Tact024663.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638232.1:628210-630397[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 4 3.8e+02 2.8 0.5 2 23 72 92 71 92 0.82 2 12 7e-05 0.0066 17.7 0.1 1 23 98 121 98 121 0.96 3 12 2.8e-06 0.00026 22.2 1.6 1 23 127 149 127 149 0.96 4 12 4.1e-05 0.0039 18.5 0.0 1 23 155 177 155 177 0.99 5 12 4e-05 0.0038 18.5 0.0 1 23 183 205 183 205 0.97 6 12 0.0018 0.17 13.3 1.3 5 23 214 232 211 232 0.96 7 12 0.00018 0.017 16.4 0.7 2 23 458 480 458 480 0.96 8 12 1e-05 0.00098 20.4 0.3 1 23 486 508 486 508 0.96 9 12 1.7e-05 0.0016 19.7 0.5 3 23 516 536 514 536 0.96 10 12 0.0028 0.26 12.7 0.8 3 23 544 564 542 564 0.95 11 12 9.3e-05 0.0088 17.4 2.9 1 23 570 592 570 592 0.98 12 12 0.0012 0.11 13.9 1.7 1 23 597 620 597 620 0.94
Sequence Information
- Coding Sequence
- ATGAATTCAGTCCTCGTCTTGTTAACGTGTGCATACTTTGCCAGTGAAAGCTTAAACTCATCGTCGTCTATCAATGAAACGGAGGAGGGTCCGACACGATCAAGCGAAACACAAAAACCGATTCGCGAACCATCACCGACCGAGGAATCGAAGGAGGCCGAGGTCGCGGAGAAGCCCAGGGTGCTCGTCACCGAGAACGGAAAACGATACGTGTCATGCGGCACGTGTCACAAGAACGTGGCGAGCGCGTCGTGGCGGCGGCACGAGCGCGCGCACCGCGGCGAGCGGCGCTACAGCTGCCACGCGTGCGGCGCCGCCTTCGCCGACAGCGGCAACCTGGCCCGCCACGCGCGCGCTCGCCACGCCCTCCTGCGCCCGCACGCCTGCGCCGACTGCGGCCGCGCCTTCGCCCGCAAGACGCACCTGCAGGACCACGTGCGCTCGCACCGCGACGCCCGCGACTACGTCTGCGACGTCTGCGGGAGGGCCTCCAAGTCGGCCGCCGCGCTCCGCATGCACGCGAGGACGCACGCCGCGCCGCGCAGCTTTCCCTGCATGGAGTGCGGGGCGCGGTTCAAGCGGGCCGGCGAGCTGCGCGCGCACGTGACGGTGCACACGGGCGAGCGCGCGCACCGCTGCGGCTGCGGTCGCGCCTTCCGACTGCGCGGCCAGCTCACCGCGCACGCCCGGACTCACGCCGCGGGCTCGAGCGGCCGGACTGATGGCCGCTTCCTCGTCGGCGACAAGGAACGCAAGGTGGTCTGCCGCTGCGAGGAGTGCCACTCCTACATGGACAAGGACGACCTTCTGTTCCACATGAACAAGCACGCCCTCGATCGACTCTCGGATCACGTGAAGGCAGAGTACCACCGAAACAAGAAGGCCATCCTCGAGGAGCAGGCGAAGATCGACGCGCAGGCCCGAAGCGAGCTCGACAACCTGAACGACTACTTCCGCAGAAAGGAGGCGGAGCAGGCGGCGGGCCCGCGACGCTCGGAGCGGACCGCGGACGAGCGCCAGTCCGCTGGGAGCGACTGCACCGGCGAGCCGGCGAGCGACGGGCCGCAGCCCGTGAAGAGGAGGAGCTCCAAGCGCACGAGCGACGAGGGCTGCCAGGAGCGAAACTCCGACGGGGAGCGGCCCGAGCGGTCGCCGCCAAAGCGGAGGAGGGTCGAGCCGAAGCAAAGCTCGGAGGCGGAGCGCTCGCCGTTGAAGCGGCAGAAGAAGAGGAGGGTCCTCGCTGCCAAGGGCGGGCAGCGGGCGAGGGGGCTCCCCGACCGGGAAGAGGACGAGGTCGACGCCCCCGAGGCCTCCCCGGACGCGGGGACGAGCAAGCCGAAGGTCGCCAACGAGTCGCCCAAGGCCTCCCGGACGTGCCCCATCTGCGGGAAGCAGTACCGCGCCTCTTCGAGCTACTTCTACCACATGAAGTACTTCCACAAGCGCAGCCGCGAGCACGAGTGCCCCGTGTGCAACAAGAAGTTCGGCACGAAGGCCGACCTGGCGCGCCACGCGAGCATCCACACGGGCGCGTACGACCTCGCGTGCAAGGAGTGCGGCAAGCGGTTCAAGACGAAGCCCAGTCTGTACATCCACGAGCAGAGCCACGGCGGGCCCAAGCGCTGGGCGTGCGCGCTGTGCGGCCGCTCGTTCCGCTGGCGCACGCACCTGGCGCGCCACGTGACGCGGCACGCGGGCGAGCGCGCGCACGTGTGCAGCACGTGCGGCCGCGGCTTCAGCGTGCGCTGCGACCTGCTGCGGCACGCGCGCACGCACGCCGCCGACGAGTACCACTGCGCCACGTGCGGCCTCAAGTTCGCGCAGAAACGCTACCTGCAGGTGCACGTGGTCAAGAAGCACCCCGaggcgcccgcgccgccgccgcccgccgtcACGCGCTCCTGA
- Protein Sequence
- MNSVLVLLTCAYFASESLNSSSSINETEEGPTRSSETQKPIREPSPTEESKEAEVAEKPRVLVTENGKRYVSCGTCHKNVASASWRRHERAHRGERRYSCHACGAAFADSGNLARHARARHALLRPHACADCGRAFARKTHLQDHVRSHRDARDYVCDVCGRASKSAAALRMHARTHAAPRSFPCMECGARFKRAGELRAHVTVHTGERAHRCGCGRAFRLRGQLTAHARTHAAGSSGRTDGRFLVGDKERKVVCRCEECHSYMDKDDLLFHMNKHALDRLSDHVKAEYHRNKKAILEEQAKIDAQARSELDNLNDYFRRKEAEQAAGPRRSERTADERQSAGSDCTGEPASDGPQPVKRRSSKRTSDEGCQERNSDGERPERSPPKRRRVEPKQSSEAERSPLKRQKKRRVLAAKGGQRARGLPDREEDEVDAPEASPDAGTSKPKVANESPKASRTCPICGKQYRASSSYFYHMKYFHKRSREHECPVCNKKFGTKADLARHASIHTGAYDLACKECGKRFKTKPSLYIHEQSHGGPKRWACALCGRSFRWRTHLARHVTRHAGERAHVCSTCGRGFSVRCDLLRHARTHAADEYHCATCGLKFAQKRYLQVHVVKKHPEAPAPPPPAVTRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -