Basic Information

Insect: Thymelicus acteon
Gene Symbol: zfh1
Assembly: GCA_951805285.1
Location: OX638238.1:5095472-5109796[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1 94 4.7 0.5 2 23 236 257 235 257 0.92

2 13 0.00036 0.034 15.5 3.3 1 23 355 378 355 378 0.98

3 13 4e-06 0.00037 21.7 4.6 1 23 382 404 382 404 0.98

4 13 0.26 24 6.5 0.1 2 23 412 432 411 432 0.88

5 13 0.0028 0.27 12.7 1.4 1 21 438 458 438 463 0.94

6 13 0.0001 0.0094 17.3 3.9 1 23 471 493 471 494 0.96

7 13 0.014 1.3 10.5 11.1 1 23 500 523 500 523 0.98

8 13 1.7e-05 0.0016 19.7 0.5 3 23 534 554 533 554 0.97

9 13 5.7e-05 0.0054 18.0 0.4 2 23 561 583 560 583 0.95

10 13 7.2e-06 0.00068 20.8 1.2 1 23 608 631 608 631 0.97

11 13 0.00077 0.073 14.5 4.2 1 23 637 660 637 661 0.97

12 13 3.3e-05 0.0031 18.8 0.3 3 23 672 692 671 692 0.96

13 13 0.00012 0.011 17.0 1.5 3 23 700 721 698 721 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1	94	4.7	0.5	2	23	236	257	235	257	0.92
2	13	0.00036	0.034	15.5	3.3	1	23	355	378	355	378	0.98
3	13	4e-06	0.00037	21.7	4.6	1	23	382	404	382	404	0.98
4	13	0.26	24	6.5	0.1	2	23	412	432	411	432	0.88
5	13	0.0028	0.27	12.7	1.4	1	21	438	458	438	463	0.94
6	13	0.0001	0.0094	17.3	3.9	1	23	471	493	471	494	0.96
7	13	0.014	1.3	10.5	11.1	1	23	500	523	500	523	0.98
8	13	1.7e-05	0.0016	19.7	0.5	3	23	534	554	533	554	0.97
9	13	5.7e-05	0.0054	18.0	0.4	2	23	561	583	560	583	0.95
10	13	7.2e-06	0.00068	20.8	1.2	1	23	608	631	608	631	0.97
11	13	0.00077	0.073	14.5	4.2	1	23	637	660	637	661	0.97
12	13	3.3e-05	0.0031	18.8	0.3	3	23	672	692	671	692	0.96
13	13	0.00012	0.011	17.0	1.5	3	23	700	721	698	721	0.95

Sequence Information

Coding Sequence: atggatGAGTTTTGTGAAGCCGATATTAGAACTTTATGCTGTACGTGTTTGAGCGTCGACCGAAAACTATTTCAACTATGCAGAATACATGATGGTGTAAACAATTTGTACTGGCTACTTTCTCATGATTTAGAGGCTTATAAAGAAGGGTTTTTCAAAGATTCTACAAATCTATTTATATGCTGGGAATGCAAAGCGCTGATGTCAAGAATATGTTTGTTCAGAAAACAAGTGTGCATAGCACAAAAACAGCTTTCTAGTATTGAAGAGGGTAGGATACAGCTAAATAGTCAAAAAAGTCTATCAAAGCTGTCTACTACAGTAAAAAGTTCATATGATAAAGAGCAATGTTCGATAAAAGATGTAGACGATAAATACATATTCATAGACTGTGGAGTTGTtgctaataatattaaaacagaaGAATCTGATGATGAGGATATACCATTATCTGAGTTACAAAATTATTCAGATGACGAAGTAAAACAAGAAGAAACTGAGACAGAAAATGTTGAATACGATACAAAAACAAAAGAAGATGTagttagaaaaagaaagagataTCCAATAAAGAGAAAGAGGAAAACTGATCCTAATTCCGATGAGTATAAGGAGTATTATACAACAACACAAATGACAGAGGAGGAAATGCTTGAAAGTAGGGAAAAGAGGAGGCACGCACCTGATTATATGGACGCACCGAACAAATGTGAGTCTTGTATAGAAGGGTATAAGAGTGGAAGTAATTTGGAGAAACACAAGACCTTGCATGTACCGCGTCGCAAAACCACTCAGTGCTCAATATGTCTCCTGTACGTAAGCGCAGCGGAAGCAGACGAGCACAAAGACGCTCATTACGCGAGACACGGCTGCAACTTCTGCGCCTTTACAACGTGCGATAGCCTGGACATCCTACGTCATTTGAAGAAGAGTCACAACATGCGAAATGTCGTCGTGCCTAAACGGTTTAAAAAGGGTGAAAGAAAAACCCCCTTCACAAAGAACCCCGGGTCTCGACCGCGGCTTAACAAGGCTATGAGAGACAAACCCACCCCGCTCGGGTATAGGTGTTCCGACTGCGATAAATACTTTGAAGACAAAAAACAAAGATGGGCGCACATACAGAAATGTCATCGAGAAGGATTCAAATGTGGAACTTGCGGAAAAAGATTTTCGTTCAAAAATCATTTGCAGAAACACGAACGCATCCACCAAGGCCCCCCCCAGCGCTCCCAGTGCCCGAAATGCGGCAAGATGATACAAGTGGCGTTACTGTCAACGCACGCGAAGCTCCACGAGCCACGCCGCTCGTACACCTGCACCGCGTGCAACAAGCATTTCGTCTCTCGCGAGTCGTACGAGGTGCACCTGAAGTACACGCTCGTGCACGCCAAGGTCGACATACTCAAGTTCAAATGTACCATGTGTGATAAGGGTTTCCGAACGCGCTTGGAGCTTCGTGACCACACCAACTACCATCATTTGGGGCAAACGCAGTATAAATGTCATATATGTCATAAGCCGTTCTCGAGTCACAAGTGCTACATCTACCACGTGCGGCGGACGCACGAGGGCCTGCGAGACAAGAAGGATAAGATTTGTCAACAGTGTGGGAAGGCATTTAATAACAAGAAAGGTCTTCGGGAACACGAGAGAATTCATACCGGTGAACGGCCCCTGTCGTGCGAGATCTGCGGCGCAACGTTCAGGCAAAACGCTTCATTGTACACGCACAAGAAGAGGGTACACAACATATACCCTGCCAGCAGACGAGAAGTGCAGGTGCTTGAGAGCGTCCCCGAGACAGGGGTACCGCTGACATACAAATGTGATAAGTGTGAGAAAGGCTATCGCTCTAAAGGGGAGCTCCGGGATCACATGAACTACAACCACATGGGGACAACGCGACACAAGTGTCCTATCTGCGATAAGCCTCTAGCCACTCGTCGGTGTATCACAAGACATATAAGACGCGCTCATCATGGGATAAAAGAAAATGCGAGGGATAAAATATGTCAGAAGTGTGGAAAAGCGTTCAGGGATAAAAAAGGTCTCCGAGAGCACGAATTGATACATACAGGCGAGCGCCCCCTAGCGTGCGAGATATGCGGCTGTACTTTCAGACAGAGCGCCTCTCTGTACACACATAAGAAAAGAGTGCACAGTGTATATCCGCAGAAGAAATCGGTGGAAATATTGGACAAGGATGATAACCGAtga
Protein Sequence: MDEFCEADIRTLCCTCLSVDRKLFQLCRIHDGVNNLYWLLSHDLEAYKEGFFKDSTNLFICWECKALMSRICLFRKQVCIAQKQLSSIEEGRIQLNSQKSLSKLSTTVKSSYDKEQCSIKDVDDKYIFIDCGVVANNIKTEESDDEDIPLSELQNYSDDEVKQEETETENVEYDTKTKEDVVRKRKRYPIKRKRKTDPNSDEYKEYYTTTQMTEEEMLESREKRRHAPDYMDAPNKCESCIEGYKSGSNLEKHKTLHVPRRKTTQCSICLLYVSAAEADEHKDAHYARHGCNFCAFTTCDSLDILRHLKKSHNMRNVVVPKRFKKGERKTPFTKNPGSRPRLNKAMRDKPTPLGYRCSDCDKYFEDKKQRWAHIQKCHREGFKCGTCGKRFSFKNHLQKHERIHQGPPQRSQCPKCGKMIQVALLSTHAKLHEPRRSYTCTACNKHFVSRESYEVHLKYTLVHAKVDILKFKCTMCDKGFRTRLELRDHTNYHHLGQTQYKCHICHKPFSSHKCYIYHVRRTHEGLRDKKDKICQQCGKAFNNKKGLREHERIHTGERPLSCEICGATFRQNASLYTHKKRVHNIYPASRREVQVLESVPETGVPLTYKCDKCEKGYRSKGELRDHMNYNHMGTTRHKCPICDKPLATRRCITRHIRRAHHGIKENARDKICQKCGKAFRDKKGLREHELIHTGERPLACEICGCTFRQSASLYTHKKRVHSVYPQKKSVEILDKDDNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01439375;
90% Identity: iTF_01439375;
80% Identity: -