Basic Information

Insect: Tiliacea aurago
Gene Symbol: -
Assembly: GCA_948098905.1
Location: OX402606.1:14771007-14806892[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00026 0.022 15.8 3.1 1 23 258 280 258 280 0.99

2 12 0.094 7.9 7.8 0.5 2 23 288 310 288 310 0.96

3 12 0.79 66 4.9 3.8 1 23 314 336 314 336 0.97

4 12 0.028 2.4 9.4 1.1 1 23 341 364 341 364 0.94

5 12 0.018 1.5 10.1 0.5 1 23 368 391 368 391 0.96

6 12 0.13 11 7.3 2.7 1 19 403 421 403 423 0.98

7 12 0.021 1.8 9.8 0.8 2 23 436 457 435 457 0.95

8 12 0.0019 0.16 13.1 1.7 2 23 462 484 461 484 0.96

9 12 3.9e-05 0.0033 18.4 0.5 2 23 504 525 503 525 0.97

10 12 0.011 0.9 10.8 0.8 1 23 531 553 531 553 0.97

11 12 5.9e-05 0.005 17.9 1.9 1 23 559 581 559 581 0.94

12 12 5.9e-07 5e-05 24.2 2.3 1 23 587 610 587 610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00026	0.022	15.8	3.1	1	23	258	280	258	280	0.99
2	12	0.094	7.9	7.8	0.5	2	23	288	310	288	310	0.96
3	12	0.79	66	4.9	3.8	1	23	314	336	314	336	0.97
4	12	0.028	2.4	9.4	1.1	1	23	341	364	341	364	0.94
5	12	0.018	1.5	10.1	0.5	1	23	368	391	368	391	0.96
6	12	0.13	11	7.3	2.7	1	19	403	421	403	423	0.98
7	12	0.021	1.8	9.8	0.8	2	23	436	457	435	457	0.95
8	12	0.0019	0.16	13.1	1.7	2	23	462	484	461	484	0.96
9	12	3.9e-05	0.0033	18.4	0.5	2	23	504	525	503	525	0.97
10	12	0.011	0.9	10.8	0.8	1	23	531	553	531	553	0.97
11	12	5.9e-05	0.005	17.9	1.9	1	23	559	581	559	581	0.94
12	12	5.9e-07	5e-05	24.2	2.3	1	23	587	610	587	610	0.98

Sequence Information

Coding Sequence: ATGGAAGATTTACTAGCGTGTCGAGTCTGCCTCGCTACCAGCGTAAATCTGTACGATTTATACAAATACAAGCTCAAAAATCTATTCGAAATATTCAGTGGAATTCAAGTCATTTCTGAACTCCGTAAAGAGAACTGCAACCGCCGCATCATCCTCCATCACGACAATGCGAGTTCTCACACCGCGCACAGAACAAAAGAGATCTCCGAAGTGTCCCCAGCTGACAACTACCCTCAATACTTATGCAGTTACTGCAGTGCCTTGCTTCTCAAATGCGATGCCTTCAGGGAGAGATGTCGCAAGTCACAGGAGCTCATGAAGTATGCCGAAATGAAGAGTCGCTTTTTGACAACCTCACAGATTCACTCGATAGCCGTATCCCACCACACTGCACTGCCCTTCTCCGTGTCAACTTCAGAGTCAGCTACCATATCAGACATACACATCAAGACTGAGGAACCTGTTATTGATATATTATTTTTGAAGGAAGAAATTGACTTTAGTGATGAAGAACCTCTAGCTAATAAGGTTAAGAAGAAGGAGCAAGACAATGGCATAGAAGTGGAGGTGCCACCGTTAGAGACTGATGATGGCGATTACAATGACTATGAGGACCGAATAGATTATGACATGAACGCGTCAAATGTGGTCGGGTGTGACACGGATTTTGACATCCCTAGTAATGAAATTGAGGTAATATGTTTAACAAAAGAAGAGCAACTGAAAGAAATACTCGAGAGAAAGGACTCCTATAATTATATAAATTCATTTTATAAATGTGAGCATTGCTATAAAGGATTTATTCAAGATGGGACCTATAAGAACCATATGTTGCGGCATGATCCGTCCCACGGCAAAGAGACATGCCCCATCTGCAAAACAAGATGGCCGAACCTACGCTCACTGAAATCCCACACAACGACGGCTCACGAGCGGAAATACATCTGCAAATTATGTAACCACGTTTCTAAAAGCAGTCATAGGGCGAAGGAGCATTTAAAATGGCATAAGGGTCATAAATTTGTGTGTAAGGTCTGTGGAGCCATGTTCGCTAAGTCCACAAGTCATTTGACCCATCTGAGGTTACAGCATCCAACGAAGTTCTGTTGTGAAGTCTGTGGCGAGAGCTTTTTGGGAGAAATTGGGCTGAATATGCATATGAAGAAATCGCATAGAGGGAGCGAGAAAGTTAATTTAAAACCACAATTCAAATGCGCAGTTTGCGAACAATATTTTAAAAGTATGGAAGCCTTAAAACATCATTGCAATAGCTATGAAAATGGTATCTGTGATGGCAGTCTGTGCTCCTGTTTCCAGTGCGGTGACAACGTCCCGACACAGGATGCGCTCAGAGATCATTTGAAAACGCATGACGTCGGCGTCAAATGTGAGGAGTGCAACAGAAACTTTGCGCACGAGCGATCCTTCTCCATACATTATCAACGAGTACATCTGGGTATCAAGCTGAAACACTACAAGCCTCGGGACAAGAGGAAAAAGGTGCCCTGGGTCTGTGAGATGTGTGGCAAGAAGTGTATATCGAACGCTGCTTTGGTATATCACCAACGTACCCACACTGGAGAAAAACCGTTCCAATGCATCGAGTGTCCGAAGAAATTCAGCATATTTCAGAGATTACAGATACACGTGCGCACCCACACGGGCGAGAGACCGTTCAAGTGTTCGAGCTGCCCGAAGGCTTTCAAACATAAAGCTGCTCTTAACAGGCACGATCGGGTACATTCGGGAGCAAAGCCGTACCAATGCGGTCACTGTGGCAAAACATTTTCACAGTCAAATTCAATGAAACTCCACGTGAGGACAGTTCACCTGAAAATGCCGGCCCCTTACAGAGCTAGGAGAGGGAATAACGAATGTGATTTGatagaaaatgaaataagttga
Protein Sequence: MEDLLACRVCLATSVNLYDLYKYKLKNLFEIFSGIQVISELRKENCNRRIILHHDNASSHTAHRTKEISEVSPADNYPQYLCSYCSALLLKCDAFRERCRKSQELMKYAEMKSRFLTTSQIHSIAVSHHTALPFSVSTSESATISDIHIKTEEPVIDILFLKEEIDFSDEEPLANKVKKKEQDNGIEVEVPPLETDDGDYNDYEDRIDYDMNASNVVGCDTDFDIPSNEIEVICLTKEEQLKEILERKDSYNYINSFYKCEHCYKGFIQDGTYKNHMLRHDPSHGKETCPICKTRWPNLRSLKSHTTTAHERKYICKLCNHVSKSSHRAKEHLKWHKGHKFVCKVCGAMFAKSTSHLTHLRLQHPTKFCCEVCGESFLGEIGLNMHMKKSHRGSEKVNLKPQFKCAVCEQYFKSMEALKHHCNSYENGICDGSLCSCFQCGDNVPTQDALRDHLKTHDVGVKCEECNRNFAHERSFSIHYQRVHLGIKLKHYKPRDKRKKVPWVCEMCGKKCISNAALVYHQRTHTGEKPFQCIECPKKFSIFQRLQIHVRTHTGERPFKCSSCPKAFKHKAALNRHDRVHSGAKPYQCGHCGKTFSQSNSMKLHVRTVHLKMPAPYRARRGNNECDLIENEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01340526;
90% Identity: iTF_01526443;
80% Identity: -