Tact019071.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- pol
- Assembly
- GCA_951805285.1
- Location
- OX638226.1:4040945-4065673[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00083 0.078 14.4 3.6 1 23 234 256 234 256 0.98 2 11 0.0011 0.1 14.0 6.5 1 23 262 284 262 284 0.96 3 11 0.01 0.98 10.9 3.4 1 21 290 310 290 311 0.95 4 11 0.00094 0.089 14.2 1.0 1 23 2057 2079 2057 2079 0.97 5 11 3.2e-05 0.003 18.8 0.6 1 23 2085 2107 2085 2107 0.97 6 11 9.8e-06 0.00093 20.4 0.1 1 23 2113 2135 2113 2135 0.98 7 11 0.00025 0.023 16.0 0.4 1 23 2140 2162 2140 2162 0.96 8 11 1.5 1.5e+02 4.1 3.4 3 19 2170 2186 2169 2192 0.92 9 11 0.00012 0.011 17.0 0.4 1 23 2293 2315 2293 2315 0.97 10 11 0.0055 0.52 11.8 3.3 1 23 2380 2402 2380 2402 0.96 11 11 0.00013 0.012 16.9 4.3 1 23 2412 2434 2412 2434 0.97
Sequence Information
- Coding Sequence
- ATGTGTATGCCGACGCCGAGTAATGTTTCGGGCTTTGGTTATTCGTGGGGTTTCACCAGTAGCGCAGACCTCACGAAGGGTGAAGTGGATACTCCGAGCAGCATGAGCTATACGCTTGGCAATACAGTGTCACCAGAAACCACGTTGACTGTGATGTCCCATAAGACCCCACAAGTGCAGGAAAAAGTTGGAGCAGTAGTAGCAGTGTCAAACTCGGCTGCACAAGTGACTAGAGTGGTGACAACTGGGACCCCGGTGACGGCCCGACGAGCAATGTTTGTGTTGAACGAAGCACCCGGTCACACATTAAACAGGGTTTCACAGCAGAACCAAACGGCTACTATACAAACGACGTCGTTGGCAGGGAAGTCGTTTATGACTCCGATCGGTCCCATACAACTGACTGCGGAGGAATGCAATGAGATTCTCATGAAGAGAGCGCTACAAGCGCAAGGGATCGCAACACCTGTGATAGATGCGTCTCAGTTGAATCATACGATATTGAATGGCGGTCTCAAGAGCTTGGCAGAGGCGACGACACAACAGTCCCAAGCTGATACGATACAGACTACAACAGTACATCAACATCACTTGTTGCATACGAAGCAGGAGCCCGGTACAGCGAATAATTCGCCCAAAGCGGAGTTGCTCGGTAACAGCGTGATGACGACGGTGCAGCCGACGGTAAAGGAGCGGCCTTACACGTGTGACGAGTGCGGCAAGTCCTTCCTGTTGAAGCACCATCTTACTACACACGCGAGGGTGCATACTGGTGAGAGACCGCATGTATGTGCGCACTGCGGGAAAGCCTTCGCGCGGAAACATTGTCTCAACACACACTTGCTGCTACACTCGGCCGACAGGCCATACCGGTGTCACGAATGCAAGATGGCGTTTACACTCAAACACCACCTCGTCACTCATTCCAGGCTCTGCTTCCCGTTATCCTGGAAAAGAAGTGTCATCCTGTGCCCTATTAAGAAAGGAATCATAAACGACGAAGAAATTATACAACGGAATGTATTCGACGGACGTCGTCTTCTTATCGGTCGCCCACGCATTATTGATGCAGTTACAAGCGACAATTTAACGAAGTCACCTGTTCTTTCTCCTCGTTTAACTAGGAAAGCTGCTGCAGCCCTCGCAATGGCCGAAATCGATTTAAATAtcttattcaaatttattaagcCTTACGATGGTAACAGAGAAACCCTAAACTCGTTTGTTGTTAATTGCGATAACGCTTTCGAAATTGCGTCGGAAAATCAGAAACCTATTTTACTCAAATATATCCTAAGCCAGTTAAATGGTAAAGCGGAGATTGCTTGCTCTATAAAGGAGTTTACATCCTGGGAACagttgaaagaatttttaaagaccCAATTTAGTGAACGCAAGCACTACTCGCATTTGCTTGCCGATCTCCAGGAGAGCAAACAAGGTCCGCAAGATAATGTTAGGCAATATGCATTGCGCATGGAAACTTACCTTTCGCAGTTATTAACAGAAATATCATTATCGACCTCTAAGGCCAAGGAAATACCTGGCCGTACAGCAGCTATGGAGGACCTCGCTCTCCATCACTTTGTTATGGGCCTCCATCCTCGGATCTCTAACATTGTCAGATGTAATGGCCCCAAAACATTGAATGAGGCCATTAACCTTGCAATCTCGGAAGAGCGCATACAGCAGACACTATACAGACGTCCACAGGCCGAACAAAAACCTTCtagcaataatattaataaattcaagGCAGAAGTCTCGTCATGGTGTCGTCCGAGACGTTACGTAAAAATCGGCACCGAATCTAAATCTATACATCCAAGGGACCACACGGGTAACCAGCCCCAAATAAGCGCCCTATCCTCAAATCCAAGGGTCCACTCGGGTAACCAGCCCCCAATAAGCGCCCTATCCTCAAAATCAAGGGACCACACGAGTAACCAGCCCCAAATAAGCGCCCTATCCTCAAATCCAAGGGACCACACGGGTAACCAGCCCCAAACAAGTGCCCTATCCTTAAAACCAAGGGACCACGCGGGTAACCAGCCCCAAACAAGTGCCCTATACTTAAAACCAAGGAACCACACTGGTAACCAGCCCCAAATAAGTGCCCTATCCTCAGAACCAAGGGACCACACGGGTAACCAGCCCCGGATAAGTGTCCTATCCTCAAGACCCAATAAGGATAACAAGGAAgtctatgaaataaatatagatacatCTAAGAGATTATTACCCCATGTGTTACTAGATTCACAAGCCTCAGATATACCCCTCTCTTTACTGGTAGACTCGGGCTCTGCTATATGTCTACTAAAAGAATCCTGTATCCATAAAacccaaaaattaaataaagagcCCATAAAACTCAAAGGTATAGACCCTGGAGATGAACCAACACAAACTGAAGGTCATTTCCAATTGAAACTCAAATTagacaaaaataaatctatCTCATTTAAGTTCCATGTCGTAAGGGACATTAACCTACCCTACGACGGTATTATAGGTACAGACCTCCTAACTGCATTCGGCTGTAAAATCGATTATACTAATGATATCTTGAAAATAGACAAATTAGATGTTAAATTACATTTCTCTGAACCTTTTTATGTTATCCCTCCACGCAGCGAAGCTGTTATAGAGTGCTCTGTCCAGGAAACTAATCTCAAAGAAGGTATCGTTACCGATCAACATTTATCtgataacattttaatatcCAATTGTATCGTTAAAGTCAAGAATAATAACCGTATTAATCTAACAGTCGCAAATACTTCAGAAAcctatataaatgtaaaaacgaatttaaaattaaacatagaACCTTTGTCATCTGATTGTTTCCCAATTAACATGAACATCCAAGAAACATATCATCGAActaatgaagtaataaaatcattaagAACTGATCATCTTAACCTAGAAGAGAAAAATGCTCTAATAGAACTTTGTTCCCAATATTCAGATATCTTTCATTTACCTAAAGATCAATTAACCCACACTCCAGCTCTTGAACACCAAATTAAAACGAATAGTGATATTCCTATTCATACTAAGTCCTATAGATTCCCAGAGTGTCATAAGACAGAAGTGGAGACTCAAATCAACAAAATGTTAGATCAGAACATCATAGAACCTTCATCCTCTCCTTGGAGCTCACCAATTTGGATAGTTCCCAAGAAATTAGATTCCCAGGGCCAACGCAAATGGCGAATTGTCATAGATTATAGAAAACTGAATGACATTACCATTGGAGAAACATATCCTATCCCGCAGATATCCGAGATTCTTGATCAGCTAGGGAACAGCAAATACTTTACTACCTTAGACCTCGCTTCTGGTTTTCACCAGATTCTCATCTCCCCGGAAGACGCTCCTAAAACGGCGTTCTCGGTACCTCAAGGACATTATCAGTTCAACAGGATGCCGTTTGGGCTTAAGAATGCCCCATCCACTTTTCAGAAGCTCATGAACACCTGCCTTTCTGGTCTTCAGGGTACTCGTTGCTTTGTATATCTCGACGATATTGTCATTTATTCTCACGACTTAACTACTCATATCCTTAACCTAAAAGCTGTTTTTGATAGGATTCGTAACTTTAATCTAAAACTTCAACCTGAAAAGTGCGAATTCCTGCGTAAGGAAGTTGTTTACCTTGGACACATAATTAATGAAAAGGGTGTTCAACCAAATCCCGACAAGGTAAAAGCGGTGACTGATTTTCCCATTCCTCAGTCTCCTAAAGACGTAAAATCGTTTTTAGGCCTTGTGTCATATTACAGACGTTTTATACAAGATTTTTCCAAATTAGCCAGACCTTTAACAAACTTGCTTAAAAAGGATGTACCTTTCAAATGGGAAAACGCACAGCAATTATCTTTCGAAACCCTTAAAAACAAGCTTGTCTCTTCCCCAATATTATCGTATCCAGATTTTACTCAACCATTCCTACTCACCTGTGATGCCTCTAATTATGCGATATCCGCTATCTTATCCCAGGGTACAATAGGCCAAGACCGACCTATTGCATTCGCATCCCGGACTCTAAATAAAGCAGAGTGCAACTATAGCGTAACAGAAAAGGAGTGCCTCGCCATAATATTCGGCACTAAAGTATTCCGTCCTTATCTCTATGGTAACCGTTTCACGATCCTGACGGATCATAAGCCCCTGGAATGGCTTTTTAGCTGCAAAGATCCCGGTTCAAGACTTATCCGTTGGCGACTCAAACTGGAAGagtttgaatataatattaaatataaaaagggtaaaataaACGCCAATGCCGATGCCCTATCACGGTTTCCCGTCAATCCAGTCCAACCTGATCGAGGAGTAGAAAGGGAGCAGGAAGGAGGGTTAGATAGGGATCTCATGGATCTCTTAATATCGCCACCCTCATTCAACTCTGAGGAACTCAATCTTGATTCCCTAGATCCTCTCGCCCCCAATCCTGGTGATATTTTACCCTTACCTGAAATAGAAATCCCCAACTTACCTGATGTAGAGCCATCTCCTGATATCCTTAATGCTCCTGGAAAAGAAATTCACGACTTACCTGACGTAGAGCCGTCACCCAATATTCCTAACGATCCTGGAATAGAGATCCTCGACTTACCTGACGTAGAGCCGTCGCCCAATGTCCTTATTGATCCTGAAATGGAAATTCATAACTTACCTGACGATGATTATTCTTCCTTCCTGAAGAAAATGTCCAATAAAGACATTACTTTCAATACAATTATCCAAGAACATAACGAAgatataacaaaatcaaaatataaagttattattttacccACTTCCATAGACTTAGACGAATCCAACCCCTTTGTACAAAACGTTATCGATAATATACCCAATAATTCGGAAATCATtaataaagaaagaaaccttCATTCTTTTATCTCTTTCACACATGAAAACAAGACATATTATCTCCTCTTTTTCAAAGTTCATCACTTCGATAATTCCCCGTATGGAGATATTTATAAAAGCCTTAAATCTATCAGAAATGAACTGATCGTTAACCTTGATTTGAATTCTACACATGATATCGCTGTAACAGATTTTAAAAATCCATTCGATACTCACCAGTTCGTCAAAATCTACAACATGCTCCTTTatctttttaataatacaaatattaacgTGCATATATACAAGGGAATAATTATATATCCATCCTTGTCCGAAATTCCAAAAATACTCAAGGAAAACCATAATATCCCAATTGCCGGACACCTTGGTAGTAATCGAATGCTTAAGCGGATCCAGGAGACCTTCTACTGGAGAAATATGCGCAGCGATATAGAATCCTTCGTGAAGAGATGTCCACAATGTCAAACTAATAAAGCTCTTAGGCAAATAAATCGTGCTCCCATGCAAATTACGAGCACATCAACCCAACCTTGTCAACGCATATCCTTGGATGTTGTCGGGCCGTTACCCGAGGCGGGACCtgcaaaattaaaatacatattaacaATACAGGATGATCTTACAAAATTCTCCTCAGCTTATCCAATTCGCAGTATCACAGCAGAAGAGACGAGTGAGTGTCTTCTTCATTATATTTCTATATTCGGTATCCCAAAGACGATCCTCACGGATCAGGGAACCAACTTCACTTCAGAACTCTTTAAGAAAACCTGCGAATTCCTTAAGATAAAGAATCTGTGGTCCTCTCCTTATCATCCACAGACCCAGGGTGCTCTGGAAAGAAGTCACTCTACACTAAAAGAGTACCTTAGATCTTTCGTTGACGAAGAGCAATCAAATTGGCCACGGTATGTTTACACGGCCATGCTCACCTACAACACGACTATTCATTCCACAACACACTTTACACCCCACGAACTGATGTTCGGAAATAAACCTTTGATTCCAAGCTCAATTTATGAGGAAGTTCCTGGAGCTACATACCCTGATTATGTCCGGATGCTTCAAAGTAGACTGAAGTATTCACGAGAGAAAGCCTTGGACTTTATTAGAAGATCCAAGGAATCATCCAAAACCTATTATGACAATCATACACGCCCAGTTAGATACAAAATTGGTGATTATGTATACCTGAAAAACCACTTGAGAATGCGTAAAGCACTTTCACCCACCTGGAAAGGACCCTATAAAGTGGTGCACAGTAGAGACCGTCCGTTCGTGTGTGGCGAGTGCGGGCGAGGGTTTCCACTGAAGAGGCACCTAGTGACGCATACAAAATATCATGCTGGTGAGCGGCCGTACGTGTGCGGTGACTGTGGGGAGAGCTTTGCACAAAAGGACCACCTAGTGATGCACAGTCGGTTCCACGGGTCACTGTCGCCGTTCCAGTGCCCCGACTGCGGCGTGGCGTTCGCGCGCAAGTTTCAGCTCGTGAACCACGGGCGGGTGCACGGGCGCGTGCCCCACGCGTGCCCCGTCTGCGGGAAGGAGTTCCTGCAGAAACGGACGCTTGTCGCGCACATGAAAATCCACACGGGAGAAGGCGTGGTCGCGTGTTTAGATTGCGGCGAAGCGTTCAAATGTAAATCAGAATTACAACAGCACTGTAAAATAAATCGACATTGCCTCACGGCAAACCAAACTcaacagcaacaacaacaacagcagcagcaacaacaacaacaacaagcgCAGCAACAAGCGCAACAGCAGGCACAGCAACAACAACAGGCGCAACAACAAGCGCAACAGCAGGCGCAGCAACAAGCGCAAcaacagcaacaacaacaacagcagcaacaacaacaacagcagcagcagcagcaacaaCAAACTACTGTGATAAAACAAGATGATTTTAAGCCACAAATTGTACAGGTAATTGGTGCTGATGGTCAGATCCTAACGGAGAAAGCGCCTGGATACGCGTGTCCTGAATGTGGATCCTGTTTTAACACTAAGGAGGCGCTGTCGCTGCACGTGCGGCTGCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCCGGGCTCGTCGCCGCCGCGCAGCACGCGCACCACAATCAACCCATCCAAATAATAACGTCCAATCCCAGTAATAATGTAGTTCATACGCAAGTTATAGCAACaAATCATCACGTAAATCCGCCCCGACCCAAGATACACTTTTGTGTCGATTGTGGGAAAGGGTTTGCAGCGAAACATGGTCTGCTTGCTCATCATAGGAGACACCCCGAGGGGAGCTGCACGCTGCGCACGCACGTGTGCGACCAGTGCGGCAAGGCGTTCTTCCAGAAGAACCACCTCATGCTGCATCAGCGACAGCATATGGATCTGCCGCCGCGATCCAGCCAAGCGTCCCAAGCGGCGCAGCAGCAAGCAGCGCAGCAGCAGGCAGCGCAGCAAGCAGCGCAGCAGGCAGCGCAGCAAGCCGCGCAGCAGGTGCAGCAAGTCCACCACCAGGTGCAGCACGCCGCGCTAGAGCTGGATGAACACGCGCAGCATATACAGGTGGTAACGAACAGGTCAGGGCAGGTGATTGGCAATCAGATCGTGGTGGGGAGACGCGGCGCGCTCGGCTCACAGCTACACATAATACCCGCGCCGAGGGACACCAAGCCCACGCACTTGACGGCCAAGAGACACCAACACACAAACAGTGGTGATATAAAAGAAGTCGGCGGTCTAGTGGTATCAACGGGTCGTGGTGCGAACATGATCAAGTATGAGATCTCTCTGCCACCCCAGAACTCTGTTGTGCAAGTCCAGCAGTTGGACTGA
- Protein Sequence
- MCMPTPSNVSGFGYSWGFTSSADLTKGEVDTPSSMSYTLGNTVSPETTLTVMSHKTPQVQEKVGAVVAVSNSAAQVTRVVTTGTPVTARRAMFVLNEAPGHTLNRVSQQNQTATIQTTSLAGKSFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTILNGGLKSLAEATTQQSQADTIQTTTVHQHHLLHTKQEPGTANNSPKAELLGNSVMTTVQPTVKERPYTCDECGKSFLLKHHLTTHARVHTGERPHVCAHCGKAFARKHCLNTHLLLHSADRPYRCHECKMAFTLKHHLVTHSRLCFPLSWKRSVILCPIKKGIINDEEIIQRNVFDGRRLLIGRPRIIDAVTSDNLTKSPVLSPRLTRKAAAALAMAEIDLNILFKFIKPYDGNRETLNSFVVNCDNAFEIASENQKPILLKYILSQLNGKAEIACSIKEFTSWEQLKEFLKTQFSERKHYSHLLADLQESKQGPQDNVRQYALRMETYLSQLLTEISLSTSKAKEIPGRTAAMEDLALHHFVMGLHPRISNIVRCNGPKTLNEAINLAISEERIQQTLYRRPQAEQKPSSNNINKFKAEVSSWCRPRRYVKIGTESKSIHPRDHTGNQPQISALSSNPRVHSGNQPPISALSSKSRDHTSNQPQISALSSNPRDHTGNQPQTSALSLKPRDHAGNQPQTSALYLKPRNHTGNQPQISALSSEPRDHTGNQPRISVLSSRPNKDNKEVYEINIDTSKRLLPHVLLDSQASDIPLSLLVDSGSAICLLKESCIHKTQKLNKEPIKLKGIDPGDEPTQTEGHFQLKLKLDKNKSISFKFHVVRDINLPYDGIIGTDLLTAFGCKIDYTNDILKIDKLDVKLHFSEPFYVIPPRSEAVIECSVQETNLKEGIVTDQHLSDNILISNCIVKVKNNNRINLTVANTSETYINVKTNLKLNIEPLSSDCFPINMNIQETYHRTNEVIKSLRTDHLNLEEKNALIELCSQYSDIFHLPKDQLTHTPALEHQIKTNSDIPIHTKSYRFPECHKTEVETQINKMLDQNIIEPSSSPWSSPIWIVPKKLDSQGQRKWRIVIDYRKLNDITIGETYPIPQISEILDQLGNSKYFTTLDLASGFHQILISPEDAPKTAFSVPQGHYQFNRMPFGLKNAPSTFQKLMNTCLSGLQGTRCFVYLDDIVIYSHDLTTHILNLKAVFDRIRNFNLKLQPEKCEFLRKEVVYLGHIINEKGVQPNPDKVKAVTDFPIPQSPKDVKSFLGLVSYYRRFIQDFSKLARPLTNLLKKDVPFKWENAQQLSFETLKNKLVSSPILSYPDFTQPFLLTCDASNYAISAILSQGTIGQDRPIAFASRTLNKAECNYSVTEKECLAIIFGTKVFRPYLYGNRFTILTDHKPLEWLFSCKDPGSRLIRWRLKLEEFEYNIKYKKGKINANADALSRFPVNPVQPDRGVEREQEGGLDRDLMDLLISPPSFNSEELNLDSLDPLAPNPGDILPLPEIEIPNLPDVEPSPDILNAPGKEIHDLPDVEPSPNIPNDPGIEILDLPDVEPSPNVLIDPEMEIHNLPDDDYSSFLKKMSNKDITFNTIIQEHNEDITKSKYKVIILPTSIDLDESNPFVQNVIDNIPNNSEIINKERNLHSFISFTHENKTYYLLFFKVHHFDNSPYGDIYKSLKSIRNELIVNLDLNSTHDIAVTDFKNPFDTHQFVKIYNMLLYLFNNTNINVHIYKGIIIYPSLSEIPKILKENHNIPIAGHLGSNRMLKRIQETFYWRNMRSDIESFVKRCPQCQTNKALRQINRAPMQITSTSTQPCQRISLDVVGPLPEAGPAKLKYILTIQDDLTKFSSAYPIRSITAEETSECLLHYISIFGIPKTILTDQGTNFTSELFKKTCEFLKIKNLWSSPYHPQTQGALERSHSTLKEYLRSFVDEEQSNWPRYVYTAMLTYNTTIHSTTHFTPHELMFGNKPLIPSSIYEEVPGATYPDYVRMLQSRLKYSREKALDFIRRSKESSKTYYDNHTRPVRYKIGDYVYLKNHLRMRKALSPTWKGPYKVVHSRDRPFVCGECGRGFPLKRHLVTHTKYHAGERPYVCGDCGESFAQKDHLVMHSRFHGSLSPFQCPDCGVAFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGVVACLDCGEAFKCKSELQQHCKINRHCLTANQTQQQQQQQQQQQQQQQAQQQAQQQAQQQQQAQQQAQQQAQQQAQQQQQQQQQQQQQQQQQQQQQTTVIKQDDFKPQIVQVIGADGQILTEKAPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAAQHAHHNQPIQIITSNPSNNVVHTQVIATNHHVNPPRPKIHFCVDCGKGFAAKHGLLAHHRRHPEGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLPPRSSQASQAAQQQAAQQQAAQQAAQQAAQQAAQQVQQVHHQVQHAALELDEHAQHIQVVTNRSGQVIGNQIVVGRRGALGSQLHIIPAPRDTKPTHLTAKRHQHTNSGDIKEVGGLVVSTGRGANMIKYEISLPPQNSVVQVQQLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -