Tact006088.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638214.1:17814159-17823365[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.037 3.5 9.2 2.3 1 21 72 92 72 93 0.96 2 35 0.6 57 5.4 0.7 2 23 165 186 164 186 0.96 3 35 0.026 2.4 9.7 0.1 1 23 190 212 190 212 0.95 4 35 0.059 5.6 8.5 0.4 1 20 217 236 217 240 0.77 5 35 0.0063 0.59 11.6 0.3 1 23 246 269 246 269 0.95 6 35 0.00047 0.045 15.1 0.9 1 23 276 299 276 299 0.98 7 35 0.0013 0.12 13.8 2.5 1 23 306 328 306 328 0.98 8 35 2.5e-06 0.00024 22.3 0.8 1 23 334 356 334 356 0.97 9 35 5.4e-05 0.0051 18.1 0.4 2 23 360 382 359 382 0.96 10 35 2.1 2e+02 3.6 0.1 1 23 445 467 445 467 0.92 11 35 1.4 1.3e+02 4.2 0.1 3 23 493 514 492 514 0.95 12 35 0.0063 0.59 11.6 2.2 1 23 536 558 536 558 0.98 13 35 0.016 1.5 10.3 6.8 1 21 562 582 562 584 0.95 14 35 0.0028 0.26 12.7 0.2 1 23 589 612 589 612 0.93 15 35 0.002 0.19 13.1 0.4 1 23 618 641 618 641 0.95 16 35 0.19 18 7.0 0.3 1 23 647 670 647 670 0.97 17 35 0.061 5.8 8.5 0.1 1 23 717 739 717 739 0.93 18 35 7.6 7.1e+02 1.9 0.0 2 23 763 785 762 785 0.93 19 35 0.014 1.3 10.5 2.6 3 23 809 829 807 829 0.96 20 35 0.012 1.1 10.8 1.9 3 23 835 855 834 855 0.97 21 35 0.026 2.4 9.7 1.2 1 20 861 880 861 884 0.88 22 35 0.00064 0.06 14.7 1.2 1 23 890 913 890 913 0.92 23 35 0.18 17 7.0 2.7 1 23 919 942 919 942 0.96 24 35 0.00025 0.023 16.0 0.4 1 23 948 970 948 970 0.95 25 35 8.6e-06 0.00081 20.6 0.5 1 23 976 998 976 998 0.99 26 35 0.00042 0.04 15.3 4.8 1 23 1004 1026 1004 1027 0.96 27 35 0.36 34 6.1 0.4 3 23 1159 1179 1158 1179 0.96 28 35 0.47 44 5.7 6.7 1 23 1202 1224 1202 1224 0.95 29 35 0.0011 0.1 14.0 1.2 1 23 1228 1250 1228 1250 0.98 30 35 0.0007 0.066 14.6 0.1 1 23 1255 1278 1255 1278 0.96 31 35 0.00039 0.036 15.4 1.3 1 23 1284 1307 1284 1307 0.98 32 35 0.04 3.8 9.1 1.1 1 23 1314 1337 1314 1337 0.97 33 35 0.00016 0.015 16.6 1.8 1 23 1343 1365 1343 1365 0.97 34 35 4.4e-06 0.00042 21.5 1.1 1 23 1371 1393 1371 1393 0.99 35 35 4.6e-06 0.00043 21.5 2.7 1 23 1399 1421 1399 1422 0.96
Sequence Information
- Coding Sequence
- ATGAGAAATATTTGTCgaGCCAGCACACAAAACGAGCCTGAAACTGCGCTTGTGACTAAGAAAGACATCTTTGTGTTCGAAGAGTCGCATGGGACAGAAAAGCGGCCCTATCGAAGAAGTGCCAGAGCGGAGGCTAGATTCGTCACAAAGAAAAACGCCCATGCCATTTTAGAATGCTGGTCGGTTTGTCCATTCCGATGGAAAAAGAATAGATTTAAATGCGCTTATTGTGAAGACAACTTCACTGACTGTTCTGATTTGAGGGACCACGTCAGACATTGTTCTACACAACATAGCGTTAAGGACATATACAGCAAATTCAAGGAGATGACTCTGATCAATGTCGATATCACCGCTACTATATGTAAACTTTGCGCTTTACCTTTTTCTACTGTCACCGAAATGGGAGAGCATGTTGTCGAGCACGGTTTCGATTTCGATTCGGCTCATCCAGACGGAGTACTGCCATTCGCGTTAGACAAGGAATCTTGGCGCTGTGTCATTTGCCAGGACAAATTTAATAACTTTCTCAAATTGTACGAGCACATGAACAGTCACTATCAACATTATATTTGCGCGACATGCGGCAAGGGATACATGACAGCACCAAGATTGAGGAAACATTCCGAGGTCCACATAAGTGGTTCATTTCCCTGTGATAAATGCGGGAAGAATTTCACGATGCGCGCCGCAAGAGATTATCACAAAGCTTCCGCTCACGCCAAGGGTCCTAGATACGAGTGTCCTCAATGCGACATGCGGTTTACGGGCTACTACGAGAGAATGAACCATTTGAATGAAGCTCACAGGGAGAAAGAAGTGACGTACAGTTGTACGTACTGCGAGCAAACCTTCAAAACGAGCGGCAAACGAGCGATTCACGTGCGAACGGTCCATTTCCCGCAGCAACGAAGTTTTCCCTGCCATTTCTGCAACTCTCAATTTAAAGCTGCATACGAGCTTAAACGGCATATGATCAAACATACCGGCGAAAGGAACTTTGCGTGTACGGTGTGCGAAAAAACGTTTCCACGGAGCAAAGCATTGCGAAATCACCTGAAAACCCACGGTGATCTGAGTTGCAAATGGTGCGGTTTGATGTTCAAGCAAGAGGCGAGATTGTTTGCTCATATGAGAACGAATCATGTAGAATACAACAGTCTGGCCGAAAATTCTGATACGATTTTGGgatACGCGGACCTCAATGCACAAGAAAATAAGACAGTACAGATAAAATGGAAAAAGAAAAGGAGGGTGATGGGTGAGAAAGCGAACGCTGCTTTTATTCTGGAACACTCTAATGCGGTGGCTTTTAGATGGATGCGGGGGAAGTTTATGTGTGCGTATTGTCCGCAAATATATCCAAACATTAACGAAATTCGTCTACATTCCGTCACACATGCTAAGATGGAGCTGTTTGAAAAACCAGAAGTCCGCAACTCGTTTCCATTGAAGGTTGATATAACTGATCTACTGTGTTCCATTTGCCAAGGCGCAGTCGAAAATTTGATCGAGCTCAAGAAACATTTACAGGAGAAGCATTCGAAAACCACCGATGAAGAGTACAGCGATGGAGTAGTACCCTTCGTATTGACTAGCAAAATTTTCAGATGCGTGCATTGCGGTATACATTTCGAAGGATTTATGAGCCTGTTTATTCACATGAACGTGCATTATCAAAGCTTTGTGTGCCATACGTGCGGTAAGAGTTACTCTGGTGAACATAAGCTGAGATCCCATCAGAAATGCCACGAGGTTGGACAGTTCCCGTGTCCGAAGTGTGAGATGGTGTTCAAAAATCGTGTGTTAAAGAATCGTCATTTAGCTTTAGTTCACGGTCCCAAGAAGAGATACCGATGTCCCatctgtgatttgacttttgaTTCGTACCACGCAAGGCTAAAGCATCTTGCGGTGGTGCATGGACAGAAAGCCGAGTACCGCTGTACTTTATGCCCCTCAGTGTTTGGTAGTGGAACGTCGAGGTACTCTCATATGCGGATAGTTCATAAGAAGCAAAGGCCTGATCAGACCCCTAAGTGGATACGCAAGTCGACAAGGCAACGCAAGTATGACGATCAAAGAGATAATGCGGCAATTATATTAGAGTTTTCAAACGCACTTCCCTTTCGGTGGAAACGAGGGACTTTTACCTGCGCGTTCTGTCCACAGTCATTCGGAGACTTTGCAGGTCTCCAAACTCACTCGGCTGAGCATCCTAATAAAATGGAAGCTATGCGACTAGCCAGGCCCTGTGACAACGTCAAAATAGAAATTAGTAACCTTCGTTGTGAGATATGCCTCCAGAGCATGAAAAGTCTAGACGCTATCAGGGATCACTTAATAATAGAACACGCAAAGCCAATCATAAAAGATCAGGGAATCGGTGTAACTCCcttttacttaaataataagGAAATGATTTGTACCCACTGCGATGAAAAATTTGAGCTATTCACCAAGCTAAATACGCACATGAACCAACACTATCCAAATAACATATGCTGTCATTGCGGCAAAGCATTTGTTGCAGCTCAAAGGCTTAAATCACATCAACTTATCCATGAATTAACCGACCATTATAAATGCACGAAATGCGATGAGGTCTTCCAAACGAGGACGCTCAGAAACAACCATTTTGTTTTGGTTCACGGTCCCGAATGTAGATATAGATGCCCATATTGTAATGAATCGTTTAAAAGCTATTCGGACAGAGGGAGGCATTTGACGGAGTCCCATGGGAAGAAAATTGAATACCCTTGTCATTTATGCTCTGCTGTTTTTGCTATGTGCAATCAAAGGACCAAGCATATAAAGCAAGTCCACATTAAGCACAAGACATTTCTCTGTGAATTTTGTCCCTACAAGTTTGTTACCGCTGCGCAGTTGAGAAGCCATATGGTGAAACATGTAGGGGAGAGAAAGTACCAGTGCGAGGTTTGCAAGAAAGCGTATGCAAGGGTCAAGACGCTAAAAGAGCACATGCGGATACATAACAATGATAAGAGATTCGTTTGCGAGTATTGTAATAATGCCTATGTTCAGAAATGTAGTCTGCAAAGTCACATGAAGACGCACCATCCCAACGCAGAACCTTTGAAGAAAATCAAATTAACCAGTTatcgaAGAAAAACTGCAGAAGAACAAATAAATGAAGTGGAATGTGCAGATAAAAATTTGGCTGCGCTACTTACTTCTGCTGAGCTGAAACTTTCAAAGAAAGAAGAGGTGAGACATAGAACCAGCGAAGGAAATGAAAGGAGAGCTACGTAtaggaaaaatataaaattaattatgagtTCTTGCACCGCATATCCTTTCAAATATAGAAAAGGAGCGTACCTGTGTTTCTTCTGCAAATGTACTTTCTTGGAGCCAGATAAAATGAGGGAACATACATTACAACAGCACGCTGACGTAACGTTCAAACCCAGAAAATATGAACCTCTGAAAATGGATTTTGCCATGGCTATTTGTAAATTGTGCGGTTTTCGAATTGATAATTACAACACACTAAAGTTACATTTGATGGATCATGGCAAGGCTATCGACCCCTCACACGGTGAGAATATAATATTGCCTTACAAGCTAAGCAGAGAGGAACATTGTTGCCAAGTTTGCGGTAAAAGATATGAAATGTTCCTAAGTCTCCATAAGCACATGAATGATCATTACGAGCATTTTATATGTGAAACATGTGGAAAACGCTTCGCAACGATGCAGAGAATGCTGAACCACACTAGAACGCATGAACGCGGTGATTTTCCTTGTAAACAATGCGGTGAAACACTGTCTACGTATGCGTCTTTATATGCCCACATTGCTAAGGTCCATCGTTCCAACAAACGATACAAATGTCCAATCTGCGATGAAAAGTTTGTCACATATAAATTCAGGATGAAACATCTGAACACAGTTCATGGGGAAAAGACAGCTTCCTTTCCCTGCCCATCGTGCCCTAAAATTTTCGATCTTTGCAGCCGTCGAACAGCGCATATACGGTCAAGGCATCTTCAGGAAAGGAATCACGTTTGCAACGAATGTGGCATGAAATTTTTCACGAATTATGAATTACAGGAACATACGATTAAGCATGTTGGTGCTAGGATATATCAGTGTGATGTCTGCAAAAAATCTTACGCTAGATTGAAGACTTTGAGAGAGCACATGAAAATACACAATAACGACAGGAGATTTGTGTGTCCAGTTTGTGGGCAGACATTTATTCAGAAATGTAGTCTCAAACAGCATGTCAGAGTGCACCACCCAATGTTAATAAAAGATATGTTTTAA
- Protein Sequence
- MRNICRASTQNEPETALVTKKDIFVFEESHGTEKRPYRRSARAEARFVTKKNAHAILECWSVCPFRWKKNRFKCAYCEDNFTDCSDLRDHVRHCSTQHSVKDIYSKFKEMTLINVDITATICKLCALPFSTVTEMGEHVVEHGFDFDSAHPDGVLPFALDKESWRCVICQDKFNNFLKLYEHMNSHYQHYICATCGKGYMTAPRLRKHSEVHISGSFPCDKCGKNFTMRAARDYHKASAHAKGPRYECPQCDMRFTGYYERMNHLNEAHREKEVTYSCTYCEQTFKTSGKRAIHVRTVHFPQQRSFPCHFCNSQFKAAYELKRHMIKHTGERNFACTVCEKTFPRSKALRNHLKTHGDLSCKWCGLMFKQEARLFAHMRTNHVEYNSLAENSDTILGYADLNAQENKTVQIKWKKKRRVMGEKANAAFILEHSNAVAFRWMRGKFMCAYCPQIYPNINEIRLHSVTHAKMELFEKPEVRNSFPLKVDITDLLCSICQGAVENLIELKKHLQEKHSKTTDEEYSDGVVPFVLTSKIFRCVHCGIHFEGFMSLFIHMNVHYQSFVCHTCGKSYSGEHKLRSHQKCHEVGQFPCPKCEMVFKNRVLKNRHLALVHGPKKRYRCPICDLTFDSYHARLKHLAVVHGQKAEYRCTLCPSVFGSGTSRYSHMRIVHKKQRPDQTPKWIRKSTRQRKYDDQRDNAAIILEFSNALPFRWKRGTFTCAFCPQSFGDFAGLQTHSAEHPNKMEAMRLARPCDNVKIEISNLRCEICLQSMKSLDAIRDHLIIEHAKPIIKDQGIGVTPFYLNNKEMICTHCDEKFELFTKLNTHMNQHYPNNICCHCGKAFVAAQRLKSHQLIHELTDHYKCTKCDEVFQTRTLRNNHFVLVHGPECRYRCPYCNESFKSYSDRGRHLTESHGKKIEYPCHLCSAVFAMCNQRTKHIKQVHIKHKTFLCEFCPYKFVTAAQLRSHMVKHVGERKYQCEVCKKAYARVKTLKEHMRIHNNDKRFVCEYCNNAYVQKCSLQSHMKTHHPNAEPLKKIKLTSYRRKTAEEQINEVECADKNLAALLTSAELKLSKKEEVRHRTSEGNERRATYRKNIKLIMSSCTAYPFKYRKGAYLCFFCKCTFLEPDKMREHTLQQHADVTFKPRKYEPLKMDFAMAICKLCGFRIDNYNTLKLHLMDHGKAIDPSHGENIILPYKLSREEHCCQVCGKRYEMFLSLHKHMNDHYEHFICETCGKRFATMQRMLNHTRTHERGDFPCKQCGETLSTYASLYAHIAKVHRSNKRYKCPICDEKFVTYKFRMKHLNTVHGEKTASFPCPSCPKIFDLCSRRTAHIRSRHLQERNHVCNECGMKFFTNYELQEHTIKHVGARIYQCDVCKKSYARLKTLREHMKIHNNDRRFVCPVCGQTFIQKCSLKQHVRVHHPMLIKDMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -