Tlin009878.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- pnr
- Assembly
- GCA_963932265.1
- Location
- OZ010685.1:19592594-19597016[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 4.5e-13 49.5 3.3 1 35 452 485 452 486 0.97 2 2 1e-17 4.6e-14 52.7 6.8 1 35 513 546 513 547 0.97
Sequence Information
- Coding Sequence
- ATGGAGAGCGTGTCGACGATGGCCCGCGGCGACGAGCAGCAGCGGGAGGAGGCGCACGAGGAGGCGCTGCAGCTGGTCAAGAACGAGGAGCGCGCGGCCGAGCTGGCGGCGGAGGGTGCTGGTGCGGGGGGTGTGGGGGGCGAGCCCGAGCCTGAGCAGCAGTCGGTGATCACGTCGCGGCGGGCGCTGCGCACGATCACGGCGGCGGGCCACATCACGGAGGACACGGGGGACGCGGGGGACGAGGGCGTGAAGGACGAGCCCCCGGAGCAGGCGCTGGAGCACGAGCAGTATGCGCGCGAGGAGCGGCAGTATGACGAGGAGCGGCTCCGGCACGCGGAGGCAGAGACGGCGCGCTACCTCGCCTTCAAGCAGGAGCCGTACCGCGGggggccgccgccgccgccgccgctgcaACAGGACAAGCGGGCGCAGGGGCAGTACGCGGTGGGGGTGGGGGTGGGGGTGGGGCGGGGGgcgccgccgcgcgcgccctACCGCGGCGGGCTGGCGCTGCGCTACGGGGCACCGCACCACGTGATCGTGACGCAGGAGGGCGAGGCGGACGAGCACGCGCAGGACGCGTTCCTGCAGAAGGAGAAGGAGCAGCTGCAGGTGTACGCGGGCGAGGACGGGCGCTACGGCGCCGCGCTGGCCGACCAGGTGGCCGCCTCCACCGCGCTCGAGATGATCCAGACCACGTCGCTCACCAACCAGCAGGCAGTCGGCGTGGCTTACCAGCAGGTGAAGTACGAGTCGCGCGGCGAGGGCGAGCCGCGGCCCACGACGTACGCCAGCCTGCAGCCCGTCACGTCGGTACACGGCGGGTACTACGCCAGCCAGAGCCCGCAGTACGGCGGCTCGTACCCCGCCTACCCCGGGAACAAGGAGCTGCTGACGCTGTACGGCGCGGGGGGTGCGGGCGGtgtggggggcgcggggggtgcTGGCGGCTCGGGGGGTGCGggcggcgcggggcgcggggacGAGTCGCCGCCGGGCCAGCTGCTGTACCGCAGCGACCCCACGCTGTCGTCGTCGTCGCTGAACGCGCGCGGCGCGCACGTGGTGTACGGCTCGGTGGTGCCGCAGTCGCAGGCGGTGTACGAGGCGCCGCCCAGTCCTAATTCACAGCAGGTGACGCTGTACACGCACGGCAACGCGGTGCAGTACAAGGTGGGCGGCGAGCACTACCTGGGCCAGGCGGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGGGCGGGCTGCTGGTGGAGAGCTACCCCGCGCAGCCCTGGCCGCCGCACAACCTGCTGCCGATCGACGACGGCTTCGACCCCAGCATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCCGCCACCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTGAACCGCCCGCCGCTCAAGGGGCAGAAGACGAAACCGCAGCAGGCGCTGCCGACGAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGGCGCAACAACAGCGGCGAGCCCGTGTGCAACGCCTGCGGACTCTACTACAAGCTGCACAACGTGAACCGGCCGCTTAGCATGAAGAAGGACGGCATCCAGACCAGGAAGCGCAAGCCCAAGAGCATGGGAGGAGGCCACGGCGGGGTGGCGCGCTCGGGCGGTGCAGGAGGCCTCACGGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGGGTCGATGAGCGGCGCGGGgtgcgcggggggcgcggggggcgcgccGCTGCTGCTGCTGCCCGCCAGACACCACTCCGACATcgtgacccccgaacgGGCCCAGACTCAACATAAGCCGTGTTGCACAACATAA
- Protein Sequence
- MESVSTMARGDEQQREEAHEEALQLVKNEERAAELAAEGAGAGGVGGEPEPEQQSVITSRRALRTITAAGHITEDTGDAGDEGVKDEPPEQALEHEQYAREERQYDEERLRHAEAETARYLAFKQEPYRGGPPPPPPLQQDKRAQGQYAVGVGVGVGRGAPPRAPYRGGLALRYGAPHHVIVTQEGEADEHAQDAFLQKEKEQLQVYAGEDGRYGAALADQVAASTALEMIQTTSLTNQQAVGVAYQQVKYESRGEGEPRPTTYASLQPVTSVHGGYYASQSPQYGGSYPAYPGNKELLTLYGAGGAGGVGGAGGAGGSGGAGGAGRGDESPPGQLLYRSDPTLSSSSLNARGAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNAVQYKVGGEHYLGQAGGVEYVPVSGYEGGLLVESYPAQPWPPHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKTKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNSGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARSGGAGGLTVEAHSHKVLPPLYAAVEGSMSGAGCAGGAGGAPLLLLPARHHSDIVTPERAQTQHKPCCTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438560;
- 90% Identity
- iTF_01438560;
- 80% Identity
- -