Basic Information

Insect: Thymelicus lineola
Gene Symbol: -
Assembly: GCA_963932265.1
Location: OZ010681.1:16298495-16305357[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.049 4.6 8.8 1.9 1 21 75 95 75 96 0.96

2 33 7 6.6e+02 2.0 0.0 3 23 125 145 123 145 0.88

3 33 0.57 54 5.5 0.7 2 23 168 189 167 189 0.96

4 33 0.025 2.3 9.8 0.1 1 23 193 215 193 215 0.95

5 33 0.076 7.2 8.2 0.4 1 15 220 234 220 243 0.78

6 33 0.0059 0.56 11.7 0.3 1 23 249 272 249 272 0.95

7 33 0.00045 0.042 15.2 0.9 1 23 279 302 279 302 0.98

8 33 0.0012 0.11 13.9 2.5 1 23 309 331 309 331 0.98

9 33 2.4e-06 0.00023 22.4 0.8 1 23 337 359 337 359 0.97

10 33 6.6e-05 0.0062 17.9 0.3 2 23 363 385 362 385 0.96

11 33 0.16 15 7.2 2.9 1 23 476 498 476 498 0.96

12 33 0.0036 0.34 12.4 0.3 2 23 525 547 524 547 0.95

13 33 1 95 4.7 1.8 1 23 569 591 569 591 0.98

14 33 2.8e-05 0.0026 19.0 0.4 1 23 595 617 595 617 0.98

15 33 0.045 4.2 8.9 0.2 1 23 622 645 622 645 0.93

16 33 0.023 2.2 9.8 0.6 1 23 651 674 651 674 0.93

17 33 0.71 67 5.2 0.1 1 23 741 763 741 763 0.92

18 33 1.3 1.2e+02 4.3 0.1 3 23 789 810 788 810 0.95

19 33 0.0096 0.91 11.0 2.2 1 23 832 854 832 854 0.98

20 33 0.015 1.4 10.4 6.8 1 21 858 878 858 880 0.95

21 33 0.0026 0.25 12.8 0.2 1 23 885 908 885 908 0.93

22 33 0.0019 0.18 13.2 0.4 1 23 914 937 914 937 0.95

23 33 0.2 19 6.9 0.3 1 23 943 966 943 966 0.97

24 33 0.017 1.6 10.3 0.1 1 23 1013 1035 1013 1035 0.93

25 33 3 2.8e+02 3.2 0.1 2 23 1059 1081 1058 1081 0.95

26 33 0.047 4.5 8.9 2.6 3 23 1105 1125 1103 1125 0.96

27 33 0.02 1.9 10.1 3.8 3 23 1131 1151 1130 1151 0.97

28 33 0.055 5.1 8.7 2.1 1 20 1157 1176 1157 1180 0.88

29 33 0.00046 0.044 15.2 1.1 1 23 1186 1209 1186 1209 0.93

30 33 0.17 16 7.1 2.7 1 23 1215 1238 1215 1238 0.96

31 33 0.00023 0.022 16.1 0.4 1 23 1244 1266 1244 1266 0.95

32 33 1.1e-05 0.0011 20.3 0.6 1 23 1272 1294 1272 1294 0.99

33 33 0.0004 0.038 15.4 4.8 1 23 1300 1322 1300 1323 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.049	4.6	8.8	1.9	1	21	75	95	75	96	0.96
2	33	7	6.6e+02	2.0	0.0	3	23	125	145	123	145	0.88
3	33	0.57	54	5.5	0.7	2	23	168	189	167	189	0.96
4	33	0.025	2.3	9.8	0.1	1	23	193	215	193	215	0.95
5	33	0.076	7.2	8.2	0.4	1	15	220	234	220	243	0.78
6	33	0.0059	0.56	11.7	0.3	1	23	249	272	249	272	0.95
7	33	0.00045	0.042	15.2	0.9	1	23	279	302	279	302	0.98
8	33	0.0012	0.11	13.9	2.5	1	23	309	331	309	331	0.98
9	33	2.4e-06	0.00023	22.4	0.8	1	23	337	359	337	359	0.97
10	33	6.6e-05	0.0062	17.9	0.3	2	23	363	385	362	385	0.96
11	33	0.16	15	7.2	2.9	1	23	476	498	476	498	0.96
12	33	0.0036	0.34	12.4	0.3	2	23	525	547	524	547	0.95
13	33	1	95	4.7	1.8	1	23	569	591	569	591	0.98
14	33	2.8e-05	0.0026	19.0	0.4	1	23	595	617	595	617	0.98
15	33	0.045	4.2	8.9	0.2	1	23	622	645	622	645	0.93
16	33	0.023	2.2	9.8	0.6	1	23	651	674	651	674	0.93
17	33	0.71	67	5.2	0.1	1	23	741	763	741	763	0.92
18	33	1.3	1.2e+02	4.3	0.1	3	23	789	810	788	810	0.95
19	33	0.0096	0.91	11.0	2.2	1	23	832	854	832	854	0.98
20	33	0.015	1.4	10.4	6.8	1	21	858	878	858	880	0.95
21	33	0.0026	0.25	12.8	0.2	1	23	885	908	885	908	0.93
22	33	0.0019	0.18	13.2	0.4	1	23	914	937	914	937	0.95
23	33	0.2	19	6.9	0.3	1	23	943	966	943	966	0.97
24	33	0.017	1.6	10.3	0.1	1	23	1013	1035	1013	1035	0.93
25	33	3	2.8e+02	3.2	0.1	2	23	1059	1081	1058	1081	0.95
26	33	0.047	4.5	8.9	2.6	3	23	1105	1125	1103	1125	0.96
27	33	0.02	1.9	10.1	3.8	3	23	1131	1151	1130	1151	0.97
28	33	0.055	5.1	8.7	2.1	1	20	1157	1176	1157	1180	0.88
29	33	0.00046	0.044	15.2	1.1	1	23	1186	1209	1186	1209	0.93
30	33	0.17	16	7.1	2.7	1	23	1215	1238	1215	1238	0.96
31	33	0.00023	0.022	16.1	0.4	1	23	1244	1266	1244	1266	0.95
32	33	1.1e-05	0.0011	20.3	0.6	1	23	1272	1294	1272	1294	0.99
33	33	0.0004	0.038	15.4	4.8	1	23	1300	1322	1300	1323	0.96

Sequence Information

Coding Sequence: ATGATCCATAATATACAAACCGTTGgaGCCAGCACACAAAACGAGCCTGAAACTGCGCTTGTGACTAAGAAAAACATCTTTGTGTTTGAAGAGTCGCATGGGACAGAAAAGCGGCCCTATCGAAGAAGTGCCAGAGCGGAGGCTAGGTTCGTCACTAAGAAAAACGCCCATGCCATTTTAGAGTGCTGGTCGGTTTGTCCATTCCGATGGAAAAAGAATAGATTCAAATGCGCTTATTGTGAAGATGACTTCACTGACTGTTCTGATTTGAGGGACCACGTCAGACATTGTTCTACAGAACATAGCGTTAAGGACATATACAGCAAATTCAAGGAGATGACTCTGATCAATGTCGATATCACCGCTACTATATGTAAACTTTGCGCCTTACCTTTTTCTACTGTTAGCGAAATGGGAGAGCATGTTGTCGAGCACGGTTTCGATTTCGATTCGGCTCATCCAGACGGGGTACTGCCATTCGCGTTAGACAAGGAATCTTGGCGCTGCGTCATTTGTCAGGACAAGTTTAACAACTTTCTCAAATTGTATGAGCACATGAACAGTCACTATCAACATTATATTTGCGCGACATGCGGCAAGGGATACATGACAGCACCAAGGTTGAGGAAACATTCCGAGGTCCACATAAGTGGTTCATTTCCCTGTGATAAATGCGGGAAGAATTTCACGATGCGCGCAGCGAGAGATTATCACAAAGTTTCCGCTCACGCCAAGGGTCCAAGATATGAGTGTCCTCAATGTGACATGCGATTTACGGGCTACTACGAGAGAATGAACCATTTGAATGAAGCTCACAGGGAGAAAGAAGTGATTTACAGTTGTACGTATTGCGAGCAAACCTTCAAAACGAGCGGTAAACGAGCGATTCACGTGCGAACGGTCCATTTCCCTCAGCAACGAAGTTTTCCCTGCCATTTCTGCAACTCTCAATTTAAAGCTGCATACGAGCTTAAACGGCATATGATCAAACATACCGGCGAAAGGAACTTTGCGTGTACGGTGTGCGAGAAAACGTTTCCACGGAGCAAAGCTTTGAGAAATCACTTGAAAACCCACGGTGATCTTAGTTGCAAATGGTGCGGTTTGATGTTCAAGCAAGAGGCGAGATTGTCGGCTCATATGAGAACGAATCATGTAGAATACAACAATCTGGTCGAAAATTCTGATACGATTTTAGGTTCTGCTAGTGCACATGACGAAGGACaactaaatacaaataaacgaGTTAGAAAGATAAAGGAGATAGTAAGTGCGCGCCAAATGCGTCGACGCAGGAAAGCCAATAATGCCGATTGGAAACCAGAAGAATCTGAGAAGCGAATCGATAAAACAATGATGCGTAGAAACGCCAtgacatttttagaaaattccaCAGCATGGGCCTTTCGTTGGTGTCATAACTCGTTTTATTGCTCCTACTGTGATAATAAGTTTGTAGAACCACATGTCTTGCGCGAGCATGTATCGCATCATTTATCCGAACCCCCAACAAAACGTGTATTCTCCAAATTAACTGAGAATAATATGATCAAAATAGATATATCTGATTTAAACTGTCGATTATGTGGTTATCGTTTTAACAGTATAGATGGTTTGAAAGATCATTTAACGACGATACATGAGAAGATCTTTTACGATGATTACAGCGATGGTGTTCTCCCTTTTAAGCTAGATTCAAACGGTTATCAGTGTCAAAAATGCTTTATACATATCGCAAGCTTCGCAAAAATGAATGGGCATATGAATACTCATTATCAAAATTACATTTGTGACGCTTGCGGTAAAGTGTTCGCATCAAAATCAAGGTTCAGAAATCATATACAATCCCACGAGACTGGTAGATTCCCCTGTCGGGATTGCGGTGAAATTTTTGATACAAGGGGCGGTCGTAGCAGTCATAAACTACGCGTTCATAAAAAAGGCATTCGATACGCATGCCCACACTGTCCACAGTTATTCACAACTTACTATGCAAGGGCTAAGCATTTGGTAAGCGATCACTCATCTCAAAATGTCACAAATTTGGGCAATGCATGCGGGAAGTCCATTGAGTCTAgatGCGCGGACGACAAAGCACAAGAAAATAAGACTGTACAGATAAAATGGAAAAAGAAAAGGAGGGTGATGGGTGAAAAAGCGAACGCTGCTTTTATTTTGGAACACTCTAACGCGGTTGCTTTTAGATGGATGCGCGGGAAGTTTATGTGTGCATATTGTCCGCAAGTATATCCAAACATTAACGAAATCCGTCTCCATTCCGTCACACATGCTAAGATGGAGCTGTTTGAAAAGCCAGAAGTCCGGAACTCGTTTCCCCTGAAGGTCGATATAACTGATCTACTATGTTCCATTTGCCAAGGAGCAGTCGAAAATTTGATCGAGCTCAAGAAACATTTACAGGAGAAGCATTCGAAAACTACCAATGAAGAGTACAGCGATGGAGTAGTACCCTTCATATTGACTAGCAAAATTTTCAGATGCGTGCATTGCGGTGTACACTTCGAAGGTTTTATGAGCCTGTTTATTCACATGAACGTGCATTATCAAAGCTTTGTGTGCCATACGTGCGGAAAGAGTTACTCTGGTGAACATAAGCTGAGATCCCATCAGAAATGCCACGAGGTCGGACAGTTCCCGTGCCCTAAATGTGAAATGGTGTTTAAAAATCGTGTCTTAAAGAATCGTCATTTAGCTTTAGTTCACGGTCCCAAGAAAAGATACCGGTGTCCCATCTGTGATTTGACTTTTGATTCGTACCACGCAAGGCTGAAGCATCTTGCGGTGGTGCATGGACAGAAAGCCGAATATCGCTGTAGTTTATGCCCCTCAGTGTTTGGTAGTGGAACGTCGAGGTACTCTCATATGCGGATAGTTCATAagaaacaaaAGCCTGATCAGACCACTAAGTGGATATGGAAGTCGACAAGGCGACGCAAGTATGACGATCAAAGAGATAATGCTGCAATTATATTAGAGTTTTCGAACGCACTTCCCTTTAGGTGGAAACGAGGGACTTTTACCTGCGCGATCTGTCCACAGTCGTTCGGAGACTTTGCAGGTCTCCAAACTCACTCGGCTGAGCATCCTAATAAAATGGAAGCTATGCGACAAGCCAGGCCCTGTGACAACGTTAAAATAGAAATTAGCAACCTCCGCTGTGAGATATGCCTCCAGAGCATGAAAAGTCTAGACGCTATCAGAGATCATTTGATAACAGAACACGCAAAGCCAATCATAAAAGATCAGGGCATCGGTGTCACTCctttttacttaaataataaggAAATGATTTGTACCCACTGCGATGAAAAATTTGACCTATTCACGAGGCTAAATACGCACATGAACCAACACTATCCAAATAACATTTGCTGTCATTGCGGCAAAGCATTTGTAGCAGCTCATAGACTTAAATCACACCAACTTATCCATGAATTAACCAACCATCATAAATGCACTAAATGTGATCAGGTCTTCGAGACGAGAACGCTCAGAAACAACCATTTTGTCTTAGTTCACGGCCCCTTATGTAGATATAGATGTCCATATTGTAATGAATCGTTTAAAAGCTACTCGGATAGAGGGAGGCATTTGTCGGAGTCCCATGGGAAGAAAATTGAATACCCTTGTCATTTGTGCTCTGCTGTTTTTGCTATGTGCAATCAAAGGACCAAGCATATTAAACAAGTCCATATTAAGCATAAGACATTTCTCTGTGAATTTTGTCCCTACAAGTTTGTTACCGCAGCTCAATTGAGAAGCCATATGGTTAAACATGTAGGGGAGAGAAAGTTCCAGTGCGAGGTTTGCAAGAAAGCGTATGCAAGGGTCAAGACGCTTAAAGAGCACATGCGGATACATAACAATGATAAGAGATTTGTTTGCGAGTATTGTAATAATGCCTATGTTCAGAAATGTAGTCTGCAAAGTCACATGAAGACGCACCATTCCAACGCAGAACctttgaagaaaataaaattaaccagTTATCGTTAA
Protein Sequence: MIHNIQTVGASTQNEPETALVTKKNIFVFEESHGTEKRPYRRSARAEARFVTKKNAHAILECWSVCPFRWKKNRFKCAYCEDDFTDCSDLRDHVRHCSTEHSVKDIYSKFKEMTLINVDITATICKLCALPFSTVSEMGEHVVEHGFDFDSAHPDGVLPFALDKESWRCVICQDKFNNFLKLYEHMNSHYQHYICATCGKGYMTAPRLRKHSEVHISGSFPCDKCGKNFTMRAARDYHKVSAHAKGPRYECPQCDMRFTGYYERMNHLNEAHREKEVIYSCTYCEQTFKTSGKRAIHVRTVHFPQQRSFPCHFCNSQFKAAYELKRHMIKHTGERNFACTVCEKTFPRSKALRNHLKTHGDLSCKWCGLMFKQEARLSAHMRTNHVEYNNLVENSDTILGSASAHDEGQLNTNKRVRKIKEIVSARQMRRRRKANNADWKPEESEKRIDKTMMRRNAMTFLENSTAWAFRWCHNSFYCSYCDNKFVEPHVLREHVSHHLSEPPTKRVFSKLTENNMIKIDISDLNCRLCGYRFNSIDGLKDHLTTIHEKIFYDDYSDGVLPFKLDSNGYQCQKCFIHIASFAKMNGHMNTHYQNYICDACGKVFASKSRFRNHIQSHETGRFPCRDCGEIFDTRGGRSSHKLRVHKKGIRYACPHCPQLFTTYYARAKHLVSDHSSQNVTNLGNACGKSIESRCADDKAQENKTVQIKWKKKRRVMGEKANAAFILEHSNAVAFRWMRGKFMCAYCPQVYPNINEIRLHSVTHAKMELFEKPEVRNSFPLKVDITDLLCSICQGAVENLIELKKHLQEKHSKTTNEEYSDGVVPFILTSKIFRCVHCGVHFEGFMSLFIHMNVHYQSFVCHTCGKSYSGEHKLRSHQKCHEVGQFPCPKCEMVFKNRVLKNRHLALVHGPKKRYRCPICDLTFDSYHARLKHLAVVHGQKAEYRCSLCPSVFGSGTSRYSHMRIVHKKQKPDQTTKWIWKSTRRRKYDDQRDNAAIILEFSNALPFRWKRGTFTCAICPQSFGDFAGLQTHSAEHPNKMEAMRQARPCDNVKIEISNLRCEICLQSMKSLDAIRDHLITEHAKPIIKDQGIGVTPFYLNNKEMICTHCDEKFDLFTRLNTHMNQHYPNNICCHCGKAFVAAHRLKSHQLIHELTNHHKCTKCDQVFETRTLRNNHFVLVHGPLCRYRCPYCNESFKSYSDRGRHLSESHGKKIEYPCHLCSAVFAMCNQRTKHIKQVHIKHKTFLCEFCPYKFVTAAQLRSHMVKHVGERKFQCEVCKKAYARVKTLKEHMRIHNNDKRFVCEYCNNAYVQKCSLQSHMKTHHSNAEPLKKIKLTSYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -