Taur017835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea aurago
Gene Symbol
-
Assembly
GCA_948098905.1
Location
OX402603.1:15335432-15337306[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0087 0.74 11.0 0.5 2 23 300 322 299 322 0.95
2 10 0.014 1.2 10.4 4.0 1 23 328 350 328 350 0.99
3 10 0.32 27 6.1 2.9 1 23 356 379 356 379 0.95
4 10 0.00074 0.062 14.4 0.2 1 21 384 404 384 405 0.95
5 10 3.9e-05 0.0033 18.4 1.4 1 23 418 440 418 440 0.98
6 10 1.4e-06 0.00012 23.0 1.0 1 23 445 467 445 467 0.96
7 10 0.23 19 6.6 2.5 1 23 474 496 474 496 0.88
8 10 1.5e-06 0.00012 22.9 1.2 1 23 502 524 502 524 0.99
9 10 8e-05 0.0067 17.5 1.7 1 23 530 552 530 552 0.97
10 10 9.7e-06 0.00082 20.3 0.7 1 23 558 581 558 581 0.97

Sequence Information

Coding Sequence
ATGAATAACACAAAAGATGCAATGTACTGTCGCCTTTGCGCCGAGTTAAAACAACACAATGAACTCACAAACCTGCAAACTGACGAAGAAACGTGCCAGAAAGTCGTCAGTAAACTGTTAAGATTCAACATAATTATGGATTTTCAGAAAAATATACTGCCAAAGACTGTCTGCTTATTATGTGTACAATCCCTAGAACGAGCATTTGTTTTCGTAACTGCAGTTGAACAGGCGCAGGCATTTCTTAGTGACTTTATTCTTGTACAAATAAATACTGTTGCAAGTGATTCTTGTGATGAAAACATCTTGTATGAGCCTCCAGATAATAACAACAGTATTGCTGTCTTTAAAAACGAACACAGTCAAGATTCAATGGAAGTAAATGATGATTGTACAAATTTTAGTGAAAATTGTGATAGTGAGGTCATGATGGAAGTGTATAATGATTATTCTGTGATTAATGCAAACACTGAAGAACATATAATTGAGAATAAGCACAATAAACAACCTTCTAATGAAATGATTGAAGACAATACTTTCATAAAAGATGAATATGTTGAAACTCTTCATTTATACCATGTTGAAGATAATAATAACCTTGATTCTGAACCAATTCTGTTATACAATACAGTTTATTCTGCAGATATGATAAGGAATGAAAATTATAGTAAGGAGGGCACCAAAAATATGGATAAAAGTGTACAACAATTACAACCTCAAGAATGCAATTCCAAACAAATTCTACCCAAACGATTGGCTACTATAGTATATTCTAAAAGTAAAATAAATAAAACACAGAAAGCTAAAAATATAAAAATAAAGAATAGTAACATGTCCACCAAAAGTACAGACACAGATGTAGAACATACAAAAATGTCATGGAAAGATTATGAATGGAAGTGTTTTTATTGTGAAACACTATTCCCAAATATTCAAGAGCTACAGAAACATTTAATGCAGTACCACAACTCCTGTAACCCTTACCAATGCACTGACTGTGTAGTTAGAACCTCAAAGCTCAAACATTTTTTGAAACATGTTAGAAAACACAAAAATTACTTACGTTATTCTTGCTATAAATGCTTTAAGAAATTCCCTAAACTGTATCAAGCCGGGCAGCATAAAAAGAAAGTTCATGAAGACTCCGACTATGTATGCTCGGGATGCAACACTCCTTTTCACAGCAATGGAGAATTAAAGGAACATGTAAACAAATATTACAAACAATTATTAAGAAAAACACCAATTGATTTCACATGCAGTATATGCAATAAGAATACTGCAAGCACTAAAGATTTGAGAAAACATTTGCTTACTCACCAAAACAAGGAGTTTGTTTGTGAAACTTGTGGCAAATGTTTTGCTACTAAACCACAATTAAAAGAACACATGGTCCTACATAGTGCTGTAAAGATCATGCATCCCTGTGATATATGTAATGCTTCATTTTATCGAGTAACCCAATTAAAATGCCACAAAGGCATTCACACTGGACTCAAACCGTTTACCTGTGACAACTGTGGAAAAAGTTACCGTACAAAAGCTTATATTGCTAACCATATGAAAACTCACATGGACTCTTTCCTCTATCCTTGCACACTGTGCAATAAAAAATTTCGTGCTGCCCCCTATTTGAAACATCATATGCTTCAGCATACTGGAGAGAAACCATTTTCTTGTAACATTTGTCCGAGAGACTTTACAAACCTGGCCAATCGAAACAAACATATGAGAAATATACATGATATTGAGTTGGGAAGGAAGAGAAAGCCTATCATAAAACAGAAAACAGCTGATGGCCAGACTTCCTCTAACCTGGCTACCGGAGACACTAAATTTGCAGAACTCGACAAaatgttcaatcaatctgcctag
Protein Sequence
MNNTKDAMYCRLCAELKQHNELTNLQTDEETCQKVVSKLLRFNIIMDFQKNILPKTVCLLCVQSLERAFVFVTAVEQAQAFLSDFILVQINTVASDSCDENILYEPPDNNNSIAVFKNEHSQDSMEVNDDCTNFSENCDSEVMMEVYNDYSVINANTEEHIIENKHNKQPSNEMIEDNTFIKDEYVETLHLYHVEDNNNLDSEPILLYNTVYSADMIRNENYSKEGTKNMDKSVQQLQPQECNSKQILPKRLATIVYSKSKINKTQKAKNIKIKNSNMSTKSTDTDVEHTKMSWKDYEWKCFYCETLFPNIQELQKHLMQYHNSCNPYQCTDCVVRTSKLKHFLKHVRKHKNYLRYSCYKCFKKFPKLYQAGQHKKKVHEDSDYVCSGCNTPFHSNGELKEHVNKYYKQLLRKTPIDFTCSICNKNTASTKDLRKHLLTHQNKEFVCETCGKCFATKPQLKEHMVLHSAVKIMHPCDICNASFYRVTQLKCHKGIHTGLKPFTCDNCGKSYRTKAYIANHMKTHMDSFLYPCTLCNKKFRAAPYLKHHMLQHTGEKPFSCNICPRDFTNLANRNKHMRNIHDIELGRKRKPIIKQKTADGQTSSNLATGDTKFAELDKMFNQSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-