Basic Information

Gene Symbol
-
Assembly
GCA_948098905.1
Location
OX402599.1:22753427-22755113[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 9.9e-05 0.22 12.6 0.0 46 86 102 142 90 143 0.85
2 4 0.011 25 6.0 0.6 51 84 202 234 180 261 0.85
3 4 0.14 3.1e+02 2.5 0.1 50 83 292 324 279 326 0.78
4 4 0.021 45 5.2 0.0 49 83 387 420 364 424 0.87

Sequence Information

Coding Sequence
ATGGATATTAACAATCCCCACAACCAAAGTTATTGGTTTGTCCTCAGGGAAGATCAAAGCAATGTCATATTCAGTAGCAATAACTTCACCATCCAGAATCCACAAATTACAGGGCAGGAGGCGAGATATATTGTGGATACGGGAGACAACAGACAATATATACAAATTAACGAGACCCCGACAGCTGTCCAAGAAAATATTTCAGAAAATAGTGAAAAGGAGGTAATAAAGGCGAAAGATGATGACAACTTTTGGGATAGGAACAAAATAAAACTGTTACTAACATTGTGCTTGGATAACAGATTTAAAAATGTAACAAAAGACAAATCCCTTTGGGAAGAAATTGCTGTGCACTTGGGTACAAGTTCTGATGAATGTACTAAAAAATATAGAAACCTGAGGAGAACTTACATAAGACTCCTGAAAAAGAAAAGATTGGGCAAAGAGATCAAATGGGTTCACTACAACACCTGTGAGGAGGTATTCAAAGAATGTAAATCACTTCCACTGTCTGTGTTGGAGCCATGGGAGGAGCACAAAGTAAGAAGATTGCTCTGTCTCTACATAGAGAACTTAAATAAGTTCCGGAGTCCTGACTGCTTGCAAAAAGATGTTTGGAGGGAGATTGCATCACAGTTAGGGACAACAGAGTACAATTGTTACCATAAGTTCAAGAATTTAAAAAGAGCATACTTTAATTGGAAAGAAAAGAGTAGGGAAACTGGAAAACCAATCAAGTGGCAATATCATAATTATTTTGAAAGAATATTTTACAATTACAATCCGAGTATAGGTCCCTGGGACAAAAATAAAACTAGGTTGCTAATAGACGAGTACAAGCAAATAGCTGAAAAATTTAAAAATCCGAGATACCAAAAGAAAGAGTTGTGGAAAGAGATATCAGCATCAGTAGGGGAATGCCCCACAGACTGTGACAAAAAATTCAGGAATTTAAAACAAACTTACATTAGATTAAAAATGAGAGCAGATACAGGGAGATGTATAACAAAGTGGCGCTACTATGAAGATTTTGAAGGAATATACAGTGGACCAACTAGCTATCCACCTAAAATAACATACAAATTGCAAGAAGATGATTATGTCAAGCAGCTTTTAACATTTTATGTAGACAATAAGGAAAGATTTAGGGATCCTCTTGTCAAAAAGAAAAATGTATGGAGATTGTTGGCTCCAAAAATAGGCTTGTCTACAGAAGAATGTGATCGAAAATTCCGCAACTTGAAACAAACTTACATCAGACTTACTGAGAAAAAGAAAGAAACTGGAAAAATTAACAACTGGCCATATTATTCATATTTTGAAAAAATATTTGATGAACCCACAGGAACAGGTACATACAGCCATGGTGTTAAGTTAGATGACACAACACTAACTGAAATAAAGAGAGTGATGCAAGAAGTGCAGAACAAGAAAGACAATGACAAGTTTGAAAGTTTAGTGCAGGCTGTGGAAGAGTCGAACAACATACAGCGTGAACGAAATAGAATATTACAGGCATTGTTAGATAAAAAATGA
Protein Sequence
MDINNPHNQSYWFVLREDQSNVIFSSNNFTIQNPQITGQEARYIVDTGDNRQYIQINETPTAVQENISENSEKEVIKAKDDDNFWDRNKIKLLLTLCLDNRFKNVTKDKSLWEEIAVHLGTSSDECTKKYRNLRRTYIRLLKKKRLGKEIKWVHYNTCEEVFKECKSLPLSVLEPWEEHKVRRLLCLYIENLNKFRSPDCLQKDVWREIASQLGTTEYNCYHKFKNLKRAYFNWKEKSRETGKPIKWQYHNYFERIFYNYNPSIGPWDKNKTRLLIDEYKQIAEKFKNPRYQKKELWKEISASVGECPTDCDKKFRNLKQTYIRLKMRADTGRCITKWRYYEDFEGIYSGPTSYPPKITYKLQEDDYVKQLLTFYVDNKERFRDPLVKKKNVWRLLAPKIGLSTEECDRKFRNLKQTYIRLTEKKKETGKINNWPYYSYFEKIFDEPTGTGTYSHGVKLDDTTLTEIKRVMQEVQNKKDNDKFESLVQAVEESNNIQRERNRILQALLDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00973738;
90% Identity
iTF_01339743;
80% Identity
-