Taur025193.1
Basic Information
- Insect
- Tiliacea aurago
- Gene Symbol
- -
- Assembly
- GCA_948098905.1
- Location
- OX402606.1:7348541-7370627[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 10 8.4e+02 1.4 0.1 1 23 232 255 232 255 0.86 2 10 3 2.5e+02 3.1 0.6 1 23 287 310 287 310 0.95 3 10 0.0044 0.37 12.0 4.0 1 23 352 374 352 375 0.94 4 10 4.6e-06 0.00039 21.4 1.6 1 23 379 401 379 401 0.97 5 10 4.6 3.8e+02 2.5 0.6 2 23 409 429 409 429 0.90 6 10 0.04 3.3 9.0 2.4 1 21 435 455 435 460 0.94 7 10 2.8e-05 0.0024 18.9 1.0 1 23 468 491 468 491 0.96 8 10 3.4e-05 0.0028 18.6 2.4 1 23 497 520 497 520 0.98 9 10 3.7e-05 0.0031 18.5 0.3 3 23 532 552 531 552 0.96 10 10 4.5e-05 0.0038 18.2 2.0 2 23 559 581 558 581 0.96
Sequence Information
- Coding Sequence
- ATGGACGACTGTCCAGAAGTAGAGTTAAAAAAGCTGTGTTGTACGTGTTTAAGTCGAGATAGAAAGTTGTTCCAACTGTGCAGAATAGCTGACGGCGTTAATAATTTATATTTGCTGCTATCCTTTGATTCTGAAGCATACAGGGAGGGATTCTACAAGGACACTGCTAGTTTATATATATGCTGGGAATGTAGAGCTGTCATGTGCAGAATCACACGGTTCAGGAAACAGGCCTGCGATGCCCAGAGGGAGCTGACGAGTATAGCTGATGGGAGAACTCATATTCAAACAACCAGCCTATCCCGCCTAACTACCCACCTTAATTGTACCTACCAAAAAGTAATCTCAGAATCAAACGCTACTTCAACAGACAATTTTATAGACTGTGGCTTAACCACGGACATAAAAAGCGAAAGTGAAGAGGACATACCTCTATCGGAACTCCACTGCAACTGGCTTTCTGACCATGAGACCGAGATAGTCACACCAGCCGTAGACTGTAAAGAGGAACTGTCAAACTCAAAAGATACCATAGACTACAAAGAGGATTTATTGTACAAATTGAAGAAGAAGAGGAAGAAAATTAAGAATGGGAAAAAGAAGAGTTATTATTCTACTGTTTTGATAAATGAAAGTGAGTTGGAAGAAATTAGGAGTAGTAATAAAATGGCAGTGAATTTAATTGATGCGGAATTTAAATGTGATAGCTGTATTGAAGGGTTTGGAAGTCAAGAAGAATTGGATGGGCATAATTCTTCTTTGCATGTAAATAAACCAGACCACCTGCAATGTGATATATGCCTAGTCTACACTCCCATATCAACATACCATGACCATAGAGGAGCACATTACCATAGACACGTTTGTCAGTTCTGTGTGTATACAGCCTATGATATAAATGATATGTTAACACATTTGAGGAGTGGACATGCTATGAAGAATTTAGTTTTACCTGGCAAAAGGAAAAAGACTCGCCACAAAACAGAAGTTTTGAACCCCGGTTCCAAAACTCGTCGAAAACCGTCCATGTTGGATAAGAGGACACCCTACGGATACCTGTGCACTGAATGTAATAAATATTTTGACAACAAGAATCAAAGATGGAAGCACGTCCAACGTCACCACAGAGAAGGTTACAAATGTGCTACATGCGGCAAGAGGTTCGCGTTCAAGAATAACCTCACGAGGCATGAGCAGCTCCACCAAGGCCCACCTCCCCGGGAAGAATGCGCCGTCTGTCACAAGATGATCCGTACAGACCTCGTCAAAGTCCACTCTCGCATACACGCGGACAGAGAGAGGTACACTTGCGCGGCCTGTGCCAAGTGTTTCGTCAGCCGCGCGTCCTATGAACACCATCTGAAGTATACTCAAGCACATGCACAGACCGATTTACACAAATATAAGTGCACTACGTGTGACAAAGGCTACCGGTCACGCGGCGAGTTGAGGGACCATGTGAACTATCAACATATGGGGAAGACGCAGCATAAGTGTCCTGTTTGCGGGAAGGCTCTAGCAACTCGTCGCTGTGTGACTCGACACATGCGGCGCGCGCACGACGGCGTCAAGGAAAGTGCCCGAGATAAGATATGTCAACAGTGTGGAAAAGCCTTTAGGGACAAGAAAGGCCTCCGTGAACATGAACTAATCCACACAGGTGAACGGCCTCTCTCGTGCGAGATCTGCGGCTGCACGTTCAGACAGAGTGCGTCACTGTACACGCATAGGAAGAGAGTACACAAGATATACACTAGTGCTAAGAAGGGTCTGCGCGGCGGGGCTATGCAGGTGGAGCAGAGCGACTCCGACTCATTAGTCGGCACTAAGGCAGAACTCAATAGCGCGACGCGAGAGGGACGCAAGGCAATAGTGATGGCTTAG
- Protein Sequence
- MDDCPEVELKKLCCTCLSRDRKLFQLCRIADGVNNLYLLLSFDSEAYREGFYKDTASLYICWECRAVMCRITRFRKQACDAQRELTSIADGRTHIQTTSLSRLTTHLNCTYQKVISESNATSTDNFIDCGLTTDIKSESEEDIPLSELHCNWLSDHETEIVTPAVDCKEELSNSKDTIDYKEDLLYKLKKKRKKIKNGKKKSYYSTVLINESELEEIRSSNKMAVNLIDAEFKCDSCIEGFGSQEELDGHNSSLHVNKPDHLQCDICLVYTPISTYHDHRGAHYHRHVCQFCVYTAYDINDMLTHLRSGHAMKNLVLPGKRKKTRHKTEVLNPGSKTRRKPSMLDKRTPYGYLCTECNKYFDNKNQRWKHVQRHHREGYKCATCGKRFAFKNNLTRHEQLHQGPPPREECAVCHKMIRTDLVKVHSRIHADRERYTCAACAKCFVSRASYEHHLKYTQAHAQTDLHKYKCTTCDKGYRSRGELRDHVNYQHMGKTQHKCPVCGKALATRRCVTRHMRRAHDGVKESARDKICQQCGKAFRDKKGLREHELIHTGERPLSCEICGCTFRQSASLYTHRKRVHKIYTSAKKGLRGGAMQVEQSDSDSLVGTKAELNSATREGRKAIVMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119731;
- 90% Identity
- iTF_00124660;
- 80% Identity
- -