Basic Information

Gene Symbol
ZBTB47
Assembly
GCA_951805285.1
Location
OX638238.1:5191917-5204404[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.17 16 7.1 3.9 1 23 219 242 219 242 0.96
2 10 0.15 14 7.3 0.9 1 23 249 271 249 271 0.96
3 10 0.0035 0.33 12.4 0.2 2 23 307 329 306 329 0.96
4 10 0.00021 0.02 16.2 2.2 2 23 332 354 331 354 0.94
5 10 4.4e-06 0.00041 21.5 1.4 1 23 360 382 360 382 0.98
6 10 0.54 51 5.5 0.3 2 21 392 411 391 416 0.92
7 10 0.0012 0.12 13.8 3.4 1 19 421 439 421 442 0.97
8 10 0.0017 0.16 13.4 1.9 1 23 450 473 450 473 0.98
9 10 0.00026 0.025 15.9 1.4 1 23 481 503 481 503 0.97
10 10 4.6e-05 0.0043 18.3 0.7 1 23 509 532 509 532 0.96

Sequence Information

Coding Sequence
atggaTTTTTGGGGTGGTAATATATGCCAAGCCTGCTTGAGCGACGACCGAAAAATATATCCCTTGAGTAAACTACAGAATATTTTAGAAGATTTAACATTTTTGCAGgtaaTCAATGTAATGGGCGGAATTTGTTGGGAGTGTCAcagaataataatgaagatgcaggaatttaaaaaacaagcaATCAGagcacaaaatattttgtaccatAACTCTAAGATTAGGTACTTGGGCAATCTCTCATCAGTAAATAAACTTGAGTTTGACTACAAATTCTGTTATGATTCTGACCCTCTCAGATATAACATAACAGGAAATGGATTACATAACATAAAAGaggaaaaaaattacaaagatgATAACGAGAAACTTGAAAGTAATGTATACCAAGACTGGATGTCAGAATGTTCAGAAGGTGGTAAATGTTGTGAAGAGGTAGAAATCAAATTTGTAGAAAAGAATTTGGATTTAAAAGTGGATGAAAAAGTAAATGATCAGGTGAAAAAGGTTTTTGGGTTTGAAAAGATAAAATCAAGAGACACAGAGGATAAGGAACTAAAAGATAAGTTTACTACACTCATTTTCTCAGAGGATGAGATGataagaaatagagaagaaaagagAAACCAGCCAAACTTCAAGAAGATACCGTATAAGTGTGACTCTTGTGTGCTTGGTTTTACTAGGAAGGAGAAATATCATTTGCATTATGAGAAGAAACATGATGAGTCTATTGGCCCCTTCGCGTGTGCAGTATGTTCTACTCGTTTCCCCACCCCCCGGGCAAGAGACAGTCATCATCAGCGCCATTATACCTGCTACCGGTGTCGGCTGTGTAGATACGAGACATTACAACGGGGCTCCGCAGTCAGTCACTGTAGAGTCAAACATGCAGCTGATAGCAGTGGAGCCATACATTGTGGGCAGTGCGGGTTTGTTGCTCGaactcCAGAGGATTTAGCAGAACATAAAAGAACGGAGCATATTTTGTATTGCAACGAATGCGGTGAAAAGTTTAAAGGGAAACATACGCTTCGAACTcacaaaatCCGCATACACAAGTCAGACAGGGACTACATATGTGACATGTGCAGCAGGACATTTAAAACTAAATCGAGGCTGGAATCACACATGGTGACACATAATGCCACACTGGCACAGAAACTGTCTTACTGCAGTGTGTGCGATGTCCAATACAAGAATATTTATGTGTATAGAAACCATTTGAAGAACAGCGCTAATCATTCGGAACGCGTGTACCACTGTCCGGACTGCGACAAACGTTTCGCTTCTAAGGTGTACTGGCAGAAGCATTGTGACTTCTACCATCTAAAGAAATCGCAGTACAAGTGTCATATTTGTGATAAGTTATTAATATCGGACTGGCGTCTCAAGAATCACATGCAAACTCGTCACGGGTCGAAACGAACGAGGAACCACTCTTGTGATGTGTGTGAGAAGAAGTTCTTTACGGTGCCGACGCTCCGCGCGCACCAACTGACGCACTCGACGCACCGCAGCTACATGTGCGAGCAGTGCGGCGATACGTTCAAACAGCGCGCCGCGTTACACACGCACATGCGAGCGGTGCACTCACACAGACGGGCGTAG
Protein Sequence
MDFWGGNICQACLSDDRKIYPLSKLQNILEDLTFLQVINVMGGICWECHRIIMKMQEFKKQAIRAQNILYHNSKIRYLGNLSSVNKLEFDYKFCYDSDPLRYNITGNGLHNIKEEKNYKDDNEKLESNVYQDWMSECSEGGKCCEEVEIKFVEKNLDLKVDEKVNDQVKKVFGFEKIKSRDTEDKELKDKFTTLIFSEDEMIRNREEKRNQPNFKKIPYKCDSCVLGFTRKEKYHLHYEKKHDESIGPFACAVCSTRFPTPRARDSHHQRHYTCYRCRLCRYETLQRGSAVSHCRVKHAADSSGAIHCGQCGFVARTPEDLAEHKRTEHILYCNECGEKFKGKHTLRTHKIRIHKSDRDYICDMCSRTFKTKSRLESHMVTHNATLAQKLSYCSVCDVQYKNIYVYRNHLKNSANHSERVYHCPDCDKRFASKVYWQKHCDFYHLKKSQYKCHICDKLLISDWRLKNHMQTRHGSKRTRNHSCDVCEKKFFTVPTLRAHQLTHSTHRSYMCEQCGDTFKQRAALHTHMRAVHSHRRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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