Basic Information

Insect: Tiliacea aurago
Gene Symbol: -
Assembly: GCA_948098905.1
Location: OX402604.1:7935767-7957550[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.059 5 8.4 0.3 1 23 440 466 440 466 0.93

2 8 0.0022 0.19 12.9 1.2 2 23 538 559 537 559 0.97

3 8 0.073 6.1 8.1 0.2 1 23 563 585 563 585 0.97

4 8 0.19 16 6.8 1.4 1 20 590 609 590 613 0.88

5 8 1.3 1.1e+02 4.2 2.9 1 18 619 636 619 642 0.81

6 8 0.11 9.4 7.6 1.0 2 23 650 672 649 672 0.96

7 8 3.4e-06 0.00028 21.8 1.3 1 23 678 700 678 700 0.98

8 8 0.0002 0.017 16.2 2.6 1 23 706 728 706 728 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.059	5	8.4	0.3	1	23	440	466	440	466	0.93
2	8	0.0022	0.19	12.9	1.2	2	23	538	559	537	559	0.97
3	8	0.073	6.1	8.1	0.2	1	23	563	585	563	585	0.97
4	8	0.19	16	6.8	1.4	1	20	590	609	590	613	0.88
5	8	1.3	1.1e+02	4.2	2.9	1	18	619	636	619	642	0.81
6	8	0.11	9.4	7.6	1.0	2	23	650	672	649	672	0.96
7	8	3.4e-06	0.00028	21.8	1.3	1	23	678	700	678	700	0.98
8	8	0.0002	0.017	16.2	2.6	1	23	706	728	706	728	0.98

Sequence Information

Coding Sequence: ATGTCGTTGGTAAAAACTGAGATAGAGACGTTTTTCGGTAGATGTAGGTGTTGTCTATCCTATGGCTATTTAAAAAACATGTGGGCAGAACATCAATTTGAAGAAGAACCAGAAATCTATGGCGAGATGCTTGTCCAATGTTTTGCACTGACCTGGGATCATTCGGAGGACTCTATGGAACAGGATCAGATTTGCGAGCAGTGCATCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTGGACTCACAAGAAGAGCTGTTCCAGCAGATAGATGCTGGAAACAAAACAAACATCAAAGAAGAAAGCCTAGATGAGGACTTTCTGATAGAATACAAAGATTCTGAGGGTGAAGACACTGCGGACATTACATACGCTGACACAGAATGCACAGAAGACACTGTGACGAGTGTCAGAGATGATACAGAGTATGTGGAGGTTGAATATTTGGAAGATGAAGATGCTGGTGGAGCAAAAGATGATGTTGATACTGACTCGTCACAACCAACAGTTCAGTCGAAACCAGCAAAACGGCAGAAGCAACCTCGCAAACAAGACTCCGATGATGAGGAAACGCCTAAACGGAAATGGCCCAAAAAGCTGCCTAAATCAGAACGGCACAGAACTTACAAACAATACTCCGAGGCTGATCTACGCAAATGTCTAGAAGAAGTCAGGAACAATGTGCTGACGGCTGCTGAAGCGGCTTTGAAGTATGATATACCGAAGAAGACTATTTCTGCCAAGATTAAAGTGGATCCCAATGATGTCCTGATTGACAATACAACGAAATCCAAATTGGAACGATCTAAAAAGAAACTGAGGACAATGCCCACCATCTTTAAAACCAAAGCATCTTTTTTGGATGATAAAACTAAAAAAATAATCGAGATTAATAAATTAAAAGCAAAAAACAAAACAACACCGGTCGTAACCGCAGTAATAGACGATGAAATAAATATTACCGAAACAAAAGTAATTGCCATAGAGATTAATATGGAGCCTAAGATAGAAGAAATGGAAGTTCCAGTGAATGCCGATCAAGTCCGAACGCGGTACAAGGCTATAGTCAACGACAAATTCAAGAAAGAAAATAAAGAGCCAGAGAAATTTGAAGTCAAAGAAATGAATAAACACAAAGACAATATAAGGACTGTACTACAAAATTCTAACGCGACCATCATCAAAGGATTCGGGGGAACTGCCGGCGAAGTGGATTTGAATCGAGAGAAGACTTACCAATTCATAAAAGAAATCAATGCTATTCTAACATTCACGAACGCGACCCCTTACAAGACGAAGAGCGTTCGCTACTACTGCGCTTACTGCCCCAATGACGCACCTCATTTCGAAGACCCCGACGACCTGCGAACCCACACAAAGACTGAACACGTCAGCCACAGAATAGACAAGATAGAAAATGTCATGCGACCTTTTTGGATGAACGAGGTAATCAAACTAGATATAGAAAACCTCCACTGTACTGCTTGCTGCGTAGTCATAAACAATTGGAATGAAATGTTCAAACATTTGAAAGATAAGCATGGTGTAGTGTTAGATCAAGCGTATACTAGAGCCATTCCTTACGTTTTAAAGGCCGATAATCAATGCGCGTTGTGCAAAGAATCATTCTCTAATTACCTCCATTTAGATAGTCATATGAACGCTCATTACAATAATTATGTGTGCGATGACTGCGGAGACACATTTCTAGCCCAAAATCGTTTAAAACAGCACGTGAGAATCCATAACGTAGGCAAATTCGAGTGCAGGTTTTGCGAAAAAATTTTTACTCTCTCAAAATATAGGCGGAAACATGAAGTGTTAGTTCATCAGCAAACATCTAAGTTTAAATGTTTGTACTGCCCTGAGAGGTTCACAGGCGAGTACCAAAGACACTTACATTGCCTAGAAATGCACGCAGAAAAGATTAAAACTACGACCTGCGAATTCTGTGGGGACAGTTTTACGTGGAAACCGTACTATTTGAAACATATTAGAAAAAAACATAAGAATAAGAAATCCTATGAATGTGATAAGTGCGACAAGAAATTCTATGGGAATTATGAGCTGAAGGAACATATGTTAAGGCATGTTGATACTAAGAACTTTGAATGTGAAGTTTGCCATAAAAAGTATGTGACCATGAATTCATTGAAGAATCATTGGAGGCAGCATAAGAACAAAAATGAAGCGTGA
Protein Sequence: MSLVKTEIETFFGRCRCCLSYGYLKNMWAEHQFEEEPEIYGEMLVQCFALTWDHSEDSMEQDQICEQCICRLRDASDFKRVVLDSQEELFQQIDAGNKTNIKEESLDEDFLIEYKDSEGEDTADITYADTECTEDTVTSVRDDTEYVEVEYLEDEDAGGAKDDVDTDSSQPTVQSKPAKRQKQPRKQDSDDEETPKRKWPKKLPKSERHRTYKQYSEADLRKCLEEVRNNVLTAAEAALKYDIPKKTISAKIKVDPNDVLIDNTTKSKLERSKKKLRTMPTIFKTKASFLDDKTKKIIEINKLKAKNKTTPVVTAVIDDEINITETKVIAIEINMEPKIEEMEVPVNADQVRTRYKAIVNDKFKKENKEPEKFEVKEMNKHKDNIRTVLQNSNATIIKGFGGTAGEVDLNREKTYQFIKEINAILTFTNATPYKTKSVRYYCAYCPNDAPHFEDPDDLRTHTKTEHVSHRIDKIENVMRPFWMNEVIKLDIENLHCTACCVVINNWNEMFKHLKDKHGVVLDQAYTRAIPYVLKADNQCALCKESFSNYLHLDSHMNAHYNNYVCDDCGDTFLAQNRLKQHVRIHNVGKFECRFCEKIFTLSKYRRKHEVLVHQQTSKFKCLYCPERFTGEYQRHLHCLEMHAEKIKTTTCEFCGDSFTWKPYYLKHIRKKHKNKKSYECDKCDKKFYGNYELKEHMLRHVDTKNFECEVCHKKYVTMNSLKNHWRQHKNKNEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -