Tlin003344.2
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- ZNF131
- Assembly
- GCA_963932265.1
- Location
- OZ010681.1:12615233-12625134[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0004 0.037 15.4 5.0 2 21 166 185 165 186 0.94 2 25 1.2 1.1e+02 4.5 1.6 1 23 219 242 219 242 0.93 3 25 0.0016 0.15 13.5 5.0 2 23 248 269 247 269 0.95 4 25 0.24 23 6.6 3.0 2 21 273 292 272 293 0.92 5 25 0.0099 0.94 11.0 0.4 2 23 337 359 336 359 0.93 6 25 0.0054 0.51 11.8 0.8 1 23 392 414 392 414 0.98 7 25 0.00094 0.089 14.2 1.5 1 23 420 443 420 443 0.97 8 25 0.049 4.6 8.8 0.2 1 23 452 475 452 475 0.89 9 25 0.0013 0.13 13.7 1.4 1 23 487 509 487 509 0.98 10 25 0.0026 0.24 12.9 2.3 2 21 631 650 630 651 0.93 11 25 3.1 2.9e+02 3.1 1.4 1 23 682 705 682 705 0.90 12 25 0.026 2.4 9.7 2.3 1 23 710 732 710 732 0.92 13 25 1.2 1.1e+02 4.5 6.3 1 21 735 755 735 756 0.94 14 25 0.00021 0.02 16.3 1.2 1 23 772 795 772 795 0.95 15 25 0.0027 0.26 12.8 0.1 1 23 801 823 801 823 0.96 16 25 0.092 8.7 8.0 0.4 1 23 857 880 857 880 0.94 17 25 1.9e-05 0.0018 19.5 0.5 2 21 998 1017 997 1018 0.95 18 25 0.003 0.29 12.6 0.1 2 23 1052 1074 1051 1074 0.95 19 25 1.9e-05 0.0018 19.6 0.3 2 23 1080 1101 1079 1101 0.96 20 25 0.47 45 5.7 1.6 2 21 1105 1124 1105 1125 0.92 21 25 0.0006 0.057 14.8 0.5 1 23 1151 1174 1151 1174 0.95 22 25 0.0016 0.15 13.5 0.4 1 23 1180 1202 1180 1202 0.92 23 25 0.12 12 7.6 0.1 1 23 1208 1230 1208 1230 0.97 24 25 0.0065 0.61 11.6 0.3 1 23 1236 1259 1236 1259 0.94 25 25 1.2 1.1e+02 4.4 3.6 2 23 1266 1288 1265 1288 0.92
Sequence Information
- Coding Sequence
- atgacaCGAGAAGTTAATATCAAGGCCCTAGTGTCGCACGTAGTAAAAGGAGATGGAATTCACAAATGTAGAATTTGTATGGGAGATACCTCTGAAGGACAGGTCTATTTGGGTGATACAGTGATGATGGATGGTGATAAACCTATAACTCTATCGGAATTGCTCGAAGTAATAACCGGAGTTGAGGTGCAGCTGGAGGACGACATGCCAGCTGGACTGTGCACCGCCTGTTCCACGTCAGCTCTGAATGCAGCTCACTTTCGAACATTTTGCAGACAGGCCTTGGAACAATGGGAGACAATGCTGATGCTCCTGGCAAATTTACGCTCCTCATCTGTGAAGGCCAATAAAGCTGTACTTGTTATACTCGGCCAGAATAAAATGACTATAGTTGACAGATCTCCCCCACAGGAAAAGAGGTCAGATACCGAGAAAGTGGAATCACTAGTCTGGTCTAAGTCATTGAAAAGAGAAAAGCGAACAGTAAAAGGGTGCCAATGTTCTGACTgtggaaaaaaatttaaatatccaCAACATTTGCATCAACACTTAAAAGAGTCCACCGATTTTAAACGTGCATGCTATATATGTGCCAAAATTATGTCTAGGGACGACTTAATATCGCACTTGAAAGATGAGCATGGTAGAAAGCCTTATGACTGCAAGAAATGCCCAGCGTTGTTACATTCCTATAGTCAGTTCAAACGACATGTAGTAAAAGCACATTCTAAAGGTTCCTGTTTTTGCGGAGATTGCGGGCGGAGTTTCAAATCTCCGCACGCTTTTCATGCTCACCGGTCGGTCCACAGGCTCAAGACATGTCCAAGATGCGACAAACTATTCCGCAATCAAACTTGCTATTTGTATCACGTAAAAAAGTGTTGTAACCTTGACAGTAACAGACAGGATACGCATCGCACAAAGCACAAAGTCTTCGTGGAAGTTGAAAATCGTGTTAGCGACAAAAAAATCAAAGTTGGACTTCGCGGTAGCACAGACAAGCAGTGCATTTGTGACTATTGCGGAAAGAAATTCGCCGGGAAGAAGTTCGTGGGTGCTCACATTCAGATCGTTCATATGAaaaacactcataaaccatgcaTTTACTGTGGGAAGCTTCTAGCCGCTGCTCACATGACTGAGCATGTAAAGACCCACGAAATGGTGAGAATTTTCACCTGTGAACATTGCGGCATCATTTTGAGGACAAAACTTGGATACATTCAGCATTTGCGGTTACACACTGGAGAGAAACCGTATAAATGTCAGTATTGTGGAGAAACGTTCTCTGCTTCGTCGCGAAAATCAGAACACATCAGGAAGAATCACAAGTCTTCAGAAATCGAATTGAAACACGCTTGCGAACTCTGCCCTGCTCGATTTCGTCTTCCTTATAGATTAAAAAAGCATGTTGCAGCTATCCATAATACAGAGCCAGAGGATACAATGCAGTTACTTTTTGAATGTGAGGATTGTAGCGAGAAATTCGCCTCGTATAGAGGCTTGTTGCACCATGGTAGAAAACATCAGACTCAGTTTCAAATGAATCGAAATGTCAAAAAGCTCACTAAATTTCAAGTATGGGAGGAGGCTGAGATGCCGCGAGGAACATGCCGCGAATGTTATCAGACAGCTGTCGCAGCCGTCCACTTCAGGCGGCTGGTCTGGGAGTCGGCTCGACAGTGGTCCGCTGCAGTAACCACACTCTCCAACATCCCAAATCCTACTAATGATGGAGCATACTATATTTACTATGGCGAAACCACCACTATGATACAGGACCCCGAAAAAAATATCAGTAATGTCTCACAAGCTGCCAAGAGACTTAATTGTGCAACTAACCGGAAAATAAGAAAACTTCGAAGGAAGTACAAAAACGCGTCTGTGATAAAGTGTCGCGATTGTCACCTGAAGTTTCCAACGCCGTATCACTTGAACCAACATTTCAAGAGCTCTATGCTCCGCGTTTGTACCGATTGCTGTTTAATAATGCGAAAAGAGAAACTAGCAAAGCATTTGCTTAAGGCACACAATAAAAAAGTTTTCCCGTGTAACTTGTGTCATCAGCTATTTGACGAGTCGAAAGCTGTAGACCGCCACGTGCATTTGCTTCACGGGCCTAACTCACATCAATGTAAAGTTTGCGGAGCTGGGTTTTTTAATGCTAGAGCACTTCGAGCACACTGTTACACTCACACATTGTTTAGTTGTTCCTTTTGTAATGCGAGCTTTGAAAATCGTAAATGCTACAAACATCACAAAAATCAATGTAATAAAAAGAGTACGGATGGACCAAAACATCAACCTGAAATGTATGAATGTCACGACTGTGGGAGTACGTATACAAAGAAACCGTCTCTGAGGATTCATATTATCCAGAAACATTTAAATGTTCTTCCATTCGTTTGTCAAGTTTGTGGGAAACGCAGTTCCAACGCGGGTCACGCTAAGGCACATGCCGCTATACATATGACCGAAAGGAAGATATATCAATGTTACTGTGGAGCAAAAATGCGAACGCAAATAGGTTATCACATGCATCAGAGGATCCATACTGGGGAGAAACCTTATCAGTGCAGTGATTGTGGGGATAGGTTCATTTCGGCGTCGAGAAGGCTAGATCATGTGATGAGAAGACACAGAAGTACTAAGGACATGAAACACGCCTGCAAAgTTAAAGAAGAAACATCATTTCCACGAGGATTGTGCGCTGAGTGCACCTCTGCGGCAGTCTCCGCCTTTGAGTTTAAAGTCTTCGTTCAGAAATCTCATGTACTCTGGACTACTTGCATTAACACCCTATCGGTACTGCCTAAGACTCAGAACTCTAAGTCCTTATACGCCATCGTCGGGGAAGACTTGTCGCTCCAAACTGTTGCCGATTTTAACGGAGACGCCAAAGTTTTACTAGGTCTacttctaaataaattaaagaaaaggCAAAGAACTGAAACGAAGGTCAAGGGCAAAGGACGCTCTGGTCCGCCCAGCAAGTGTACAGATTGTGGAAAATTCTTTAGTAGCCCGTACTACCTAAACTTGCACTTGAAAAACAGTGGCCAAAAGGAAGCGTGTTGGTTTTGCGGGATGGTGCTTTTGAGGGGTAAAGAAATGAAAGATCACCTGTTGAAAAAGCACAATTTAGAGGTTCTCTCTTGTCCTGATTGCCCGAAACTTTTTACTGAGGAATTAGACCTGAAGTTACACATAAAAAACAGTCACAAACCTGGAGCTTTGACTTGTGTCGACTGCGGGAGGACATTTCCAAGGCAATCATCGTTTGAAGCGCATTCCCAAATGCACGCGGTAAGAACTTGTCGCGCTTGTGGAACCCAGTTCACCAGCCGTGGATGTTACAGAGAACATCGAAAGGTATGTGAGCCAGGAGCAAAGCCAGACATAAAAATGATACCTCCGAGCAAGCGATCGAATGTCAGAGACCCGTCGACATATACTTGCGATTACTGCTTAAAGACATATCAATCACGACCTCAGCTGAAGAATCATATAATATGGATTCACATGGACGTCCGCCCACACCAGTGTCAGTGGTGTGGAAAGAGGTTCTACACGCCGGCTCGGCTAGCAGAACATTCGGTGGTACATACCAGAGAGAGGAACTTCGAATGTGACATTTGTGGAGCAAAGTTAGTTTCCAAAATGGCTGCCGTGTACCATAGACGTAGACATACCGGGGAGAGACCGTATGAATGCGAGGACTGTGGAGAAAAGTTCATATCTGCTTCTCGGAGATCCGAACACGCGAAACGTAGACATGGAAAGGGTTTACGTATGCAATGCATACATTGTCACGCTAATTTCGTAAGAGGGCATGAACTACGAAAGCATGTAGAGAAAGCTCACAGTTAG
- Protein Sequence
- MTREVNIKALVSHVVKGDGIHKCRICMGDTSEGQVYLGDTVMMDGDKPITLSELLEVITGVEVQLEDDMPAGLCTACSTSALNAAHFRTFCRQALEQWETMLMLLANLRSSSVKANKAVLVILGQNKMTIVDRSPPQEKRSDTEKVESLVWSKSLKREKRTVKGCQCSDCGKKFKYPQHLHQHLKESTDFKRACYICAKIMSRDDLISHLKDEHGRKPYDCKKCPALLHSYSQFKRHVVKAHSKGSCFCGDCGRSFKSPHAFHAHRSVHRLKTCPRCDKLFRNQTCYLYHVKKCCNLDSNRQDTHRTKHKVFVEVENRVSDKKIKVGLRGSTDKQCICDYCGKKFAGKKFVGAHIQIVHMKNTHKPCIYCGKLLAAAHMTEHVKTHEMVRIFTCEHCGIILRTKLGYIQHLRLHTGEKPYKCQYCGETFSASSRKSEHIRKNHKSSEIELKHACELCPARFRLPYRLKKHVAAIHNTEPEDTMQLLFECEDCSEKFASYRGLLHHGRKHQTQFQMNRNVKKLTKFQVWEEAEMPRGTCRECYQTAVAAVHFRRLVWESARQWSAAVTTLSNIPNPTNDGAYYIYYGETTTMIQDPEKNISNVSQAAKRLNCATNRKIRKLRRKYKNASVIKCRDCHLKFPTPYHLNQHFKSSMLRVCTDCCLIMRKEKLAKHLLKAHNKKVFPCNLCHQLFDESKAVDRHVHLLHGPNSHQCKVCGAGFFNARALRAHCYTHTLFSCSFCNASFENRKCYKHHKNQCNKKSTDGPKHQPEMYECHDCGSTYTKKPSLRIHIIQKHLNVLPFVCQVCGKRSSNAGHAKAHAAIHMTERKIYQCYCGAKMRTQIGYHMHQRIHTGEKPYQCSDCGDRFISASRRLDHVMRRHRSTKDMKHACKVKEETSFPRGLCAECTSAAVSAFEFKVFVQKSHVLWTTCINTLSVLPKTQNSKSLYAIVGEDLSLQTVADFNGDAKVLLGLLLNKLKKRQRTETKVKGKGRSGPPSKCTDCGKFFSSPYYLNLHLKNSGQKEACWFCGMVLLRGKEMKDHLLKKHNLEVLSCPDCPKLFTEELDLKLHIKNSHKPGALTCVDCGRTFPRQSSFEAHSQMHAVRTCRACGTQFTSRGCYREHRKVCEPGAKPDIKMIPPSKRSNVRDPSTYTCDYCLKTYQSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHSVVHTRERNFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGEKFISASRRSEHAKRRHGKGLRMQCIHCHANFVRGHELRKHVEKAHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438240;
- 90% Identity
- iTF_01438240;
- 80% Identity
- -