Tact028864.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638236.1:9089602-9092517[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.74 69 5.1 0.2 5 23 350 368 349 368 0.95 2 11 0.0063 0.6 11.6 0.4 3 23 376 396 374 396 0.94 3 11 1.2 1.1e+02 4.4 0.3 2 23 404 425 403 425 0.91 4 11 7.5e-06 0.00071 20.8 1.2 2 23 430 451 430 451 0.98 5 11 0.0035 0.33 12.4 4.1 1 23 457 479 457 479 0.99 6 11 7.6e-05 0.0072 17.6 0.6 1 22 483 504 483 504 0.94 7 11 0.00016 0.015 16.7 0.1 1 23 537 560 537 560 0.96 8 11 1e-05 0.00096 20.4 0.3 1 23 582 604 582 604 0.98 9 11 0.00013 0.012 16.9 3.4 1 23 610 632 610 632 0.98 10 11 0.0029 0.27 12.7 0.3 3 23 640 660 638 660 0.98 11 11 6.2e-06 0.00059 21.0 0.7 1 23 666 689 666 689 0.96
Sequence Information
- Coding Sequence
- ATGGATTCCTGGGCGAATTTGTGTCGATGCTGTCTATCCCCCGAAGCGGGAGTGTCATTGTATGACGAAAAGCAAAACGTGAAAGAAAAATTCTACGAACTAACTACTATTGAGGCAAATGAAGATGATGGATTGCCGCAGAAGTTATGTGTGGAGTGTTTCTCAGTACTAAATTCAGCATACCAATTCAGAGTACAGTGTATGAAGATGGATAAAGAACTAAAACTACAACTGGTTGCTATGACAAAGGAATCTAAAACCGAATTTACATTAAACTTGCCTGAAGTTAACGAAAATGGCAAAGAATTGACAGTGGATGATATAGCCAAAGAATCTATGAAACAAATTGAGGCAATGATTAAAACTGAACCCACTGATAGTGATGATGAATGCTATTATGTACTTGTCATTGATGACCCAAAAGATAATGATAAAGAGCAGGAACAAactgtacataaaataaaaaaagaacctcGGGAAACACCTATTAATAAACAACTTACAGACATAAAACAAGAGAATCCAATGTTTGAAAATAGCATTGATTCTTTCTTAAATCCCAGGGTACCACTCAGTGTACCCGCAACTATTCTTGAGAATGAGGAAGAATACCATGAAAATGATGAGGAAACGGAGATGAACATTGATGATGAAGTTGATGAAACAACACAAGATCAAATTTTAGCAGAAATTGATGACTCCCAACTCGGTGACAATCAGCAACTAGTGCAACTTGGCAATGATATCATTGTGAAAGATATATCAAGCTCCAAAAacattatcaaaatattaaccACATCAGGTTCAGAGAGAACAATACTACTTGATAGCAATGAAAGCATCAAATATCTTACAGATTCACAATTAGACTCTGTTGATGATGAGGATTCTAACACTCAGGAAGAATTCATCTTTTATGACGCTGATGATACATCAAATTTTCAGATTTTGAAGTGTGATGGCTCTGAACTAGTCATTGAATATGCTGATGAAAATCAATTATCTTCATCGACAGTCCTAAAACAAGACGATGGATCGTATTTGTGTGGTTGTGGCGAAAAATTTGAAGACTTAGAGGTCTATGAGAAACATAAGAGTAAACATAATCCTGGTGGAGAACATTTGTGTAATCTTTGTGGGAAGGGATTCGAAACCTCCGAAATTTTAACTGGACACATGCTTCTACATACAGTGACTGGAACCTTTGTTACTTGTCCGTTTTGCAATCAACTTATCAGGAGAAATGCTCTCACGCAGCATATTAAATATGGGCACAATAAAAAGCCACGCTGCAACTTGTGCTTAAAGACTTTCGCAAATCTGAATAATCTAAAGCGCCACATGATGATCCACACAGGAATCAGAGAGTTTCAATGTGATATCTGCTTGAAGAGATTCCATCAAAAAATCACTATGCAGACACATAGACTCACACATATTAATCCATTCTCCTGTAATCAATGCGATAAgacttttgaaaataaaaatgaactagTAGAACATAAGCAGACAGATCAGTGCAGCAAATCCAAAATCAGCAAAGTTAGGgaagaattaattaaaacagtaaAGCAGGAAATTACTACTGATACTGGAAAACTCTTGGGTTATGCATGCTCACTTTGTAAAAGAATGTTTTCAGTAGAATCGGCCTTGGAGCAACATATTGAAAGCTCCCACATGGTTGAAACAGGAGACGTACAAAACTCTGACAAGAATGTACGAGGAAAGCATCTTAAGAGATTCGAGTGTAGCATATGTGGAAAGAGTTGTGCCAGTCAGGCAATGCTTATCATGCACGAAAGGGTCCACACCAATGAAAGACCATATCCCTGCCAACTATGTGCATTACGATTCAAAACTAAAACACATTTACGTACACATCAACTTACTCACACAAGGGAAAAGAAGTTTGGTTGTTCAGTATGTATGAAGTTCTTTGCTCTAAAAGGGAACTTAGTTGTGCATTTAAGAACACATACAGGGGAGAGACCGTATGTGTGCTCTATTTGTGGAGAGGCCTTTATTGACTCCAAGTATCTCAAAAAGCACAAGTTGAAAAAACATGCAATAGATAATGTTCATTGGAATAAGTATGTTTAG
- Protein Sequence
- MDSWANLCRCCLSPEAGVSLYDEKQNVKEKFYELTTIEANEDDGLPQKLCVECFSVLNSAYQFRVQCMKMDKELKLQLVAMTKESKTEFTLNLPEVNENGKELTVDDIAKESMKQIEAMIKTEPTDSDDECYYVLVIDDPKDNDKEQEQTVHKIKKEPRETPINKQLTDIKQENPMFENSIDSFLNPRVPLSVPATILENEEEYHENDEETEMNIDDEVDETTQDQILAEIDDSQLGDNQQLVQLGNDIIVKDISSSKNIIKILTTSGSERTILLDSNESIKYLTDSQLDSVDDEDSNTQEEFIFYDADDTSNFQILKCDGSELVIEYADENQLSSSTVLKQDDGSYLCGCGEKFEDLEVYEKHKSKHNPGGEHLCNLCGKGFETSEILTGHMLLHTVTGTFVTCPFCNQLIRRNALTQHIKYGHNKKPRCNLCLKTFANLNNLKRHMMIHTGIREFQCDICLKRFHQKITMQTHRLTHINPFSCNQCDKTFENKNELVEHKQTDQCSKSKISKVREELIKTVKQEITTDTGKLLGYACSLCKRMFSVESALEQHIESSHMVETGDVQNSDKNVRGKHLKRFECSICGKSCASQAMLIMHERVHTNERPYPCQLCALRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKLKKHAIDNVHWNKYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887630;
- 90% Identity
- iTF_01439265;
- 80% Identity
- -