Tact030303.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638238.1:9233910-9261568[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 1.9e+02 3.7 3.2 1 23 236 258 236 258 0.94 2 13 0.011 1 10.8 1.9 1 23 265 287 265 287 0.97 3 13 0.21 20 6.8 1.1 1 23 291 313 291 313 0.92 4 13 5.5e-05 0.0052 18.1 3.4 1 23 318 341 318 341 0.98 5 13 0.016 1.5 10.3 0.3 3 23 347 368 345 368 0.94 6 13 8e-05 0.0075 17.6 1.4 1 23 380 403 380 403 0.96 7 13 0.033 3.1 9.3 0.2 2 23 446 468 445 468 0.96 8 13 0.071 6.7 8.3 2.7 2 23 486 507 485 507 0.96 9 13 0.03 2.8 9.5 0.6 1 16 513 528 513 536 0.80 10 13 0.03 2.8 9.5 0.6 1 16 542 557 542 565 0.80 11 13 2.1e-05 0.002 19.4 0.6 1 23 571 593 571 593 0.98 12 13 2e-05 0.0019 19.5 2.2 1 23 600 622 600 622 0.96 13 13 2.5e-05 0.0023 19.2 2.0 1 23 628 651 628 651 0.94
Sequence Information
- Coding Sequence
- ATGGCATCCAAATCCAAGTCGATATGTAGAATATGTTTGGCTACAAATGAGAAGCTGTATAGCATGATACATGATGATCTGAAAACTGTGTACCAAGAGGTTACTGGAGTCAGTGTTTCAATTGTGGATGACTTACCTAAAGCACTATGTTGGGAATGTTGCTATCGGCTGCTGAAATGTCACCGATTCAGAAATCAAGCTCTTCTCACACACTCTCTGTTGAAGTCCTTGCTGGACAACGAGGGATCTATCACAAAACAAAACGTTAAGAAAATAAACAGACTCAAAAATGGATTACAATCAAAATTAACTCAGTGTGTGAATACGGGAAATTGCTTTATTGTAAAGGAATTTGAAGAAGAGATCAAAGAGAATGAAATCAATCAAAATGGCAGCTCAGTACCGTCAGCTGATCAACCAGAGATTAAAAAGGAATTTAGTGATGATCAAGCCGAGGCAAAAAAGGAATTTAGTGATGTAGAAAAGGAAACCGATAATTATGATTCTCACGATGAAAATGACTCGGATGACAGTCGGATAGATAAAAAGGAAGTTgtcaagaaaaaaattgttgccaaatctGAGGCAAAGCCGAAAGTAAAAAGTCTGATAAGCAAGTTATTTACGATAACCGATTTGTCATTTGAAGAACAAGTACAGGAAATAGAAAAGAGAAAATTGACTGATAATTATACGCAATCTGAATTTAAGTGTGATAAGTGCTACAAGGGATTTTTGTACGAATCGGCTTTTAAATTTCACATGACTCGGCATACAGATAAAAGCGGTAAGTACGAGTGTGAGGTGTGCAAGCTCCACTTCAAGGTGTTCAGCGCCATGAAGCGCCACGCCACCTCGCACTGGCAGAAGTTCCAGTGTACACAGTGCCCCTACGTCACCAGCAGAATCCACCAAGCGCGGCTGCACGAGGCGTATCACAATGGAGCGCAGTACACGTGTTCGCACTGCGACGAGGTCTTTACTAAACAAACAACGTACATGAGTCACCTGCGCGTCAAACATCCCTCGGACATAGCTTGCGAGTTGTGCGGCAACTCGTTCATCAGCCAGAAGGGTCTTTATCTGCATAAGAAATTAAAACATCGCTTTGATGAAGCTGTTACTCCCGATGAGAAGCACCGCTGCGAGCAATGCGACTTGAGCTTCGTCAAGAAGGAAGCGCTGCAGACACACCTGCGAGCGAAACATAACGtcggTGTCCGCGAAGACGGTGTGATAGCCCGCCGCAGTAAGGGCTCGGATCCGGACACGGTGCGACGGAACAAGATATTGTCCCGGCGGTATGTCAGGCGGGGCAGGCCTAAGGAGCCTGTGCAGTGCGAACAGTGCGACACGACTCTGCCCGACCCGCGCTCTTACTACAGCCACTTCCGGCGCGCGCACCCCGACAAGAACAGAACTAGCTATCCGTCTCTGTCGCGCAACCATCCGTGCATGTGCGAGGTGTGCGGCCGGATATTTAAGTGTCGCgccctactagaagaccacagcaacacgcacagcgccggcgtgcagttcaagtgtccgcagtgcgacaaggtgttcctcaccagatacagcttggcgcaagaccacagcaacacgcacagcgccggcgtgcagttcaagtgtccgcagtgcgacaaggtgttcctcaccagatacagcttggcgcaagaccacagcaacacgcacagcgccggcgtgcagttcaagtgtccgcagtgcgacaaggtgttcctcaccagatacagcttggcgcTGCACATTCGCAACCACAGCGCGCACCGCACGATGTACTCCTGCAGCGTCTGCGAGAAGAACTTCACTACTAGGAACAACTTGCAGCGGCACGAGTTTAGCCACACAGGCTTGAAGCCGCACAAGTGCTCGCTGTGCGGCAAGAGCTTCAAGTTCGCGGACGAACTGCGCGCGCACTTCCAGTACGTGCATCTCAAGAAGCCGTACCCGAAGCGCGCGCGACCGCGACGGAACAAACAGGTGTTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGATTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTGTGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTGCGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTACGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTATGTAGTGTGCGTACCGGTTCCAGTGCGTGCACCTCAAGAAGCCGTACCCGAAGCGACGGAACAAACAGGTGTGTGTGTAGTGTGCGTACCGGTTCCAgATTTGTCTAAGACCCTTGCCTCGGACTGCAATGAACGCTGGCCGGCAGAGAAGGCAGAGGAAGAATGA
- Protein Sequence
- MASKSKSICRICLATNEKLYSMIHDDLKTVYQEVTGVSVSIVDDLPKALCWECCYRLLKCHRFRNQALLTHSLLKSLLDNEGSITKQNVKKINRLKNGLQSKLTQCVNTGNCFIVKEFEEEIKENEINQNGSSVPSADQPEIKKEFSDDQAEAKKEFSDVEKETDNYDSHDENDSDDSRIDKKEVVKKKIVAKSEAKPKVKSLISKLFTITDLSFEEQVQEIEKRKLTDNYTQSEFKCDKCYKGFLYESAFKFHMTRHTDKSGKYECEVCKLHFKVFSAMKRHATSHWQKFQCTQCPYVTSRIHQARLHEAYHNGAQYTCSHCDEVFTKQTTYMSHLRVKHPSDIACELCGNSFISQKGLYLHKKLKHRFDEAVTPDEKHRCEQCDLSFVKKEALQTHLRAKHNVGVREDGVIARRSKGSDPDTVRRNKILSRRYVRRGRPKEPVQCEQCDTTLPDPRSYYSHFRRAHPDKNRTSYPSLSRNHPCMCEVCGRIFKCRALLEDHSNTHSAGVQFKCPQCDKVFLTRYSLAQDHSNTHSAGVQFKCPQCDKVFLTRYSLAQDHSNTHSAGVQFKCPQCDKVFLTRYSLALHIRNHSAHRTMYSCSVCEKNFTTRNNLQRHEFSHTGLKPHKCSLCGKSFKFADELRAHFQYVHLKKPYPKRARPRRNKQVLRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPIPVRAPQEAVPEATEQTGVCVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVYVVCVPVPVRAPQEAVPEATEQTGVCVVCVPVPDLSKTLASDCNERWPAEKAEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -