Tact024662.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- ZFX
- Assembly
- GCA_951805285.1
- Location
- OX638232.1:622195-626856[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.14 13 7.4 0.0 6 23 292 310 292 310 0.96 2 12 6.1e-07 5.8e-05 24.2 0.3 2 23 366 387 365 387 0.97 3 12 7.1e-05 0.0067 17.7 0.9 1 23 394 417 394 417 0.98 4 12 5.9 5.6e+02 2.2 0.1 1 23 423 445 423 445 0.87 5 12 0.00082 0.078 14.4 3.0 1 23 451 473 451 473 0.98 6 12 1.1 1.1e+02 4.5 2.3 1 23 618 640 618 640 0.95 7 12 0.00021 0.02 16.2 1.4 2 23 647 669 646 669 0.92 8 12 4.2e-06 0.0004 21.6 1.0 1 23 675 697 675 697 0.98 9 12 6.4e-07 6e-05 24.2 1.0 1 23 703 725 703 725 0.98 10 12 0.00078 0.073 14.5 0.4 1 23 731 753 731 753 0.97 11 12 1.2e-05 0.0011 20.1 2.0 1 23 759 781 759 781 0.95 12 12 0.28 27 6.4 3.9 1 23 787 810 787 810 0.88
Sequence Information
- Coding Sequence
- ATGAGTGCCAATTGTAACGCAAGCGTACCCGAAGGGCCTCCGATAGTATCCCCTTTGGTGATGGTTGAACCAGTCAAATTGAAAATTCGCTACCCTGACTTGATAACACCGGATCGTCTTGCAGTGCGGGATGATTACAACAACATATGTCGGCTATGTGCAGCCGAAACTACTAATCCCATCCCACTGTTCAAGGGCGAAGGCGCGAAGTACGATATACCCGGCAAAATACGCAAATACATGTCTTTAAGGGTGCTGGCGTCGGAGCTAATGCCGCAGACGGTGTGTCCGCCGTGCGCCTCCACGCTGCTGTCGTGGCACGAGCTGGTGCGCAGCGCGCGCCTCGCAGACTTCATGCTGCGCCGCAAGCTCGGCGCCTCGCGCGCGCTGCCCATACCGTCCCCGCCACCCAGAGCAGACGGCACCGAAATCATCAAGAATGGAGTGAAGTGTGAGTCGCCGGCCTTGTTGATCTCTGTAGTAAAAGATGTATTGACTAATTACTTCCACTCACTGAATATCGAAGGAGACAATGCGGACTTCGAATACGTTTGCCAAAAATGTGACGCGACGTCCGTCGGAAACCGAATCGAGGATCTAACCGAACATTTAACGACAACTCACGCGGCCGCAGTAGACTGTAAAGAATCAGTAGAAGATTTCATCAGAAGCAACATAACGTTCGAGGAGAACTTAATGATGGAGGAATTCGTGGACAGCGACGGCGACGCGAGAAGCGAGCGGGACCCGAGCGAGGTGGCTCTCCCGCAGTTCTGGTGCCCGCACTGCAGTAGCATATTTTCGTCCCCGACGAGACTGTTGTGCCACCTCGGGAAGCACGTGGACGTGGACGACGAGGCCGGAGTAGCGTGCTGCGGCGCCGTGTACAGCGACCGGGCGGCGCTCGCCTCGCACCTCCGAGCCCGCCACGAGCGACTCGCGCCCACCGGAACAATATGCCGCACGTGCGGCTTCTCCGCGGACGACGACGGGATCCTGCAGGACCACATCGACCGGGTGCACGTCGAGGCCAGGGCGAACTCGGCGGAACGAGATAAACGGAAAACTTCATCCGGCCAAAAATACATTCGCGTCGAGTGCCCGGAGTGCAACAAGATGTTCTCCAACAAGTACAACATGGCGGTCCACCTGCGGAGCCACCGAGCTCGGCCGGGGAAGTTCACGTGCGAGACGTGCGCCAGGAGCTACCGAAGCCGCGGCAGCCTGACGCAGCACCGGCGCGTGGTTCACGAGGGTGAGCTGCGGCACGTGTGCGCGGCGTGCGGGGAGGGCTTCCCCTCGCGCCTGGCGCGGGACGTCCACGCGCGCCTCCACACCGGCCATCGGCCCTACTCCTGCCACTTCTGCGACAAGTCCTACCGAGCTCGGAACACCCTCGACAGACACCTCGAGATGCACCTCGACGTCAGAAAGTTTTCGCCGACCCTGCAAGTCGACCTCCGAAGGTCTGGGCCGACGCGGAGGGAGAGCCCGACAGAGTGTAGCGACCCGATCGACTGGCCCGACGAGCCCGACCGCGTCGGCGACTCGTTCTCGGAGGATGACGTTCCGCTGTCAAGTATCGCTACCAAAAAATCAACCGAGCTCTACGACAGACTCTTCGCGGCGCTGGTGAACTTCAAGGAGCACGTCGCGAGCGAGCACGAGTCGCCCGAGTGCAGCTACCCGGACTTCACGGAGTCGAGCGAGTCCGAGGGCGACGGCAATGAGGAGGCGGACGCGAGCGGTTACGACGACCTGACGCGAAGCAACATGCGGAAGGATCGCATGGACGAGCGCACGCGGCTCGAGCTGAGCGAGGCGCGCACCGAGCTCGGCGGAAAGGTGTTCTACACGTGCTGGGCGTGCGGCAAGAACCTCAGCTCGTCGCACACGTACCTGTTCCACAAGCGGATCCATACGGGCGAGCGGCCGTGCGTCTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCGGCGGCCTGCAGCGCCACCTCACCGAGACGCACGAGCGGCTGCGCCGGTACTCGTGCGACCTGTGCCCTAAGACCTTCGTCAACCTGCAGAACCTGAAGCAGCACTTCCGCATCCACACCGGCGAACGGCCGTTCGAGTGCGGCGAGTGCGGCAAGCGGTTCACGCAGAGCGGCAGCCTGCACGTGCACGCGCGCACGCACAGCGCGCGGGAGCCGCACGAGTGCGCGGAGTGCGGCGCGCGGTTCAAGCTGCGCGCGGGGCTGGCGCGCCACCGGCTGCGGCACTCGGGCGAGCGGCCGCACGCGTGCGCCGTCTGCGGCAAGCGCTTCCGGCAGCGGCACGACCTCACCGCGCACGCGCGCCTGCACTCGGACGCCAAGCCGCACGCGTGCGCCGCCTGCGGGGCCGCCTTCCGCCAGCGCAAGGCGCTCCGCCACCACTGCAAGCGCTTGCACGAGACCGAAGCGCCCGCCCCCgtccccgccgcccccgccctcGCCGCCTCCGCGCCGGCTGTCCCCGGCGAGGCGGCGCCGCCACAGCTCGCCTATAGTCACGTACAGCCCTTCTACAAAATATTGccttaa
- Protein Sequence
- MSANCNASVPEGPPIVSPLVMVEPVKLKIRYPDLITPDRLAVRDDYNNICRLCAAETTNPIPLFKGEGAKYDIPGKIRKYMSLRVLASELMPQTVCPPCASTLLSWHELVRSARLADFMLRRKLGASRALPIPSPPPRADGTEIIKNGVKCESPALLISVVKDVLTNYFHSLNIEGDNADFEYVCQKCDATSVGNRIEDLTEHLTTTHAAAVDCKESVEDFIRSNITFEENLMMEEFVDSDGDARSERDPSEVALPQFWCPHCSSIFSSPTRLLCHLGKHVDVDDEAGVACCGAVYSDRAALASHLRARHERLAPTGTICRTCGFSADDDGILQDHIDRVHVEARANSAERDKRKTSSGQKYIRVECPECNKMFSNKYNMAVHLRSHRARPGKFTCETCARSYRSRGSLTQHRRVVHEGELRHVCAACGEGFPSRLARDVHARLHTGHRPYSCHFCDKSYRARNTLDRHLEMHLDVRKFSPTLQVDLRRSGPTRRESPTECSDPIDWPDEPDRVGDSFSEDDVPLSSIATKKSTELYDRLFAALVNFKEHVASEHESPECSYPDFTESSESEGDGNEEADASGYDDLTRSNMRKDRMDERTRLELSEARTELGGKVFYTCWACGKNLSSSHTYLFHKRIHTGERPCVCHVCGKQFRAPGGLQRHLTETHERLRRYSCDLCPKTFVNLQNLKQHFRIHTGERPFECGECGKRFTQSGSLHVHARTHSAREPHECAECGARFKLRAGLARHRLRHSGERPHACAVCGKRFRQRHDLTAHARLHSDAKPHACAACGAAFRQRKALRHHCKRLHETEAPAPVPAAPALAASAPAVPGEAAPPQLAYSHVQPFYKILP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01439252;
- 90% Identity
- iTF_01439252;
- 80% Identity
- -