Basic Information

Insect: Tiliacea aurago
Gene Symbol: -
Assembly: GCA_948098905.1
Location: OX402604.1:8926499-8929082[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.14 12 7.2 0.9 1 23 52 74 52 74 0.95

2 15 0.002 0.17 13.1 0.4 2 23 146 168 145 168 0.94

3 15 0.00084 0.071 14.2 1.4 2 23 174 196 173 196 0.94

4 15 0.0053 0.45 11.7 0.8 1 23 201 224 201 224 0.96

5 15 0.23 19 6.6 0.1 2 23 227 249 226 249 0.92

6 15 0.036 3 9.1 2.2 2 21 256 275 255 276 0.93

7 15 0.0053 0.45 11.7 0.3 1 23 335 358 335 358 0.91

8 15 0.019 1.6 10.0 0.2 3 23 387 408 385 408 0.92

9 15 0.0086 0.72 11.1 0.4 2 23 431 454 430 454 0.95

10 15 0.00039 0.033 15.3 0.6 3 20 461 478 459 482 0.90

11 15 0.21 18 6.7 0.3 1 23 487 510 487 510 0.96

12 15 8e-05 0.0068 17.4 0.2 2 23 516 538 516 538 0.96

13 15 4.8e-05 0.004 18.1 4.8 1 23 542 565 542 565 0.97

14 15 0.0018 0.16 13.2 0.9 2 23 572 593 571 593 0.96

15 15 0.026 2.2 9.6 1.1 1 23 599 622 599 622 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.14	12	7.2	0.9	1	23	52	74	52	74	0.95
2	15	0.002	0.17	13.1	0.4	2	23	146	168	145	168	0.94
3	15	0.00084	0.071	14.2	1.4	2	23	174	196	173	196	0.94
4	15	0.0053	0.45	11.7	0.8	1	23	201	224	201	224	0.96
5	15	0.23	19	6.6	0.1	2	23	227	249	226	249	0.92
6	15	0.036	3	9.1	2.2	2	21	256	275	255	276	0.93
7	15	0.0053	0.45	11.7	0.3	1	23	335	358	335	358	0.91
8	15	0.019	1.6	10.0	0.2	3	23	387	408	385	408	0.92
9	15	0.0086	0.72	11.1	0.4	2	23	431	454	430	454	0.95
10	15	0.00039	0.033	15.3	0.6	3	20	461	478	459	482	0.90
11	15	0.21	18	6.7	0.3	1	23	487	510	487	510	0.96
12	15	8e-05	0.0068	17.4	0.2	2	23	516	538	516	538	0.96
13	15	4.8e-05	0.004	18.1	4.8	1	23	542	565	542	565	0.97
14	15	0.0018	0.16	13.2	0.9	2	23	572	593	571	593	0.96
15	15	0.026	2.2	9.6	1.1	1	23	599	622	599	622	0.95

Sequence Information

Coding Sequence: ATGGAGCCATTATTGAATTTCGAACTTTATTCCGACTATGGTAAAAAACCGAGGAAATACAAGGGCACAGAGTCTTCCTCGATGAGGAGGCGACGGAACCTTCAAATACTATTCAACAACACATCTATTATTCCTTTTAAATGGCGTGGAAAGTACCTGTGTTTCTATTGCAGCAAAGATATTGCCGAGTATACAGATTTAAGGAAACATACCAAAGAACATGGCAACTGTTCCATAAAAGACCATTCCCTTAAGGTCTTAAAAGGAGGACAGAATATGGAAATTAAAGTAGACATATCATTGATTACTTGCGAAGTTTGTGCGGAAACATTACCGTCATTCGACGAAGTCGTCACTCATTTGTTTGACAAACACGAACTTGAATACGATAGAGGAGTAGACATGGCTATAGAAGAGTATAAACTTGCTGATCTCAGTTGCACCGGATGCGATGAAAAGTTCACGTATTTCGGCTATCTAGTATCTCACGTCAATAATACCCACCCGAAAAATTGCCTCATTTGCGATGACTGCAACCAAAAATTCAACAAAAGGAGAGATCTATTTTCACACGTGAAAAATTACCATCGAGAAGGAGGGTACCAATGCGAAATGTGCCCTCAAATCTTCAACTCATTGAATATCCTAAGAAAACACCGAAATAACAGGCATTTGACTCGATGCAACATTTGCAATTTGAAACTGCCGTCAGCTGCTTTGAGACAAAAACATATCGACTTGGAACATCCGGACGACGGGTCTTTGCAATGTGATACCTGCTTCAAGGAGTTCCACACAAAACAGGGCTTAAAAATGCATTCAAGGAAATGTAAAGGAGAAGAGTTTTTCGGAATCGCCATCAAAGAAGAAAACGTGGCCATGGACTTAGATCTAAACTACGAGGATCAAGCCAAAAAACCTTGCGTCAAACAAATCAGAGAAAATATAGTTATAGTCATCAACATGTCTACGGCAATACCTTTTAATTTTTATAAGAATAAGTTCAATTGCTTTTACTGCTCCAAAGATTTTGCCGATTCTGATTTGATGAGGGAACACGCGGTTATGGAACACCCGGTGTGCGATGTTAAAGAAAAGTGTATTAGGAAATGTAGGGAGTCCGTGGCTTGCGTCAAAATTGATATTTCTTCACTCGCTTGCAAAGTCTGCTTTGAGTCATTGACAGACTTGGATCATTTGATCGATCACTTGATCGCGAAACACGATGCGAAATACGACAAATCGATAACAACGTGCTTACAACCCTACAGGTTGATTAAAGACAACATGGTATGTCCACACTGTCCCGGGGAGGTCTTCCGCTTCTTCGGAACGCTTCTTAAACATATGAATATCAAACATACCAACAACAATATAATTTGCGTTTACTGCGGCCAAACATTCCGTAGGGATCAAAACTTGCGAGTTCACATTTGGCGCCATCACAGAGCTGGGCGGTTCAAATGCAACATTTGTGCTGCTGAGTGCAATATTCCGTCTCGTTTATACATGCACATGGCTCGGGCACACGGTGTAAAAGCAGCTAAATGTCCCAAATGCCCCGAATCTTTCGCCACGCAATACGAAAGGCAGAAACATTTGATCATCGCCCACAATACGGGCCACAAATGCTCTTATTGTGGAAAACTCTTCACAAGAAACTCCTTTATGAGTAACCATATAAGAAGAACGCATATGAAAGAGAAGAGTATAGAATGTTCAGTCTGCTATACGAAGTTCTTTAACACTGTTCTGTTAAAAAGGCATATGGTGAAGCATAGCGGGCAGAAGAAATATAGCTGTGATGTGTGTGGGGAGCGGTTCTACTGGCGCAAGACTATGAAGACTCACAGAGAAAGGCTACATAGTAAACAGCTTTACCCCACACCCATGTAA
Protein Sequence: MEPLLNFELYSDYGKKPRKYKGTESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFYCSKDIAEYTDLRKHTKEHGNCSIKDHSLKVLKGGQNMEIKVDISLITCEVCAETLPSFDEVVTHLFDKHELEYDRGVDMAIEEYKLADLSCTGCDEKFTYFGYLVSHVNNTHPKNCLICDDCNQKFNKRRDLFSHVKNYHREGGYQCEMCPQIFNSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHIDLEHPDDGSLQCDTCFKEFHTKQGLKMHSRKCKGEEFFGIAIKEENVAMDLDLNYEDQAKKPCVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDLMREHAVMEHPVCDVKEKCIRKCRESVACVKIDISSLACKVCFESLTDLDHLIDHLIAKHDAKYDKSITTCLQPYRLIKDNMVCPHCPGEVFRFFGTLLKHMNIKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRAGRFKCNICAAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYERQKHLIIAHNTGHKCSYCGKLFTRNSFMSNHIRRTHMKEKSIECSVCYTKFFNTVLLKRHMVKHSGQKKYSCDVCGERFYWRKTMKTHRERLHSKQLYPTPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00906432;
90% Identity: iTF_00375619;
80% Identity: -