Basic Information

Insect: Tiliacea aurago
Gene Symbol: -
Assembly: GCA_948098905.1
Location: OX402601.1:4631787-4646331[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 28 6.1 1.2 1 23 221 244 221 244 0.91

2 10 0.22 19 6.6 0.7 1 21 265 285 265 286 0.93

3 10 0.14 12 7.2 0.1 2 23 297 318 296 318 0.95

4 10 0.023 1.9 9.7 0.3 2 23 324 346 323 346 0.97

5 10 1.1e-05 0.00093 20.2 1.4 1 23 352 374 352 374 0.98

6 10 0.001 0.085 14.0 0.1 1 23 380 403 380 403 0.94

7 10 0.0014 0.12 13.6 3.6 1 23 412 434 412 434 0.99

8 10 0.00013 0.011 16.8 1.8 3 23 442 462 441 462 0.98

9 10 2.2e-05 0.0019 19.2 3.7 1 23 468 490 468 490 0.98

10 10 1.5e-05 0.0012 19.8 2.9 1 22 496 517 496 517 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	28	6.1	1.2	1	23	221	244	221	244	0.91
2	10	0.22	19	6.6	0.7	1	21	265	285	265	286	0.93
3	10	0.14	12	7.2	0.1	2	23	297	318	296	318	0.95
4	10	0.023	1.9	9.7	0.3	2	23	324	346	323	346	0.97
5	10	1.1e-05	0.00093	20.2	1.4	1	23	352	374	352	374	0.98
6	10	0.001	0.085	14.0	0.1	1	23	380	403	380	403	0.94
7	10	0.0014	0.12	13.6	3.6	1	23	412	434	412	434	0.99
8	10	0.00013	0.011	16.8	1.8	3	23	442	462	441	462	0.98
9	10	2.2e-05	0.0019	19.2	3.7	1	23	468	490	468	490	0.98
10	10	1.5e-05	0.0012	19.8	2.9	1	22	496	517	496	517	0.95

Sequence Information

Coding Sequence: ATGGAGAGAATATGCAGATTTTGTTTGAAAGTATCTATTAATAACATGTGCAGCTTACTAGAATGCGATGTACTTTATAGCATTCAAAAATTTCTAACGATAAAAATACCAACTGAAGATTCGTTCCCAAGCAATCTATGCAAGGAATGCTTTAATAAAATATCGCAAATCATTAAATTCTGTTTAACTGTTAAAGACAATGAAGATAAATTACAATATTATTCAAGAAATGACCTATTACAAGATTATTATTCAAAAATTACAAACAGTGTGCAAATTGAAGATGAACAAAAAGAGTTAAAAATTACAAACAATGTACAAATTGAAGATGAACAAAAAGAGTTAATAATAACAAACAATTTACAAATTAAAGATGAACCGAAAGAGTTAGAAATAGAAACACATTATGTGAAAATTGAAGTTGATACAGATTCAGACTTTAAGGATAACGATAATTTAATAAATGAAGAATTGTCTGATGATATTAACGAGACCCATTGCAGTTCTGATGATGAAATAACACTATCTTCAATTAAGAAAGAAAAGGAAATTGATAGCACTGCTCCATTAAAAAAGATAACAAAATTTAAACCTATAAAGAGTCTCATTCCTAAAAGGAGAAAGAAAAAAGAACCAGAAAACATTGAATACATCAAACCATTTACTTGTCTGTCATGTTTAATAGAATGTAATTCTCAAGCAGACCTCACTAAACATTACTATGCTGAACACTACAGGAAACAAACTGGTTGTAAAAATTATACTGAAAATAAATCGGAGGATAAGATTACATACAGCTGCAACAGTTGTGAGAAAACATGTAATTTGAAGAAAGATATTGTGGAACATATTATGAGTCAGACCCGTGAAATAGAAGAGAGACCGCTGATTTGTAAACTTTGTGCCAGAACATACCGGAGAGTACCTGATATAGTTCGACATGCTAGAGCACACAACGGCTTCAAACTGCAGTGCCCATACAACTGTGGGTTCACCACCGCTTACCAAGGAGCTATGAAAGAGCATAAGAATAGACACTTGGATGAATACAAGTATACCTGTCAGACATGCGGCAAGGGCTTCAACACAAAGACCTGGTATGAGCAACACCAGAACCTCCACACCGGACAGAAGCCGTTCGTCTGCAATATATGTGGCGTCGCCTTCCCTCTGTCCAGATATCTACAGACTCACAGTAGCTCGATGCATCCGCAATCGTCAAGCTTGAAACGGTACCAATGTGTCCATTGTGATGAAAAGTGTGACAGCTCCAAAAGTCTTGCTTTACATTTGCAGAAACATGGCATAATCAAAGAAACTCTTTGCGATTTTTGTGGAAAGACTATTACGTCTGCTTCTCAACTGCAATACCATCATAGGATGCATTTCGGAGTGAAGCCATACTCATGCCATATATGCAAAAAGAAATTTGCGAAGAAGTACAACGTGCAACTTCACATGACTATCCATACCGGTGAAAAGTCTCACACTTGCGTCCATTGCGGCAAGAAATACTCGCAGCGAAGCACGCTGCTGAGACATATTAAAAGGGTGGATAAACGGAATAACCCAGAATGTGGCGTAAACGTCGGCGACGACGGCGGCGGCGGCGCAGCTTGCAGCGGCGGCGTCAGGTCATCATCAGATCAGATAACTGTATTGTCATCGCCGCGGGACTATAGGTAG
Protein Sequence: MERICRFCLKVSINNMCSLLECDVLYSIQKFLTIKIPTEDSFPSNLCKECFNKISQIIKFCLTVKDNEDKLQYYSRNDLLQDYYSKITNSVQIEDEQKELKITNNVQIEDEQKELIITNNLQIKDEPKELEIETHYVKIEVDTDSDFKDNDNLINEELSDDINETHCSSDDEITLSSIKKEKEIDSTAPLKKITKFKPIKSLIPKRRKKKEPENIEYIKPFTCLSCLIECNSQADLTKHYYAEHYRKQTGCKNYTENKSEDKITYSCNSCEKTCNLKKDIVEHIMSQTREIEERPLICKLCARTYRRVPDIVRHARAHNGFKLQCPYNCGFTTAYQGAMKEHKNRHLDEYKYTCQTCGKGFNTKTWYEQHQNLHTGQKPFVCNICGVAFPLSRYLQTHSSSMHPQSSSLKRYQCVHCDEKCDSSKSLALHLQKHGIIKETLCDFCGKTITSASQLQYHHRMHFGVKPYSCHICKKKFAKKYNVQLHMTIHTGEKSHTCVHCGKKYSQRSTLLRHIKRVDKRNNPECGVNVGDDGGGGAACSGGVRSSSDQITVLSSPRDYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441448;
90% Identity: iTF_01441448;
80% Identity: -