Tlin003349.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- -
- Assembly
- GCA_963932265.1
- Location
- OZ010681.1:12659048-12688312[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.7e-12 2.3e-09 38.0 2.3 1 44 21 64 21 64 0.97 2 8 0.0093 13 6.9 0.0 17 44 120 146 111 146 0.88 3 8 5e-14 6.8e-11 43.0 2.9 2 44 177 219 176 219 0.96 4 8 8.4e-08 0.00011 23.0 0.1 1 44 243 286 243 286 0.97 5 8 3.9e-07 0.00053 20.9 0.1 10 44 482 514 478 514 0.88 6 8 0.088 1.2e+02 3.8 0.0 17 44 700 726 691 726 0.86 7 8 0.00054 0.73 10.9 5.9 5 44 750 787 746 787 0.81 8 8 1e-05 0.014 16.3 0.1 10 44 836 868 832 868 0.87
Sequence Information
- Coding Sequence
- ATGTCGTTAAGCGATACTTCAGTAACTCAAATTAATAGTGATACTAAGAAACGCTTCAGATCAAGAGCTTGGAAATATTTTCGAATCAAGGATAAAGAAGCTAAACTTGCGATTTGCAAAATTTGTCAAAATACCTTTTCGTATCGTACATCTGTAACAAATTTGTTTAAACACGTAAAAAACCAACATAAGACAGCATTACTGTATGATGACCAAGAAGATACTTCTGATGAGTCTGAAAACGCAGAGATCAAGTTCTCTGCATCCGAAAATGAAGGTGATGACATCGATGATAATTCGGAAGGACTCaaAGCTGCCAAGATATTGGAGTCTGTTGAAAATAAAACGGACGAGGAATCTGTTTGCCTCCTCTGCCAGATGACGTTTCCAGACCAAAACTCAGATGACATGATGAAGCACATGGTTAAAGTCCATAACATATCTGGTATAAAGCTTGTAGAAGGCAATGAAAATTTGGAACAGGAGGACAGTAACAGTAAACAATTCAAGAATAAAAACTGTCGGAGTTCCTGTTGGGAATATTTCACCGTAACGGACACCAAGTTAAAGATGGCGACGTGCAACTTCTGCGACAAACAGTTTTCCTTTAAATCAACTGTGTCCAATCTAGTGAAACATATCCGAAGACGACATAACATCGTACATAATCTTCGCCAGGATGAATCAGTAACGAATGGTGGCAAAAAACATACATACAAGCCTCGGTCGGCGGTTTGGTCGTTCTTTAACTATGTAAACGATGATAAAACTGTGTGTGCATGTGTGCACTGCCAGAAGGAGTTCAACGTGGTTGATGGATTGGAGAAGATGAAACGGCATTTGCTGGAGGAACATCCAGAGGCCTTGCTGCATAGTGAAGAAGACAATGTACAAGTAGAATACTTAGACCTCAATGATATGGATAAACTAGAAAAAATTAAGCCTGTTTTAAAGCGAAAATCTAATTTCAAGCTAAGATCTAATTTGGAGCGCAGATCTAGTTTCGATCGGAGATCTAGTTTGGAGCGAAGACCAAGCTTTAGTCAAAGATCTAGCTTCGAGCGAAGGACTAAATGTAAAAGACCTTATGGTAGTCCTGACCGGACTGGACCTGAACCGGACAGTTTGGAAccctttacaaattacataaagtTTCTGCTACAGGATTTACCAGAGGACGTTTCTAAGAAATTGCAAATGAATTTTGTTAAGCAAATTATTGAAGCCCATATTTCTTGCTCTGAGGCAGAGAATAACAAAAAACAAGATGCGACTACAGTTAATAGTACTGTAGGGGGGACAGTGGATAATAGTGGTGTATCAGTGATTGCAGACGAATCTGTAACTGTTAATGATTCAACATTGGCTGTAAATAGTGACGACGATGAAGACTCCAACCAATCCGAACCCGAGGTGGAAGTGGACGTGGAAAAGTTCTTCACCGTGAACCGAGGGTCGAACAGCGCTCGCTGCGAGATCTGCCAGGCGACCGTCGACGCCTCGGGGAACAATATGATGAACCACTTGAAACGAGTGCATCCCAAGATGTTGaAACCAGCTAACGACGACTCTGATGTAGATGACTCAAACGATTTGTACCAGGAAGTTGTTTACTTATACGATTCTGATTCCAAGAGTACGAACAGCGTCAGACCTAAACTGGAGACTCCAAACCCAATTGGTACCCAGAACCACAAGGCGGAATGGAAAATGAGGCAGTATAACAGGCCGAGCATAAGTTTAGAGGATAGAAAAAGAAGGCGAATACAAGACATGCCTACCAACCCACCGGATGCCGTGGACCAATTCTCTGAAGAATTGGAGAATTTTGGCAAATACGTGACATGTTTGATGAAGACTGTACCAGAAGACGTGTGCGCGCAACTCCAAATGGATATCATTAATCTCATAATGACTGCGAAGTACAGGTCCAAATATGAAGCCCGTACGTCGATTATTGAGAAAACAGATAGTGTCTCAGCGGGACCGTATGATGATAGGCCTATTATGGGCTCTGTAGATGCCAGGTTCCCAACCGAGGAATTTTCCGGCCAAAAGCGGATATTGGAGTCTCTTGAAAATAAAACGGACGAGGAATCTGTTTGCCTCCTCTGCCAGATGACATTTCCGGACCATAACCCGGATGAAATGATGGAGCACATGGTTAAAGTTCATAACATATCTGGTATAAAGGTTGTTGAAGCGAGTGGAAATTTGGAACAGGAGGATAGTAACAGTAAACAATTCAAACATTACTTGTTACAAGAAGAGAATCAAACGTCAACATGCTTATTATGCTATAAAACACTCcatACTGTTCACGGGTCGAATTTAATGCATCATCTTAAGTATATGCACAAGATAGAATATCAAAAAGTTGTAGCCCTTAATAAAGGAACCATATCACCGAAAGCTATACCGCCAAGTATTTCGCCAAATTCAAACGATGAAGACTCCAACCAATCCGAACCCGAGGTGGAAGTGGACGTGGAGAAGTTCTTCACCGTGAACCGAGTGTCGAACAGGGCTCGCTGCGAGATCTGCCAGGCGACCGTCGACGCCTCGGGGAACAACATGATGAACCACTTAAAAGGAGTGCATCCCCAGATGTTGaAACCAGCTAACGACGACTCTGACGCCGACGACCCAAACGATTTGTTCCAGGAAGTTGTTTACTTATACGATTCTGATTCCAAGAGCCCGAATAGCGCCAGACCCAAACTGGGGACTCCAAACCCAATTGGTACCCAAAACCACAAGGCGAAACGGAAAATGAGGCAGTCTACCAGGCCGAGCATAAGTTTAGAGAATAGAAAGAGAAGGCGAACACAAGACACGCCTACCAACCCACCGGATGCCGTAGACCAATCCTCTGAAGAATTGGAGAATTTTGGCAAATACGTTACATGTTTGATGAAGACTGTACCAGAAGACGTGTGCACACAACTTCAAATGGATATCATTAATCTCATAATGACTGCGAAACTTAAAAACAGGTCCAAATCTGAAGCCCGTACGTCGATTATTGAGAAAACAGATAGTGTCTCAGCAGGACCGAATGGTGATAAGCCTATTATGGGCTCTGTAGATGCCAGTAAGTCAGATAATAGCATTAATGACGCATTGCCATCGCCCGAAAGTAATGTGGATGAAATTTACAAAACAGAAGATGGTTAG
- Protein Sequence
- MSLSDTSVTQINSDTKKRFRSRAWKYFRIKDKEAKLAICKICQNTFSYRTSVTNLFKHVKNQHKTALLYDDQEDTSDESENAEIKFSASENEGDDIDDNSEGLKAAKILESVENKTDEESVCLLCQMTFPDQNSDDMMKHMVKVHNISGIKLVEGNENLEQEDSNSKQFKNKNCRSSCWEYFTVTDTKLKMATCNFCDKQFSFKSTVSNLVKHIRRRHNIVHNLRQDESVTNGGKKHTYKPRSAVWSFFNYVNDDKTVCACVHCQKEFNVVDGLEKMKRHLLEEHPEALLHSEEDNVQVEYLDLNDMDKLEKIKPVLKRKSNFKLRSNLERRSSFDRRSSLERRPSFSQRSSFERRTKCKRPYGSPDRTGPEPDSLEPFTNYIKFLLQDLPEDVSKKLQMNFVKQIIEAHISCSEAENNKKQDATTVNSTVGGTVDNSGVSVIADESVTVNDSTLAVNSDDDEDSNQSEPEVEVDVEKFFTVNRGSNSARCEICQATVDASGNNMMNHLKRVHPKMLKPANDDSDVDDSNDLYQEVVYLYDSDSKSTNSVRPKLETPNPIGTQNHKAEWKMRQYNRPSISLEDRKRRRIQDMPTNPPDAVDQFSEELENFGKYVTCLMKTVPEDVCAQLQMDIINLIMTAKYRSKYEARTSIIEKTDSVSAGPYDDRPIMGSVDARFPTEEFSGQKRILESLENKTDEESVCLLCQMTFPDHNPDEMMEHMVKVHNISGIKVVEASGNLEQEDSNSKQFKHYLLQEENQTSTCLLCYKTLHTVHGSNLMHHLKYMHKIEYQKVVALNKGTISPKAIPPSISPNSNDEDSNQSEPEVEVDVEKFFTVNRVSNRARCEICQATVDASGNNMMNHLKGVHPQMLKPANDDSDADDPNDLFQEVVYLYDSDSKSPNSARPKLGTPNPIGTQNHKAKRKMRQSTRPSISLENRKRRRTQDTPTNPPDAVDQSSEELENFGKYVTCLMKTVPEDVCTQLQMDIINLIMTAKLKNRSKSEARTSIIEKTDSVSAGPNGDKPIMGSVDASKSDNSINDALPSPESNVDEIYKTEDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -