Tact006002.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638214.1:17285381-17290952[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-09 1.6e-06 28.6 0.0 1 39 209 247 209 251 0.93 2 2 4.4e-08 4.1e-05 24.1 0.0 4 33 282 311 280 318 0.93
Sequence Information
- Coding Sequence
- ATGGAGTGTGATGAGAAAAAGAATATTCACATTGGTGTCGGTAATACTGGTGATGGTGATACCGATGTTGACGCACAGGTCCAAAATGAAAAGgAGAGATGCACGTGTTGCTTGCGCACAGATAATTTAAGGAGTCTTTGGCGGGAATTTTCTTATGGTGGCGTGACTGAGATCTATGGATCCATGTTGATGGAATGCTTTGCATTACCTTGGGACATTCCATCAGAACCAGATGAGAGCACAGACCAGATCTGCGTGCGGTGTATAGCGAGGCTGAGAGATGCCGTCAGCTTCAAGTCAGAGGTGCTGGTGTCCGCGAAGATTTTGAGTCATCGAGAGCTTGAAACGAAGATAAAACAGGAGATAGTAATAGATGTGAACATCGATATGGGGCTGCAGCCCGAGTACCTCAACGTAGGGTATGATGTGGATGATGACCGTGACCTCACGGGCACGGAGCTGGTCACAGTCGACGGGATTCATGATGTGAAACCTGGTGATCCTATAGATATAATCAAGATGGAAGCGATGCCAATAGAGCCAGCGAGGTGTAAACGCGTGCGGACCTCACCTCGACGGAGCACGCGGCCGAGAGAGGCTATACCCAAGAAGTACAAACGGTACACAGAGGAGCAGGTTCAGAAGGCCGTAGACGCGGTTAGGGGGAAGACCATGTCGCAGAACAAGGCTTCCAAAACCTTCAAGGTGCCTGGCAGAGTCCTGTCTAGGGCCTTAAAGAGTAATCAGGAAAATGGCGGCGATAACAAAACAGATTCCAAGGCACGCAAGCCTCGTCCTCGCAAGTCCCCCAAAGAGAAGAAGAGGCAGCTGTATCCAGAACAGAATCTTCTGCAAGCCTTCGAGGATGTGTGGAACAAGCGGATGACGCAGACGCAAGCTTCCAAGTTCTACAACGTTCCTAGATCCACCATCTTTGATTTAATCAGTAAAAACCTCGGCAAACCACGAAGAGGCGTGAGAACGAAAGCGAAAGAAGGTCCACAGGAAATGGAGAAGCACACGACGAACATTCTCACCATCATGGAGAACTCGAACGCGACGCCGATCCGTTGCCATGGCGACGGAGGGTACATGTGCTGCTTCTGCGACCACCAATATCAGAAGCCGAGCGACCTAAAGAACCATACATTATTAAGTCATGACTTCAAGACGAAGAAAACTATTACCAAAGGAAAACGACCGTCTTCATACTTCGTAAAGCTGGACATATCCTACCTGAAATGCACTATTTGCAACTCTGATATGGCGACCCTAGAAAAATTAATAGGACACCTAATAAATGACCATCAGAAACCAATGTACACGGATATCAAAAATCAGATCCTGCCGTTCAGATTCGAGAGTGCGGAATTGCAGTGTACAGTGTGTTCCAATGTATACAACAAGTTTAAGTTATTGCTAGAACATTTGAACGTGCATTACAAGAACTATGTCTGTGAAGAGTGCAACGCCGGATTCGTGTCGCGAATGATCCTCCACAACCATATTAGAGGACATAAGACCGGTGTCTTTACATGTGATGTTTGCCTCCGAGTGTATTCAACGCTCCGTAAACTAACTTACCACAAGAACTTAGTGCATACACATTCCTACTTAGTGAGCAAGTGCGGTTATTGTCATCAGAAATTCAAATCGTATCACCGTAAGCGGGAACATTTGATAGCGGTACACAATGTTGAACCGGAGACTTACACTTGTAAAGCTTGTAATAGGGTCTTCAATAGTCAAGCGTCTTTAAGAGTGCATAGGAAACGGGATCATTTGATGGAGAGGAAGTTTAAGTGTACGGAGTGTGATATGGAATTCTTTGCACGAGCTGAATTGAACGCTCATATGTTGAAGCATTCAGGACTGAGAGAGTTCCAGTGTGATGTGTGTCAGAAGTTGTTTAAGAGGAAGTTCACCCTAACAGAACATATGCGGATACATGAGAATAACTGCAGGTTTAAGTGTGAACAATGCCGGGTAGGGTTCGTGCAGAAGTGTAGCTGGAGGGGACATATGCGGAACAAACATGGGGTCATTATTTGA
- Protein Sequence
- MECDEKKNIHIGVGNTGDGDTDVDAQVQNEKERCTCCLRTDNLRSLWREFSYGGVTEIYGSMLMECFALPWDIPSEPDESTDQICVRCIARLRDAVSFKSEVLVSAKILSHRELETKIKQEIVIDVNIDMGLQPEYLNVGYDVDDDRDLTGTELVTVDGIHDVKPGDPIDIIKMEAMPIEPARCKRVRTSPRRSTRPREAIPKKYKRYTEEQVQKAVDAVRGKTMSQNKASKTFKVPGRVLSRALKSNQENGGDNKTDSKARKPRPRKSPKEKKRQLYPEQNLLQAFEDVWNKRMTQTQASKFYNVPRSTIFDLISKNLGKPRRGVRTKAKEGPQEMEKHTTNILTIMENSNATPIRCHGDGGYMCCFCDHQYQKPSDLKNHTLLSHDFKTKKTITKGKRPSSYFVKLDISYLKCTICNSDMATLEKLIGHLINDHQKPMYTDIKNQILPFRFESAELQCTVCSNVYNKFKLLLEHLNVHYKNYVCEECNAGFVSRMILHNHIRGHKTGVFTCDVCLRVYSTLRKLTYHKNLVHTHSYLVSKCGYCHQKFKSYHRKREHLIAVHNVEPETYTCKACNRVFNSQASLRVHRKRDHLMERKFKCTECDMEFFARAELNAHMLKHSGLREFQCDVCQKLFKRKFTLTEHMRIHENNCRFKCEQCRVGFVQKCSWRGHMRNKHGVII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438389;
- 90% Identity
- iTF_01438389;
- 80% Identity
- iTF_01438389;