAGACGTCGATTCGGATGATCGAAACGACAACACAGGGGGTCGAAACGACAACATAGCAGAGGGTCGAGACGACAATATACAGGGTCGAAGCGACAAATTAGAGGGGCAAAACGCCATTCCGGAGAGTCCAACGATAAGCATATCATCCGACAGCAATGCCGAGATGAGCGATGATACTACTCATGATCAAGAGATTTCAATCCGCCAGATAGccgagaaaagaaaaataaaacgattagCTGTTAAAAAGAAGTTAGCTGCAGCGGAGCTAATGCACGACCGCATGAGAGAAGAAAAGGAAAGACAGATTGCCCGCCTTGAGGAAGAGAAGAGACGGGAAATATCACGAATTACGGCAGAGAAGAATATCGTTGTCGCGGAGATGTCCCGCTACCAAGAGCGGTTTACGCAGATGGCGAAGGAGAAAGAAAGAGATTTTGCTCGCCTCAAGGTGGAGATCAGAGCAGAAGTGATATCTAAAATAGAGGCTAATCGCCGTATGTTCGCTGAAGTTGACGGCATGGCGGCGAAGCTTGCCAAAGAAAAGGATGCCAAGAAAATGGATCCAGAAGAGCTTGCAGATCCAGATACGCCTGGCACCAGCAGTTCCTTGCTTACAACGGATGGCGGGTTACTAGTAGACGCTCCTGTATACCAACCTAGCGAACAAGATTTTCTTGATCCACTTCGCTACTATGAGAAGATCTGGCCAGAAGCAGTTAGATATGGCATCTGTAAGGTGGTGCCCCCTCCTGGTTGGAAGCCACCCTTTCGAGTACATGACGAAATGAGGTTCGATGTTACGAACCAATACATTTCGCGACTGTTCAGCCGCTGGGGACCGGCCGCGAGAGAACTTTGTGCTATCAAGTTGTCCCTCGCACAGCAAAAAGTCAATTTTACACGAGCACCATTGTTGGATGGTGTCGAGGTAAACTTACCGAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGAGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGGCCTAATACTGAGAGGAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCACATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGCAAAAACCAAAAACTTTTGGACCGCGCCGTGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTAATGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAAGACTGTATTATCAAGGGTGCGGTCATGAACCGAGCTAAATTCAAAAAGATTGCCACCATGACGTACGAGAACACATTCGGACAAGGCTCGGAAGCTGCCGACCCTCCCGAACTAATCAAAATCGAGGAGTATTACTGGCGCCTCGTGACGCTGGGCACCGAGCACGTGTGCGTGCACACCGCGGCCATTGACACCGGCGAAGAAGGCTACGGCTTTATCAAAAATAAGTCTGACTCCTATGGACGCCACCCATGGAATCCTAAGATGGTTAGCCAGAATCCTCGCAACGTGCTTCAGTATTTGGGTCCCGTGTTGGGCGTAACGGTGCCCACTCTGCTTCTAGGAATGCTATTCTCGACCTCCTGCTGGCACAAGGATCCACATGCAGTATCTTGGTTGGAGTACCAGCTCTTAGGACCTGAAAGGATctgGTACGGCATCCCAGCACATCAGGCGGATAACTTCAGGAAAGCTGTAGAAACTCTTTGCCCGACATCTTGTCAAAACAAAGGTCTGTGGCTACCGACAGACATCACGATGATCCCGCCAAACTTGCTGCGTGAGCACAACGTGACGCTGTCGCGTGTTAGGCAGAGGGACGGCGAGTACATCCTGGCTTTTCCGAACGCTTACACCTGCTGCATCAGCACCGGCTACACAGAATCAGAAAGTGTGTATTTCGCACCGCCATCCTGGCTTGAGAGTCTGTGGACAGTCTTCAAGGAGGCACGAGAAAGTTGCGAGCCGACAATGTTCGCAATGGAACATCTGCTCTACAACATAGGCAAAGACCCGAAAGCTGAGCACACTATACTGAAGATCGCCCAGCCGTTATACGACAAGATGTTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCTCTTTTTTCAAGATTTACTGAGCGCCAGCACATCACGTAAGAAGAACAAAGCGAATCCGTTCAACCCGCGGGATCAAGACGAGTGCGAGTACTGCAGGGCCACGTTGTACCTCTCGAAGGTAAAGGGGCTCACCGGGAAAAATACAGTTCTATGCTTAGAACACGCACTCAAATTACTTGACACTGAAAAACATAAGGACAGGGACGTAGAGCAACTACAGGTTCTGGTGCACGTGAGTGTGAAAGAACTAAACTCCGTGCACGACGACATGAAGCGTCGCCTAGGCCTCCCGGTCGCCTAA
- Protein Sequence
- MLWSGHFHLTSQPVVIVERLRGREPARDMPPPSQIETVEPRPWECPNERVNNNVATIKKPAEPPKLQTVKKKKEYKQEHPMALRCRRQSKLVLNKLIAESSVPLRKVASKRKKNSSDEDEPLIFQKTRLKQTEKRLSTSKQTAARESAPKENTLKPSPPKEKAPKPSPPKEKAPKPSPPKEKSPKNKTCKKRSKKDTTTHETITTEITTSVTATKKITRNVITLKETDLRNAKQSIAIKKTRMKRAPPKRIHKNRSPKQRVHVAPEFSITVIKEGLTDEMVVKNHTKDLVTPGDAFTIVVPNDPLTQDVLDDIVAPSVPVVTDDPVIPPIPVNQDVSKVPMVLDNVLERSGSLPVNAVLDDVLSALDEVFEEERIAFPVILHDVPMVNDDVPEVPDDVPVILHDVPMVSDGVPEVPDDVPVILHDVPMVNDNVPEFPDDVPVILHDVPMVNDDVPGDTKEVPVILHNVPMVNDVPEDTGDLDVPLIKSAMKIDVDVMVQEDVMDPPNTNLRITSPEPGPSGMQLPFTVYNSKEYDANYSDQRIYEVDLKEILQNTAAKLERAKDVQFEVPTTCVAAEWRSDQDVINASQELLDARCKVCKPCIRIEKLMKVSTLLKSQIELTSKRQENNAAALQNEPTEREGETEDVEIEIDEDVDSTNDTQGHLYLLLPKHSCVMLKLRTSMVHDKEVLGVRLMPIDESLKNIQEFSLEEQEHLLDQLIETLTIGQDVNSEGRDVDSDDRNDNTGGRNDNIAEGRDDNIQGRSDKLEGQNAIPESPTISISSDSNAEMSDDTTHDQEISIRQIAEKRKIKRLAVKKKLAAAELMHDRMREEKERQIARLEEEKRREISRITAEKNIVVAEMSRYQERFTQMAKEKERDFARLKVEIRAEVISKIEANRRMFAEVDGMAAKLAKEKDAKKMDPEELADPDTPGTSSSLLTTDGGLLVDAPVYQPSEQDFLDPLRYYEKIWPEAVRYGICKVVPPPGWKPPFRVHDEMRFDVTNQYISRLFSRWGPAARELCAIKLSLAQQKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWSKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRAVNPLNRQKRLLGLMDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKIATMTYENTFGQGSEAADPPELIKIEEYYWRLVTLGTEHVCVHTAAIDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLQYLGPVLGVTVPTLLLGMLFSTSCWHKDPHAVSWLEYQLLGPERIWYGIPAHQADNFRKAVETLCPTSCQNKGLWLPTDITMIPPNLLREHNVTLSRVRQRDGEYILAFPNAYTCCISTGYTESESVYFAPPSWLESLWTVFKEARESCEPTMFAMEHLLYNIGKDPKAEHTILKIAQPLYDKMLREEVTNRQMLQERGLLFFQDLLSASTSRKKNKANPFNPRDQDECEYCRATLYLSKVKGLTGKNTVLCLEHALKLLDTEKHKDRDVEQLQVLVHVSVKELNSVHDDMKRRLGLPVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01439677;
- 90% Identity
- -
- 80% Identity
- -